RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 GORABQ5T7V8 394 aa10.81□□□□□ -0.68
USP6NL-203ENST00000443016 ITPRIPQ8IWB1 547 aa10.81□□□□□ -0.68
USP6NL-203ENST00000443016 MRIQ9BWK5 157 aa10.81□□□□□ -0.68
USP6NL-203ENST00000443016 A0A1B0GUL7 405 aa10.81□□□□□ -0.68
USP6NL-203ENST00000443016 SEMA3EO15041 775 aa10.81□□□□□ -0.68
USP6NL-203ENST00000443016 USP2O75604 605 aaPredicted RBP10.81□□□□□ -0.68
USP6NL-203ENST00000443016 TBC1D8O95759 1140 aa10.81□□□□□ -0.68
USP6NL-203ENST00000443016 PRDX5P30044 214 aa10.81□□□□□ -0.68
USP6NL-203ENST00000443016 TM4SF4P48230 202 aa10.81□□□□□ -0.68
USP6NL-203ENST00000443016 CCDC102BQ68D86 513 aa10.81□□□□□ -0.68
USP6NL-203ENST00000443016 HHIPL2Q6UWX4 724 aa10.81□□□□□ -0.68
USP6NL-203ENST00000443016 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.81□□□□□ -0.68
USP6NL-203ENST00000443016 MCOLN1Q9GZU1 580 aa10.81□□□□□ -0.68
USP6NL-203ENST00000443016 UNCXA6NJT0 531 aa10.8□□□□□ -0.68
USP6NL-203ENST00000443016 ZBTB48P10074 688 aaPredicted RBP10.8□□□□□ -0.68
USP6NL-203ENST00000443016 ADORA1P30542 326 aa10.8□□□□□ -0.68
USP6NL-203ENST00000443016 OS9Q13438 667 aaPredicted RBP10.8□□□□□ -0.68
USP6NL-203ENST00000443016 DIXDC1Q155Q3 683 aa10.8□□□□□ -0.68
USP6NL-203ENST00000443016 APOBEC3HQ6NTF7 200 aaKnown RBP10.8□□□□□ -0.68
USP6NL-203ENST00000443016 ZGPATQ8N5A5 531 aaKnown RBP10.8□□□□□ -0.68
USP6NL-203ENST00000443016 ABCF2Q9UG63 623 aa10.8□□□□□ -0.68
USP6NL-203ENST00000443016 SSC5DA1L4H1 1573 aa10.8□□□□□ -0.68
USP6NL-203ENST00000443016 AKAP11Q9UKA4 1901 aa10.8□□□□□ -0.68
USP6NL-203ENST00000443016 MANSC4A6NHS7 340 aaPredicted RBP10.8□□□□□ -0.68
USP6NL-203ENST00000443016 INHBEP58166 350 aa10.8□□□□□ -0.68
USP6NL-203ENST00000443016 MVPQ14764 893 aaKnown RBP10.8□□□□□ -0.68
USP6NL-203ENST00000443016 CDAN1Q8IWY9 1227 aa10.8□□□□□ -0.68
USP6NL-203ENST00000443016 CSADQ9Y600 493 aa10.8□□□□□ -0.68
USP6NL-203ENST00000443016 ECM29Q5VYK3 1845 aa10.79□□□□□ -0.68
USP6NL-203ENST00000443016 PNMA6EA0A0J9YXQ4 647 aa10.79□□□□□ -0.68
USP6NL-203ENST00000443016 ALDH1A1P00352 501 aa10.79□□□□□ -0.68
USP6NL-203ENST00000443016 HOOK2Q96ED9 719 aa10.79□□□□□ -0.68
USP6NL-203ENST00000443016 XAGE2Q96GT9 111 aa10.79□□□□□ -0.68
USP6NL-203ENST00000443016 WNK4Q96J92 1243 aa10.79□□□□□ -0.68
USP6NL-203ENST00000443016 TEPSINQ96N21 525 aa10.79□□□□□ -0.68
USP6NL-203ENST00000443016 ELP3Q9H9T3 547 aa10.79□□□□□ -0.68
USP6NL-203ENST00000443016 NEFLP07196 543 aa10.79□□□□□ -0.68
USP6NL-203ENST00000443016 FAM83AQ86UY5 434 aa10.79□□□□□ -0.68
USP6NL-203ENST00000443016 DZIP1Q86YF9 867 aaKnown RBP10.79□□□□□ -0.68
USP6NL-203ENST00000443016 ARAP2Q8WZ64 1704 aa10.78□□□□□ -0.68
USP6NL-203ENST00000443016 TCP10Q12799 353 aa10.78□□□□□ -0.68
USP6NL-203ENST00000443016 RASGRF1Q13972 1273 aa10.78□□□□□ -0.68
USP6NL-203ENST00000443016 FKBP1CQ5VVH2 108 aa10.78□□□□□ -0.68
USP6NL-203ENST00000443016 OTUD7BQ6GQQ9 843 aa10.78□□□□□ -0.68
USP6NL-203ENST00000443016 DAGLAQ9Y4D2 1042 aa10.78□□□□□ -0.68
USP6NL-203ENST00000443016 CENPFP49454 3210 aa10.78□□□□□ -0.68
USP6NL-203ENST00000443016 MAP3K9P80192 1104 aa10.78□□□□□ -0.68
USP6NL-203ENST00000443016 ZNF296Q8WUU4 475 aaPredicted RBP10.78□□□□□ -0.68
USP6NL-203ENST00000443016 OPTNQ96CV9 577 aa10.78□□□□□ -0.68
USP6NL-203ENST00000443016 SALL1Q9NSC2 1324 aa10.78□□□□□ -0.68
USP6NL-203ENST00000443016 VGLL4Q14135 290 aa10.77□□□□□ -0.69
USP6NL-203ENST00000443016 DCAF15Q66K64 600 aa10.77□□□□□ -0.69
USP6NL-203ENST00000443016 SPTY2D1Q68D10 685 aaPredicted RBP10.77□□□□□ -0.69
USP6NL-203ENST00000443016 CDC42EP5Q6NZY7 148 aa10.77□□□□□ -0.69
USP6NL-203ENST00000443016 SLF2Q8IX21 1173 aa10.77□□□□□ -0.69
USP6NL-203ENST00000443016 WRNIP1Q96S55 665 aa10.77□□□□□ -0.69
USP6NL-203ENST00000443016 USP40Q9NVE5 1235 aa10.77□□□□□ -0.69
USP6NL-203ENST00000443016 RNF216Q9NWF9 866 aaPredicted RBP10.77□□□□□ -0.69
USP6NL-203ENST00000443016 GPR25O00155 361 aa10.77□□□□□ -0.69
USP6NL-203ENST00000443016 SURF6O75683 361 aaKnown RBP10.77□□□□□ -0.69
USP6NL-203ENST00000443016 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.77□□□□□ -0.69
USP6NL-203ENST00000443016 MIGA2Q7L4E1 593 aa10.77□□□□□ -0.69
USP6NL-203ENST00000443016 CTU1Q7Z7A3 348 aaKnown RBP10.77□□□□□ -0.69
USP6NL-203ENST00000443016 IFNL1Q8IU54 200 aa10.77□□□□□ -0.69
USP6NL-203ENST00000443016 MYH13Q9UKX3 1938 aa10.76□□□□□ -0.69
USP6NL-203ENST00000443016 RLBP1P12271 317 aa10.76□□□□□ -0.69
USP6NL-203ENST00000443016 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.76□□□□□ -0.69
USP6NL-203ENST00000443016 FAM151AQ8WW52 585 aa10.76□□□□□ -0.69
USP6NL-203ENST00000443016 OTUD5Q96G74 571 aa10.76□□□□□ -0.69
USP6NL-203ENST00000443016 SUPT16HQ9Y5B9 1047 aaKnown RBP10.76□□□□□ -0.69
USP6NL-203ENST00000443016 RRP1P56182 461 aaKnown RBP10.76□□□□□ -0.69
USP6NL-203ENST00000443016 ATP8B2P98198 1209 aa10.76□□□□□ -0.69
USP6NL-203ENST00000443016 NFIAQ12857 509 aa10.76□□□□□ -0.69
USP6NL-203ENST00000443016 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.76□□□□□ -0.69
USP6NL-203ENST00000443016 IGF2BP3O00425 579 aaKnown RBP eCLIP10.75□□□□□ -0.69
USP6NL-203ENST00000443016 ZBTB7BO15156 539 aaPredicted RBP10.75□□□□□ -0.69
USP6NL-203ENST00000443016 MS4A1P11836 297 aa10.75□□□□□ -0.69
USP6NL-203ENST00000443016 ZSCAN29Q8IWY8 852 aaPredicted RBP10.75□□□□□ -0.69
USP6NL-203ENST00000443016 SPATA5Q8NB90 893 aa10.75□□□□□ -0.69
USP6NL-203ENST00000443016 PANK1Q8TE04 598 aa10.75□□□□□ -0.69
USP6NL-203ENST00000443016 ZKSCAN4Q969J2 545 aaPredicted RBP10.75□□□□□ -0.69
USP6NL-203ENST00000443016 PDS5AQ29RF7 1337 aaKnown RBP10.75□□□□□ -0.69
USP6NL-203ENST00000443016 FKTNO75072 461 aa10.75□□□□□ -0.69
USP6NL-203ENST00000443016 GJA5P36382 358 aa10.75□□□□□ -0.69
USP6NL-203ENST00000443016 RBM25P49756 843 aaKnown RBP10.75□□□□□ -0.69
USP6NL-203ENST00000443016 CCDC158Q5M9N0 1113 aa10.75□□□□□ -0.69
USP6NL-203ENST00000443016 PI16Q6UXB8 463 aa10.75□□□□□ -0.69
USP6NL-203ENST00000443016 SSH3Q8TE77 659 aa10.75□□□□□ -0.69
USP6NL-203ENST00000443016 ZNF341Q9BYN7 854 aa10.75□□□□□ -0.69
USP6NL-203ENST00000443016 HMG20BQ9P0W2 317 aa10.75□□□□□ -0.69
USP6NL-203ENST00000443016 GTF2A2P52657 109 aa10.74□□□□□ -0.69
USP6NL-203ENST00000443016 POLA2Q14181 598 aa10.74□□□□□ -0.69
USP6NL-203ENST00000443016 TTC39AQ5SRH9 613 aa10.74□□□□□ -0.69
USP6NL-203ENST00000443016 TBC1D9Q6ZT07 1266 aa10.74□□□□□ -0.69
USP6NL-203ENST00000443016 R3HDMLQ9H3Y0 253 aa10.74□□□□□ -0.69
USP6NL-203ENST00000443016 RAI14Q9P0K7 980 aa10.74□□□□□ -0.69
USP6NL-203ENST00000443016 LRP2BPQ9P2M1 347 aa10.74□□□□□ -0.69
USP6NL-203ENST00000443016 CCL15-CCL14A0A0B4J2E2 113 aa10.74□□□□□ -0.69
USP6NL-203ENST00000443016 WDHD1O75717 1129 aaPredicted RBP10.74□□□□□ -0.69
USP6NL-203ENST00000443016 UQCRFS1P1P0C7P4 283 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 214.5 ms