RNA–Protein interactions for RNA: ENST00000440705.6

VRK2-207, Transcript of vaccinia related kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK2, Length 1,676 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-207ENST00000440705 MYH2Q9UKX2 1941 aa24■■□□□ 1.43
VRK2-207ENST00000440705 FKBP1AP62942 108 aaKnown RBP23.99■■□□□ 1.43
VRK2-207ENST00000440705 STRIP1Q5VSL9 837 aa23.99■■□□□ 1.43
VRK2-207ENST00000440705 MROH7-TTC4A0A0A0MT08 1334 aa23.99■■□□□ 1.43
VRK2-207ENST00000440705 AK2P54819 239 aa23.99■■□□□ 1.43
VRK2-207ENST00000440705 PPP4CP60510 307 aa23.99■■□□□ 1.43
VRK2-207ENST00000440705 ANKRD1Q15327 319 aa23.99■■□□□ 1.43
VRK2-207ENST00000440705 DIXDC1Q155Q3 683 aa23.99■■□□□ 1.43
VRK2-207ENST00000440705 LAMA4Q16363 1823 aa23.98■■□□□ 1.43
VRK2-207ENST00000440705 DHX32Q7L7V1 743 aaKnown RBP23.98■■□□□ 1.43
VRK2-207ENST00000440705 SPRYD3Q8NCJ5 442 aa23.98■■□□□ 1.43
VRK2-207ENST00000440705 SDR42E1Q8WUS8 393 aa23.98■■□□□ 1.43
VRK2-207ENST00000440705 TMX3Q96JJ7 454 aa23.98■■□□□ 1.43
VRK2-207ENST00000440705 ATP8A2Q9NTI2 1148 aa23.98■■□□□ 1.43
VRK2-207ENST00000440705 LIMCH1Q9UPQ0 1083 aa23.98■■□□□ 1.43
VRK2-207ENST00000440705 USP17L3A6NCW0 530 aa23.96■■□□□ 1.43
VRK2-207ENST00000440705 USP17L4A6NCW7 530 aa23.96■■□□□ 1.43
VRK2-207ENST00000440705 USP17L1Q7RTZ2 530 aa23.96■■□□□ 1.43
VRK2-207ENST00000440705 CERS5Q8N5B7 392 aa23.96■■□□□ 1.43
VRK2-207ENST00000440705 GPR75-ASB3A0A0A6YYF3 556 aa23.95■■□□□ 1.43
VRK2-207ENST00000440705 PLCG2P16885 1265 aa23.95■■□□□ 1.43
VRK2-207ENST00000440705 TRDNQ13061 729 aa23.95■■□□□ 1.43
VRK2-207ENST00000440705 NCOA7Q8NI08 942 aa23.95■■□□□ 1.43
VRK2-207ENST00000440705 GAKO14976 1311 aa23.95■■□□□ 1.42
VRK2-207ENST00000440705 ILDR2Q71H61 639 aa23.95■■□□□ 1.42
VRK2-207ENST00000440705 NOL8Q76FK4 1167 aaKnown RBP23.95■■□□□ 1.42
VRK2-207ENST00000440705 LARGE2Q8N3Y3 721 aa23.95■■□□□ 1.42
VRK2-207ENST00000440705 ZSCAN31Q96LW9 406 aaPredicted RBP23.95■■□□□ 1.42
VRK2-207ENST00000440705 SLKQ9H2G2 1235 aaPredicted RBP23.95■■□□□ 1.42
VRK2-207ENST00000440705 KCNQ5Q9NR82 932 aa23.95■■□□□ 1.42
VRK2-207ENST00000440705 DACT2Q5SW24 774 aa23.94■■□□□ 1.42
VRK2-207ENST00000440705 RALYLQ86SE5 291 aaKnown RBP23.94■■□□□ 1.42
VRK2-207ENST00000440705 ZNF277Q9NRM2 450 aaPredicted RBP23.94■■□□□ 1.42
VRK2-207ENST00000440705 TTF2Q9UNY4 1162 aaKnown RBP23.94■■□□□ 1.42
VRK2-207ENST00000440705 BTDP43251 543 aa23.93■■□□□ 1.42
VRK2-207ENST00000440705 EXOSC10Q01780 885 aaKnown RBP23.93■■□□□ 1.42
VRK2-207ENST00000440705 COL9A3Q14050 684 aaPredicted RBP23.93■■□□□ 1.42
VRK2-207ENST00000440705 NBPF3Q9H094 633 aa23.93■■□□□ 1.42
VRK2-207ENST00000440705 SCN9AQ15858 1988 aa23.93■■□□□ 1.42
VRK2-207ENST00000440705 TBC1D10CQ8IV04 446 aa23.92■■□□□ 1.42
VRK2-207ENST00000440705 MRIQ9BWK5 157 aa23.92■■□□□ 1.42
VRK2-207ENST00000440705 DCP1AQ9NPI6 582 aaPredicted RBP23.92■■□□□ 1.42
VRK2-207ENST00000440705 SH2B1Q9NRF2 756 aaPredicted RBP23.92■■□□□ 1.42
VRK2-207ENST00000440705 ANAPC4Q9UJX5 808 aa23.92■■□□□ 1.42
VRK2-207ENST00000440705 BCS1LQ9Y276 419 aa23.92■■□□□ 1.42
VRK2-207ENST00000440705 F8W031 263 aaPredicted RBP23.92■■□□□ 1.42
VRK2-207ENST00000440705 MCM5P33992 734 aa23.92■■□□□ 1.42
VRK2-207ENST00000440705 FGD1P98174 961 aa23.92■■□□□ 1.42
VRK2-207ENST00000440705 PPARAQ07869 468 aa23.92■■□□□ 1.42
VRK2-207ENST00000440705 CUL4AQ13619 759 aa23.92■■□□□ 1.42
VRK2-207ENST00000440705 AKNAD1Q5T1N1 836 aa23.92■■□□□ 1.42
VRK2-207ENST00000440705 SH3RF3Q8TEJ3 882 aaPredicted RBP23.92■■□□□ 1.42
VRK2-207ENST00000440705 TCEANC2Q96MN5 208 aa23.92■■□□□ 1.42
VRK2-207ENST00000440705 MXD3Q9BW11 206 aa23.92■■□□□ 1.42
VRK2-207ENST00000440705 TAOK3Q9H2K8 898 aa23.92■■□□□ 1.42
VRK2-207ENST00000440705 RNF41Q9H4P4 317 aaPredicted RBP23.92■■□□□ 1.42
VRK2-207ENST00000440705 CNNM2Q9H8M5 875 aa23.92■■□□□ 1.42
VRK2-207ENST00000440705 FER1L6Q2WGJ9 1857 aa23.91■■□□□ 1.42
VRK2-207ENST00000440705 YDJCA8MPS7 323 aa23.91■■□□□ 1.42
VRK2-207ENST00000440705 IARSP41252 1262 aaKnown RBP23.91■■□□□ 1.42
VRK2-207ENST00000440705 USP5P45974 858 aa23.91■■□□□ 1.42
VRK2-207ENST00000440705 HHIPL2Q6UWX4 724 aa23.91■■□□□ 1.42
VRK2-207ENST00000440705 MFSD6Q6ZSS7 791 aa23.91■■□□□ 1.42
VRK2-207ENST00000440705 Q6ZUG5 572 aa23.91■■□□□ 1.42
VRK2-207ENST00000440705 DAGLAQ9Y4D2 1042 aa23.91■■□□□ 1.42
VRK2-207ENST00000440705 WDR19Q8NEZ3 1342 aa23.91■■□□□ 1.42
VRK2-207ENST00000440705 MINDY4BA8MYZ0 360 aa23.9■■□□□ 1.42
VRK2-207ENST00000440705 CTDSPL2Q05D32 466 aa23.9■■□□□ 1.42
VRK2-207ENST00000440705 TOB2Q14106 344 aaPredicted RBP23.9■■□□□ 1.42
VRK2-207ENST00000440705 CTR9Q6PD62 1173 aa23.9■■□□□ 1.42
VRK2-207ENST00000440705 MB21D2Q8IYB1 491 aaPredicted RBP23.9■■□□□ 1.42
VRK2-207ENST00000440705 STAG1Q8WVM7 1258 aa23.9■■□□□ 1.42
VRK2-207ENST00000440705 TEKT1Q969V4 418 aa23.9■■□□□ 1.42
VRK2-207ENST00000440705 INTS4Q96HW7 963 aaKnown RBP23.9■■□□□ 1.42
VRK2-207ENST00000440705 ARPP21Q9UBL0 812 aaPredicted RBP23.9■■□□□ 1.42
VRK2-207ENST00000440705 BAZ2AQ9UIF9 1905 aaKnown RBP23.9■■□□□ 1.42
VRK2-207ENST00000440705 TIAM2Q8IVF5 1701 aa23.89■■□□□ 1.42
VRK2-207ENST00000440705 HDLBPQ00341 1268 aaKnown RBP23.89■■□□□ 1.42
VRK2-207ENST00000440705 SBK1Q52WX2 424 aa23.89■■□□□ 1.42
VRK2-207ENST00000440705 NIM1KQ8IY84 436 aa23.89■■□□□ 1.42
VRK2-207ENST00000440705 FBXL16Q8N461 479 aa23.89■■□□□ 1.42
VRK2-207ENST00000440705 KRT23Q9C075 422 aa23.89■■□□□ 1.42
VRK2-207ENST00000440705 CWC22Q9HCG8 908 aaKnown RBP23.89■■□□□ 1.42
VRK2-207ENST00000440705 ZNF646O15015 1829 aaPredicted RBP23.89■■□□□ 1.41
VRK2-207ENST00000440705 USP17L12C9JPN9 530 aa23.89■■□□□ 1.41
VRK2-207ENST00000440705 USP17L21D6R901 530 aa23.89■■□□□ 1.41
VRK2-207ENST00000440705 NLGN2Q8NFZ4 835 aa23.89■■□□□ 1.41
VRK2-207ENST00000440705 LARP6Q9BRS8 491 aaKnown RBP23.89■■□□□ 1.41
VRK2-207ENST00000440705 AGXT2Q9BYV1 514 aa23.89■■□□□ 1.41
VRK2-207ENST00000440705 FOXD4L1Q9NU39 408 aa23.89■■□□□ 1.41
VRK2-207ENST00000440705 PSME4Q14997 1843 aa23.88■■□□□ 1.41
VRK2-207ENST00000440705 PCP11498 1178 aaKnown RBP23.88■■□□□ 1.41
VRK2-207ENST00000440705 TEX11Q8IYF3 940 aa23.88■■□□□ 1.41
VRK2-207ENST00000440705 MKRN1Q9UHC7 482 aaKnown RBP23.88■■□□□ 1.41
VRK2-207ENST00000440705 ZNRF3Q9ULT6 936 aa23.88■■□□□ 1.41
VRK2-207ENST00000440705 MYO3BQ8WXR4 1341 aa23.88■■□□□ 1.41
VRK2-207ENST00000440705 SCNN1DP51172 638 aa23.87■■□□□ 1.41
VRK2-207ENST00000440705 RHBDL3P58872 404 aa23.87■■□□□ 1.41
VRK2-207ENST00000440705 KIAA0825Q8IV33 1275 aa23.87■■□□□ 1.41
VRK2-207ENST00000440705 AMOTL1Q8IY63 956 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms