RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 KIF22Q14807 665 aa8.75□□□□□ -1.01
CDC42BPA-208ENST00000442054 INTS4Q96HW7 963 aaKnown RBP8.75□□□□□ -1.01
CDC42BPA-208ENST00000442054 UBR2Q8IWV8 1755 aa8.75□□□□□ -1.01
CDC42BPA-208ENST00000442054 PAPPAQ13219 1627 aa8.75□□□□□ -1.01
CDC42BPA-208ENST00000442054 LAMB4A4D0S4 1761 aa8.75□□□□□ -1.01
CDC42BPA-208ENST00000442054 MINDY4BA8MYZ0 360 aa8.75□□□□□ -1.01
CDC42BPA-208ENST00000442054 UBE2Q2LH0YL09 131 aa8.75□□□□□ -1.01
CDC42BPA-208ENST00000442054 MAP4K4O95819 1239 aaPredicted RBP8.75□□□□□ -1.01
CDC42BPA-208ENST00000442054 NUCB2P80303 420 aa8.75□□□□□ -1.01
CDC42BPA-208ENST00000442054 HS1BP3Q53T59 392 aa8.75□□□□□ -1.01
CDC42BPA-208ENST00000442054 CCDC102BQ68D86 513 aa8.75□□□□□ -1.01
CDC42BPA-208ENST00000442054 MIGA1Q8NAN2 632 aa8.75□□□□□ -1.01
CDC42BPA-208ENST00000442054 TMEM87AQ8NBN3 555 aa8.75□□□□□ -1.01
CDC42BPA-208ENST00000442054 RHPN1Q8TCX5 695 aa8.75□□□□□ -1.01
CDC42BPA-208ENST00000442054 SMCR8Q8TEV9 937 aaPredicted RBP8.75□□□□□ -1.01
CDC42BPA-208ENST00000442054 TMX3Q96JJ7 454 aa8.75□□□□□ -1.01
CDC42BPA-208ENST00000442054 ARFGEF2Q9Y6D5 1785 aa8.75□□□□□ -1.01
CDC42BPA-208ENST00000442054 KCPQ6ZWJ8 1503 aa8.75□□□□□ -1.01
CDC42BPA-208ENST00000442054 TRAF5O00463 557 aa8.74□□□□□ -1.01
CDC42BPA-208ENST00000442054 PHKA1P46020 1223 aa8.74□□□□□ -1.01
CDC42BPA-208ENST00000442054 CHMP4CQ96CF2 233 aa8.74□□□□□ -1.01
CDC42BPA-208ENST00000442054 PLA2G12BQ9BX93 195 aa8.74□□□□□ -1.01
CDC42BPA-208ENST00000442054 MKNK2Q9HBH9 465 aa8.74□□□□□ -1.01
CDC42BPA-208ENST00000442054 FBXO3Q9UK99 471 aa8.74□□□□□ -1.01
CDC42BPA-208ENST00000442054 CRKP46108 304 aa8.74□□□□□ -1.01
CDC42BPA-208ENST00000442054 RRP12Q5JTH9 1297 aaKnown RBP8.74□□□□□ -1.01
CDC42BPA-208ENST00000442054 DBNDD2Q9BQY9 259 aa8.74□□□□□ -1.01
CDC42BPA-208ENST00000442054 CRNKL1Q9BZJ0 848 aaKnown RBP8.74□□□□□ -1.01
CDC42BPA-208ENST00000442054 KCNQ5Q9NR82 932 aa8.74□□□□□ -1.01
CDC42BPA-208ENST00000442054 MYCP01106 439 aaPredicted RBP8.74□□□□□ -1.01
CDC42BPA-208ENST00000442054 CSF1RP07333 972 aa8.74□□□□□ -1.01
CDC42BPA-208ENST00000442054 HSPA4P34932 840 aa8.74□□□□□ -1.01
CDC42BPA-208ENST00000442054 FOXO4P98177 505 aa8.74□□□□□ -1.01
CDC42BPA-208ENST00000442054 CCDC173Q0VFZ6 552 aa8.74□□□□□ -1.01
CDC42BPA-208ENST00000442054 MTX1Q13505 466 aa8.74□□□□□ -1.01
CDC42BPA-208ENST00000442054 TSHZ3Q63HK5 1081 aa8.74□□□□□ -1.01
CDC42BPA-208ENST00000442054 MIGA2Q7L4E1 593 aa8.74□□□□□ -1.01
CDC42BPA-208ENST00000442054 ADM5C9JUS6 153 aa8.73□□□□□ -1.01
CDC42BPA-208ENST00000442054 ST3GAL1Q11201 340 aa8.73□□□□□ -1.01
CDC42BPA-208ENST00000442054 MAPK8IP2Q13387 824 aaPredicted RBP8.73□□□□□ -1.01
CDC42BPA-208ENST00000442054 RASA3Q14644 834 aa8.73□□□□□ -1.01
CDC42BPA-208ENST00000442054 SLC9C2Q5TAH2 1124 aa8.73□□□□□ -1.01
CDC42BPA-208ENST00000442054 LTBP3Q9NS15 1303 aa8.73□□□□□ -1.01
CDC42BPA-208ENST00000442054 DIXDC1Q155Q3 683 aa8.73□□□□□ -1.01
CDC42BPA-208ENST00000442054 SPATA5Q8NB90 893 aa8.73□□□□□ -1.01
CDC42BPA-208ENST00000442054 LSG1Q9H089 658 aaKnown RBP8.73□□□□□ -1.01
CDC42BPA-208ENST00000442054 DEFB129Q9H1M3 183 aa8.73□□□□□ -1.01
CDC42BPA-208ENST00000442054 AATFQ9NY61 560 aaKnown RBP eCLIP8.73□□□□□ -1.01
CDC42BPA-208ENST00000442054 SHANK3Q9BYB0 1731 aa8.73□□□□□ -1.01
CDC42BPA-208ENST00000442054 ZNF500O60304 480 aaPredicted RBP8.73□□□□□ -1.01
CDC42BPA-208ENST00000442054 POTEIP0CG38 1075 aa8.73□□□□□ -1.01
CDC42BPA-208ENST00000442054 POTEJP0CG39 1038 aa8.73□□□□□ -1.01
CDC42BPA-208ENST00000442054 TMEM132AQ24JP5 1023 aa8.73□□□□□ -1.01
CDC42BPA-208ENST00000442054 MAGEB6Q8N7X4 407 aa8.73□□□□□ -1.01
CDC42BPA-208ENST00000442054 CCDC102AQ96A19 550 aa8.73□□□□□ -1.01
CDC42BPA-208ENST00000442054 FAM84BQ96KN1 310 aaPredicted RBP8.73□□□□□ -1.01
CDC42BPA-208ENST00000442054 COPRSQ9NQ92 184 aa8.73□□□□□ -1.01
CDC42BPA-208ENST00000442054 UTYO14607 1347 aa8.73□□□□□ -1.01
CDC42BPA-208ENST00000442054 MX1P20591 662 aa8.72□□□□□ -1.01
CDC42BPA-208ENST00000442054 PTPN12Q05209 780 aaKnown RBP8.72□□□□□ -1.01
CDC42BPA-208ENST00000442054 NBPF9Q3BBW0 867 aa8.72□□□□□ -1.01
CDC42BPA-208ENST00000442054 TNNI3KQ59H18 835 aa8.72□□□□□ -1.01
CDC42BPA-208ENST00000442054 CYP4F22Q6NT55 531 aa8.72□□□□□ -1.01
CDC42BPA-208ENST00000442054 TXNRD3Q86VQ6 643 aa8.72□□□□□ -1.01
CDC42BPA-208ENST00000442054 TRPM4Q8TD43 1214 aa8.72□□□□□ -1.01
CDC42BPA-208ENST00000442054 CSRNP1Q96S65 589 aa8.72□□□□□ -1.01
CDC42BPA-208ENST00000442054 FPGT-TNNI3KV9GXZ4 949 aa8.72□□□□□ -1.01
CDC42BPA-208ENST00000442054 FZD9O00144 591 aa8.72□□□□□ -1.01
CDC42BPA-208ENST00000442054 ADORA1P30542 326 aa8.72□□□□□ -1.01
CDC42BPA-208ENST00000442054 ZC3H15Q8WU90 426 aaKnown RBP8.72□□□□□ -1.01
CDC42BPA-208ENST00000442054 SAP30BPQ9UHR5 308 aaKnown RBP8.72□□□□□ -1.01
CDC42BPA-208ENST00000442054 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.72□□□□□ -1.01
CDC42BPA-208ENST00000442054 REC8O95072 547 aa8.72□□□□□ -1.01
CDC42BPA-208ENST00000442054 BTDP43251 543 aa8.72□□□□□ -1.01
CDC42BPA-208ENST00000442054 TRDNQ13061 729 aa8.72□□□□□ -1.01
CDC42BPA-208ENST00000442054 TTC6Q86TZ1 520 aa8.72□□□□□ -1.01
CDC42BPA-208ENST00000442054 CAPNS2Q96L46 248 aa8.72□□□□□ -1.01
CDC42BPA-208ENST00000442054 ZNF287Q9HBT7 754 aa8.72□□□□□ -1.01
CDC42BPA-208ENST00000442054 TMOD4Q9NZQ9 345 aa8.72□□□□□ -1.01
CDC42BPA-208ENST00000442054 NOL7Q9UMY1 257 aaKnown RBP8.72□□□□□ -1.01
CDC42BPA-208ENST00000442054 AFDNP55196 1824 aaKnown RBP8.71□□□□□ -1.01
CDC42BPA-208ENST00000442054 TRPA1O75762 1119 aa8.71□□□□□ -1.01
CDC42BPA-208ENST00000442054 KLRK1P26718 216 aa8.71□□□□□ -1.01
CDC42BPA-208ENST00000442054 MAP2K1Q02750 393 aaPredicted RBP8.71□□□□□ -1.01
CDC42BPA-208ENST00000442054 MCTP1Q6DN14 999 aa8.71□□□□□ -1.01
CDC42BPA-208ENST00000442054 GADL1Q6ZQY3 521 aa8.71□□□□□ -1.01
CDC42BPA-208ENST00000442054 MAPKAPK5Q8IW41 473 aa8.71□□□□□ -1.01
CDC42BPA-208ENST00000442054 ZNF444Q8N0Y2 327 aaPredicted RBP8.71□□□□□ -1.01
CDC42BPA-208ENST00000442054 WRNIP1Q96S55 665 aa8.71□□□□□ -1.01
CDC42BPA-208ENST00000442054 FUCA2Q9BTY2 467 aa8.71□□□□□ -1.01
CDC42BPA-208ENST00000442054 MCM9Q9NXL9 1143 aa8.71□□□□□ -1.01
CDC42BPA-208ENST00000442054 KLRG2A4D1S0 409 aaPredicted RBP8.71□□□□□ -1.02
CDC42BPA-208ENST00000442054 CIAO1O76071 339 aa8.71□□□□□ -1.02
CDC42BPA-208ENST00000442054 NOGQ13253 232 aa8.71□□□□□ -1.02
CDC42BPA-208ENST00000442054 LRSAM1Q6UWE0 723 aa8.71□□□□□ -1.02
CDC42BPA-208ENST00000442054 KAZALD1Q96I82 304 aa8.71□□□□□ -1.02
CDC42BPA-208ENST00000442054 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.71□□□□□ -1.02
CDC42BPA-208ENST00000442054 ECHDC1Q9NTX5 307 aa8.71□□□□□ -1.02
CDC42BPA-208ENST00000442054 RBM27Q9P2N5 1060 aaKnown RBP8.71□□□□□ -1.02
CDC42BPA-208ENST00000442054 MAGEB6P1A0A0J9YX57 407 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 134.6 ms