RNA–Protein interactions for RNA: ENST00000440375.1

PDGFB-203, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-203ENST00000440375 MAP3K9P80192 1104 aa14.79□□□□□ -0.04
PDGFB-203ENST00000440375 NOM1Q5C9Z4 860 aaKnown RBP14.79□□□□□ -0.04
PDGFB-203ENST00000440375 ZBED9Q6R2W3 1325 aa14.79□□□□□ -0.04
PDGFB-203ENST00000440375 PI16Q6UXB8 463 aa14.79□□□□□ -0.04
PDGFB-203ENST00000440375 SNCAIPQ9Y6H5 919 aa14.79□□□□□ -0.04
PDGFB-203ENST00000440375 RFX7Q2KHR2 1363 aa14.78□□□□□ -0.04
PDGFB-203ENST00000440375 ZBTB22O15209 634 aa14.78□□□□□ -0.04
PDGFB-203ENST00000440375 TCP10Q12799 353 aa14.78□□□□□ -0.04
PDGFB-203ENST00000440375 OTUD5Q96G74 571 aa14.78□□□□□ -0.04
PDGFB-203ENST00000440375 MS4A4AQ96JQ5 239 aa14.78□□□□□ -0.04
PDGFB-203ENST00000440375 WRNIP1Q96S55 665 aa14.78□□□□□ -0.04
PDGFB-203ENST00000440375 FAM198AQ9UFP1 575 aa14.78□□□□□ -0.04
PDGFB-203ENST00000440375 GAKO14976 1311 aa14.77□□□□□ -0.04
PDGFB-203ENST00000440375 PDS5AQ29RF7 1337 aaKnown RBP14.77□□□□□ -0.04
PDGFB-203ENST00000440375 TESPA1A2RU30 521 aaPredicted RBP14.77□□□□□ -0.05
PDGFB-203ENST00000440375 FKTNO75072 461 aa14.77□□□□□ -0.05
PDGFB-203ENST00000440375 ALDH1A1P00352 501 aa14.77□□□□□ -0.05
PDGFB-203ENST00000440375 INHBEP58166 350 aa14.77□□□□□ -0.05
PDGFB-203ENST00000440375 CRHR2Q13324 411 aa14.77□□□□□ -0.05
PDGFB-203ENST00000440375 POLA2Q14181 598 aa14.77□□□□□ -0.05
PDGFB-203ENST00000440375 MVPQ14764 893 aaKnown RBP14.77□□□□□ -0.05
PDGFB-203ENST00000440375 MIGA2Q7L4E1 593 aa14.77□□□□□ -0.05
PDGFB-203ENST00000440375 ZFPM1Q8IX07 1006 aa14.77□□□□□ -0.05
PDGFB-203ENST00000440375 BRI3BPQ8WY22 251 aa14.77□□□□□ -0.05
PDGFB-203ENST00000440375 ZKSCAN4Q969J2 545 aaPredicted RBP14.77□□□□□ -0.05
PDGFB-203ENST00000440375 NEUROD6Q96NK8 337 aa14.77□□□□□ -0.05
PDGFB-203ENST00000440375 ABCF2Q9UG63 623 aa14.77□□□□□ -0.05
PDGFB-203ENST00000440375 AKAP2Q9Y2D5 859 aa14.77□□□□□ -0.05
PDGFB-203ENST00000440375 CSADQ9Y600 493 aa14.77□□□□□ -0.05
PDGFB-203ENST00000440375 SPDYE5A6NIY4 337 aa14.76□□□□□ -0.05
PDGFB-203ENST00000440375 TNRC18O15417 2968 aaPredicted RBP14.76□□□□□ -0.05
PDGFB-203ENST00000440375 INPP5BP32019 993 aa14.76□□□□□ -0.05
PDGFB-203ENST00000440375 RGS19P49795 217 aa14.76□□□□□ -0.05
PDGFB-203ENST00000440375 SOX10P56693 466 aa14.76□□□□□ -0.05
PDGFB-203ENST00000440375 DZIP1Q86YF9 867 aaKnown RBP14.76□□□□□ -0.05
PDGFB-203ENST00000440375 ITPRIPQ8IWB1 547 aa14.76□□□□□ -0.05
PDGFB-203ENST00000440375 FTSJ3Q8IY81 847 aaKnown RBP14.76□□□□□ -0.05
PDGFB-203ENST00000440375 ZNF384Q8TF68 577 aa14.76□□□□□ -0.05
PDGFB-203ENST00000440375 FAM151AQ8WW52 585 aa14.76□□□□□ -0.05
PDGFB-203ENST00000440375 USP40Q9NVE5 1235 aa14.76□□□□□ -0.05
PDGFB-203ENST00000440375 HMG20BQ9P0W2 317 aa14.76□□□□□ -0.05
PDGFB-203ENST00000440375 HPS5Q9UPZ3 1129 aa14.76□□□□□ -0.05
PDGFB-203ENST00000440375 ATRNL1Q5VV63 1379 aa14.75□□□□□ -0.05
PDGFB-203ENST00000440375 CCL15-CCL14A0A0B4J2E2 113 aa14.75□□□□□ -0.05
PDGFB-203ENST00000440375 CAP1Q01518 475 aa14.75□□□□□ -0.05
PDGFB-203ENST00000440375 G3BP1Q13283 466 aaKnown RBP eCLIP14.75□□□□□ -0.05
PDGFB-203ENST00000440375 CCL15Q16663 113 aa14.75□□□□□ -0.05
PDGFB-203ENST00000440375 ZGPATQ8N5A5 531 aaKnown RBP14.75□□□□□ -0.05
PDGFB-203ENST00000440375 SSH3Q8TE77 659 aa14.75□□□□□ -0.05
PDGFB-203ENST00000440375 MYH2Q9UKX2 1941 aa14.74□□□□□ -0.05
PDGFB-203ENST00000440375 CENPFP49454 3210 aa14.74□□□□□ -0.05
PDGFB-203ENST00000440375 SLURP2P0DP57 97 aa14.74□□□□□ -0.05
PDGFB-203ENST00000440375 ARID4AP29374 1257 aaPredicted RBP14.74□□□□□ -0.05
PDGFB-203ENST00000440375 RGS3P49796 1198 aa14.74□□□□□ -0.05
PDGFB-203ENST00000440375 MECOMQ03112 1051 aa14.74□□□□□ -0.05
PDGFB-203ENST00000440375 DCAF15Q66K64 600 aa14.74□□□□□ -0.05
PDGFB-203ENST00000440375 TBC1D9Q6ZT07 1266 aa14.74□□□□□ -0.05
PDGFB-203ENST00000440375 FAM43AQ8N2R8 423 aa14.74□□□□□ -0.05
PDGFB-203ENST00000440375 PANK1Q8TE04 598 aa14.74□□□□□ -0.05
PDGFB-203ENST00000440375 ZNF341Q9BYN7 854 aa14.74□□□□□ -0.05
PDGFB-203ENST00000440375 DDX4Q9NQI0 724 aaKnown RBP14.74□□□□□ -0.05
PDGFB-203ENST00000440375 MROH7-TTC4A0A0A0MT08 1334 aa14.73□□□□□ -0.05
PDGFB-203ENST00000440375 IRF6O14896 467 aa14.73□□□□□ -0.05
PDGFB-203ENST00000440375 ZBTB7BO15156 539 aaPredicted RBP14.73□□□□□ -0.05
PDGFB-203ENST00000440375 WDHD1O75717 1129 aaPredicted RBP14.73□□□□□ -0.05
PDGFB-203ENST00000440375 MCAMP43121 646 aa14.73□□□□□ -0.05
PDGFB-203ENST00000440375 BTDP43251 543 aa14.73□□□□□ -0.05
PDGFB-203ENST00000440375 GTF2A2P52657 109 aa14.73□□□□□ -0.05
PDGFB-203ENST00000440375 ATP8B2P98198 1209 aa14.73□□□□□ -0.05
PDGFB-203ENST00000440375 GORABQ5T7V8 394 aa14.73□□□□□ -0.05
PDGFB-203ENST00000440375 SH3BP5LQ7L8J4 393 aa14.73□□□□□ -0.05
PDGFB-203ENST00000440375 ERO1BQ86YB8 467 aa14.73□□□□□ -0.05
PDGFB-203ENST00000440375 SPATA5Q8NB90 893 aa14.73□□□□□ -0.05
PDGFB-203ENST00000440375 HOOK2Q96ED9 719 aa14.73□□□□□ -0.05
PDGFB-203ENST00000440375 DOCK2Q92608 1830 aa14.72□□□□□ -0.05
PDGFB-203ENST00000440375 MLLT1Q03111 559 aaPredicted RBP14.72□□□□□ -0.05
PDGFB-203ENST00000440375 PPIL2Q13356 520 aa14.72□□□□□ -0.05
PDGFB-203ENST00000440375 PKN2Q16513 984 aaKnown RBP14.72□□□□□ -0.05
PDGFB-203ENST00000440375 TNNI3KQ59H18 835 aa14.72□□□□□ -0.05
PDGFB-203ENST00000440375 OTUD7BQ6GQQ9 843 aa14.72□□□□□ -0.05
PDGFB-203ENST00000440375 FBXO46Q6PJ61 603 aaPredicted RBP14.72□□□□□ -0.05
PDGFB-203ENST00000440375 OTOP1Q7RTM1 612 aa14.72□□□□□ -0.05
PDGFB-203ENST00000440375 CD99L2Q8TCZ2 262 aa14.72□□□□□ -0.05
PDGFB-203ENST00000440375 FAM163AQ96GL9 167 aaPredicted RBP14.72□□□□□ -0.05
PDGFB-203ENST00000440375 DBNDD2Q9BQY9 259 aa14.72□□□□□ -0.05
PDGFB-203ENST00000440375 IDI2Q9BXS1 227 aa14.72□□□□□ -0.05
PDGFB-203ENST00000440375 ZNF112Q9UJU3 913 aa14.72□□□□□ -0.05
PDGFB-203ENST00000440375 FPGT-TNNI3KV9GXZ4 949 aa14.72□□□□□ -0.05
PDGFB-203ENST00000440375 SURF6O75683 361 aaKnown RBP14.71□□□□□ -0.05
PDGFB-203ENST00000440375 RHBDL3P58872 404 aa14.71□□□□□ -0.05
PDGFB-203ENST00000440375 OS9Q13438 667 aaPredicted RBP14.71□□□□□ -0.05
PDGFB-203ENST00000440375 PICALMQ13492 652 aa14.71□□□□□ -0.05
PDGFB-203ENST00000440375 TAF1CQ15572 869 aaPredicted RBP14.71□□□□□ -0.05
PDGFB-203ENST00000440375 SPTY2D1Q68D10 685 aaPredicted RBP14.71□□□□□ -0.05
PDGFB-203ENST00000440375 ERICH6Q7L0X2 663 aa14.71□□□□□ -0.05
PDGFB-203ENST00000440375 SNRKQ9NRH2 765 aa14.71□□□□□ -0.05
PDGFB-203ENST00000440375 TLR7Q9NYK1 1049 aaKnown RBP14.71□□□□□ -0.05
PDGFB-203ENST00000440375 TRIM17Q9Y577 477 aa14.71□□□□□ -0.05
PDGFB-203ENST00000440375 GPR75-ASB3A0A0A6YYF3 556 aa14.7□□□□□ -0.06
PDGFB-203ENST00000440375 DDTLA6NHG4 134 aaPredicted RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms