RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 CERS5Q8N5B7 392 aa14.77□□□□□ -0.05
RTN4-211ENST00000438462 TMEM39BQ9GZU3 492 aa14.77□□□□□ -0.05
RTN4-211ENST00000438462 KCNH6Q9H252 994 aa14.77□□□□□ -0.05
RTN4-211ENST00000438462 PRDM5Q9NQX1 630 aaPredicted RBP14.77□□□□□ -0.05
RTN4-211ENST00000438462 KCNH4Q9UQ05 1017 aa14.77□□□□□ -0.05
RTN4-211ENST00000438462 CACNA1BQ00975 2339 aa14.77□□□□□ -0.05
RTN4-211ENST00000438462 TXNRD3Q86VQ6 643 aa14.76□□□□□ -0.05
RTN4-211ENST00000438462 SENP6Q9GZR1 1112 aaPredicted RBP14.76□□□□□ -0.05
RTN4-211ENST00000438462 ZFHX4Q86UP3 3567 aa14.76□□□□□ -0.05
RTN4-211ENST00000438462 PLXNA1Q9UIW2 1896 aa14.76□□□□□ -0.05
RTN4-211ENST00000438462 BAHCC1Q9P281 2608 aa14.75□□□□□ -0.05
RTN4-211ENST00000438462 RTP1P59025 263 aa14.75□□□□□ -0.05
RTN4-211ENST00000438462 PPATQ06203 517 aa14.75□□□□□ -0.05
RTN4-211ENST00000438462 PDIA6Q15084 440 aa14.75□□□□□ -0.05
RTN4-211ENST00000438462 TAF7Q15545 349 aaPredicted RBP14.75□□□□□ -0.05
RTN4-211ENST00000438462 COL26A1Q96A83 441 aa14.75□□□□□ -0.05
RTN4-211ENST00000438462 PANK3Q9H999 370 aa14.75□□□□□ -0.05
RTN4-211ENST00000438462 PLXNB2O15031 1838 aa14.74□□□□□ -0.05
RTN4-211ENST00000438462 IRS4O14654 1257 aaPredicted RBP14.74□□□□□ -0.05
RTN4-211ENST00000438462 PRKAR2AP13861 404 aaKnown RBP14.74□□□□□ -0.05
RTN4-211ENST00000438462 RBM5P52756 815 aaKnown RBP eCLIP14.74□□□□□ -0.05
RTN4-211ENST00000438462 EIF4A1P60842 406 aaKnown RBP14.74□□□□□ -0.05
RTN4-211ENST00000438462 AIMP1Q12904 312 aaKnown RBP14.74□□□□□ -0.05
RTN4-211ENST00000438462 SPDYE2Q495Y8 402 aa14.74□□□□□ -0.05
RTN4-211ENST00000438462 MICALL1Q8N3F8 863 aa14.74□□□□□ -0.05
RTN4-211ENST00000438462 CHD9Q3L8U1 2897 aa14.74□□□□□ -0.05
RTN4-211ENST00000438462 TCP10L2B9ZVM9 353 aa14.73□□□□□ -0.05
RTN4-211ENST00000438462 MAP3K21Q5TCX8 1036 aa14.73□□□□□ -0.05
RTN4-211ENST00000438462 GPAT2Q6NUI2 795 aa14.73□□□□□ -0.05
RTN4-211ENST00000438462 COPS6Q7L5N1 327 aa14.73□□□□□ -0.05
RTN4-211ENST00000438462 TRIB2Q92519 343 aa14.73□□□□□ -0.05
RTN4-211ENST00000438462 ZNF70Q9UC06 446 aaPredicted RBP14.73□□□□□ -0.05
RTN4-211ENST00000438462 ATP11BQ9Y2G3 1177 aa14.73□□□□□ -0.05
RTN4-211ENST00000438462 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.72□□□□□ -0.05
RTN4-211ENST00000438462 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.72□□□□□ -0.05
RTN4-211ENST00000438462 KLRK1P26718 216 aa14.72□□□□□ -0.05
RTN4-211ENST00000438462 PRKAR2BP31323 418 aa14.72□□□□□ -0.05
RTN4-211ENST00000438462 PKD1L2Q7Z442 2459 aa14.72□□□□□ -0.05
RTN4-211ENST00000438462 EPHB4P54760 987 aa14.71□□□□□ -0.05
RTN4-211ENST00000438462 ANKRD18AQ8IVF6 992 aa14.71□□□□□ -0.05
RTN4-211ENST00000438462 XAGE3Q8WTP9 111 aa14.71□□□□□ -0.05
RTN4-211ENST00000438462 CCDC85AQ96PX6 553 aaPredicted RBP14.71□□□□□ -0.05
RTN4-211ENST00000438462 RLFQ13129 1914 aa14.7□□□□□ -0.06
RTN4-211ENST00000438462 MYO9BQ13459 2157 aa14.7□□□□□ -0.06
RTN4-211ENST00000438462 ERC2O15083 957 aa14.7□□□□□ -0.06
RTN4-211ENST00000438462 PBX2P40425 430 aa14.7□□□□□ -0.06
RTN4-211ENST00000438462 CCT4P50991 539 aaKnown RBP14.7□□□□□ -0.06
RTN4-211ENST00000438462 SKIV2LQ15477 1246 aaKnown RBP14.7□□□□□ -0.06
RTN4-211ENST00000438462 CSPP1Q1MSJ5 1256 aa14.7□□□□□ -0.06
RTN4-211ENST00000438462 LHX8Q68G74 356 aa14.7□□□□□ -0.06
RTN4-211ENST00000438462 ERMP1Q7Z2K6 904 aa14.7□□□□□ -0.06
RTN4-211ENST00000438462 TDRD3Q9H7E2 651 aaKnown RBP14.7□□□□□ -0.06
RTN4-211ENST00000438462 CD320Q9NPF0 282 aa14.7□□□□□ -0.06
RTN4-211ENST00000438462 TLL1O43897 1013 aa14.69□□□□□ -0.06
RTN4-211ENST00000438462 ITGB8P26012 769 aa14.69□□□□□ -0.06
RTN4-211ENST00000438462 PIAS4Q8N2W9 510 aaPredicted RBP14.69□□□□□ -0.06
RTN4-211ENST00000438462 SMCR8Q8TEV9 937 aaPredicted RBP14.69□□□□□ -0.06
RTN4-211ENST00000438462 CHD7Q9P2D1 2997 aa14.68□□□□□ -0.06
RTN4-211ENST00000438462 ATP5J2-PTCD1G3V325 749 aa14.68□□□□□ -0.06
RTN4-211ENST00000438462 EIF2S2P20042 333 aaKnown RBP14.68□□□□□ -0.06
RTN4-211ENST00000438462 TNNI2P48788 182 aa14.68□□□□□ -0.06
RTN4-211ENST00000438462 CCDC152Q4G0S7 254 aa14.68□□□□□ -0.06
RTN4-211ENST00000438462 ANKRD13CQ8N6S4 541 aa14.68□□□□□ -0.06
RTN4-211ENST00000438462 PBX4Q9BYU1 374 aa14.68□□□□□ -0.06
RTN4-211ENST00000438462 PDLIM7Q9NR12 457 aa14.68□□□□□ -0.06
RTN4-211ENST00000438462 DCHS1Q96JQ0 3298 aa14.68□□□□□ -0.06
RTN4-211ENST00000438462 SPTBN4Q9H254 2564 aa14.68□□□□□ -0.06
RTN4-211ENST00000438462 ZNF318Q5VUA4 2279 aa14.67□□□□□ -0.06
RTN4-211ENST00000438462 A0A0G2JMZ2 1700 aa14.67□□□□□ -0.06
RTN4-211ENST00000438462 GFRA3O60609 400 aa14.67□□□□□ -0.06
RTN4-211ENST00000438462 CCND3P30281 292 aaPredicted RBP14.67□□□□□ -0.06
RTN4-211ENST00000438462 INPP5BP32019 993 aa14.67□□□□□ -0.06
RTN4-211ENST00000438462 SH3RF1Q7Z6J0 888 aa14.67□□□□□ -0.06
RTN4-211ENST00000438462 ISCA1Q9BUE6 129 aa14.67□□□□□ -0.06
RTN4-211ENST00000438462 RSPH6AQ9H0K4 717 aa14.67□□□□□ -0.06
RTN4-211ENST00000438462 KMT2BQ9UMN6 2715 aaPredicted RBP14.67□□□□□ -0.06
RTN4-211ENST00000438462 TRIM43BA6NCK2 446 aa14.66□□□□□ -0.06
RTN4-211ENST00000438462 PNISRQ8TF01 805 aaKnown RBP14.66□□□□□ -0.06
RTN4-211ENST00000438462 ANKS1AQ92625 1134 aa14.66□□□□□ -0.06
RTN4-211ENST00000438462 TRIM43Q96BQ3 446 aaPredicted RBP14.66□□□□□ -0.06
RTN4-211ENST00000438462 BSDC1Q9NW68 430 aaPredicted RBP14.66□□□□□ -0.06
RTN4-211ENST00000438462 GJD2Q9UKL4 321 aa14.66□□□□□ -0.06
RTN4-211ENST00000438462 MINPP1Q9UNW1 487 aa14.66□□□□□ -0.06
RTN4-211ENST00000438462 PTPRFP10586 1907 aa14.65□□□□□ -0.06
RTN4-211ENST00000438462 CCDC129Q6ZRS4 1044 aa14.65□□□□□ -0.06
RTN4-211ENST00000438462 CD209Q9NNX6 404 aa14.65□□□□□ -0.06
RTN4-211ENST00000438462 RPAP1Q9BWH6 1393 aaPredicted RBP14.64□□□□□ -0.07
RTN4-211ENST00000438462 GBF1Q92538 1859 aa14.64□□□□□ -0.07
RTN4-211ENST00000438462 CACNB2Q08289 660 aaPredicted RBP14.64□□□□□ -0.07
RTN4-211ENST00000438462 TRIM60Q495X7 471 aa14.64□□□□□ -0.07
RTN4-211ENST00000438462 JAG2Q9Y219 1238 aa14.64□□□□□ -0.07
RTN4-211ENST00000438462 GRXCR1A8MXD5 290 aa14.63□□□□□ -0.07
RTN4-211ENST00000438462 HTATSF1O43719 755 aaKnown RBP14.63□□□□□ -0.07
RTN4-211ENST00000438462 CYP2B6P20813 491 aa14.63□□□□□ -0.07
RTN4-211ENST00000438462 FAM110CQ1W6H9 321 aa14.63□□□□□ -0.07
RTN4-211ENST00000438462 LEMD3Q9Y2U8 911 aa14.63□□□□□ -0.07
RTN4-211ENST00000438462 DLG5Q8TDM6 1919 aa14.62□□□□□ -0.07
RTN4-211ENST00000438462 DCAF15Q66K64 600 aa14.62□□□□□ -0.07
RTN4-211ENST00000438462 GADL1Q6ZQY3 521 aa14.62□□□□□ -0.07
RTN4-211ENST00000438462 HERVK_113Q902F9 699 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 165.3 ms