RNA–Protein interactions for RNA: ENST00000434667.3

SCAF4-203, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 3,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-203ENST00000434667 ZNF496Q96IT1 587 aaPredicted RBP12.06□□□□□ -0.48
SCAF4-203ENST00000434667 RABEP2Q9H5N1 569 aa12.06□□□□□ -0.48
SCAF4-203ENST00000434667 ANKRD36CQ5JPF3 1778 aa12.06□□□□□ -0.48
SCAF4-203ENST00000434667 NWD2Q9ULI1 1742 aa12.06□□□□□ -0.48
SCAF4-203ENST00000434667 HDGFP51858 240 aaKnown RBP12.06□□□□□ -0.48
SCAF4-203ENST00000434667 NLRP12P59046 1061 aa12.06□□□□□ -0.48
SCAF4-203ENST00000434667 TPM4P67936 248 aa12.06□□□□□ -0.48
SCAF4-203ENST00000434667 GDAP1L1Q96MZ0 367 aa12.06□□□□□ -0.48
SCAF4-203ENST00000434667 PPP2R2CQ9Y2T4 447 aa12.06□□□□□ -0.48
SCAF4-203ENST00000434667 SPEF2Q9C093 1822 aa12.06□□□□□ -0.48
SCAF4-203ENST00000434667 AXDND1Q5T1B0 1012 aaPredicted RBP12.06□□□□□ -0.48
SCAF4-203ENST00000434667 CC2D1AQ6P1N0 951 aaPredicted RBP12.06□□□□□ -0.48
SCAF4-203ENST00000434667 CCDC150Q8NCX0 1101 aa12.06□□□□□ -0.48
SCAF4-203ENST00000434667 ECM29Q5VYK3 1845 aa12.06□□□□□ -0.48
SCAF4-203ENST00000434667 ADORA1P30542 326 aa12.05□□□□□ -0.48
SCAF4-203ENST00000434667 SYKP43405 635 aa12.05□□□□□ -0.48
SCAF4-203ENST00000434667 STX17P56962 302 aa12.05□□□□□ -0.48
SCAF4-203ENST00000434667 SHC4Q6S5L8 630 aa12.05□□□□□ -0.48
SCAF4-203ENST00000434667 GOLGA6L1Q8N7Z2 621 aa12.05□□□□□ -0.48
SCAF4-203ENST00000434667 KBTBD3Q8NAB2 608 aa12.05□□□□□ -0.48
SCAF4-203ENST00000434667 MRPL44Q9H9J2 332 aaKnown RBP12.05□□□□□ -0.48
SCAF4-203ENST00000434667 DDX21Q9NR30 783 aaKnown RBP eCLIP12.05□□□□□ -0.48
SCAF4-203ENST00000434667 RTEL1Q9NZ71 1219 aa12.05□□□□□ -0.48
SCAF4-203ENST00000434667 DDX58O95786 925 aaKnown RBP12.05□□□□□ -0.48
SCAF4-203ENST00000434667 CAVIN2O95810 425 aa12.05□□□□□ -0.48
SCAF4-203ENST00000434667 RHOXF2BP0C7M4 288 aa12.05□□□□□ -0.48
SCAF4-203ENST00000434667 PSME1Q06323 249 aa12.05□□□□□ -0.48
SCAF4-203ENST00000434667 SCARF1Q14162 830 aa12.05□□□□□ -0.48
SCAF4-203ENST00000434667 PLEKHO1Q53GL0 409 aaPredicted RBP12.05□□□□□ -0.48
SCAF4-203ENST00000434667 IP6K1Q92551 441 aa12.05□□□□□ -0.48
SCAF4-203ENST00000434667 HAUS7Q99871 368 aa12.05□□□□□ -0.48
SCAF4-203ENST00000434667 RHOXF2Q9BQY4 288 aa12.05□□□□□ -0.48
SCAF4-203ENST00000434667 SOWAHDA6NJG2 315 aa12.05□□□□□ -0.48
SCAF4-203ENST00000434667 PRC1O43663 620 aa12.05□□□□□ -0.48
SCAF4-203ENST00000434667 PRR29P0C7W0 189 aa12.05□□□□□ -0.48
SCAF4-203ENST00000434667 PPP2R3AQ06190 1150 aa12.05□□□□□ -0.48
SCAF4-203ENST00000434667 FMR1Q06787 632 aaKnown RBP eCLIP12.05□□□□□ -0.488e-7■■■■■ 28.2
SCAF4-203ENST00000434667 KLHL10Q6JEL2 608 aa12.05□□□□□ -0.48
SCAF4-203ENST00000434667 ANKRD13DQ6ZTN6 518 aa12.05□□□□□ -0.48
SCAF4-203ENST00000434667 SEC31BQ9NQW1 1179 aa12.05□□□□□ -0.48
SCAF4-203ENST00000434667 RSPH14Q9UHP6 348 aa12.05□□□□□ -0.48
SCAF4-203ENST00000434667 PSDA5PKW4 1024 aaPredicted RBP12.04□□□□□ -0.48
SCAF4-203ENST00000434667 CASQ1P31415 396 aa12.04□□□□□ -0.48
SCAF4-203ENST00000434667 GPS2Q13227 327 aa12.04□□□□□ -0.48
SCAF4-203ENST00000434667 ZSCAN26Q16670 478 aa12.04□□□□□ -0.48
SCAF4-203ENST00000434667 ANO1Q5XXA6 986 aa12.04□□□□□ -0.48
SCAF4-203ENST00000434667 MICU3Q86XE3 530 aa12.04□□□□□ -0.48
SCAF4-203ENST00000434667 CCDC12Q8WUD4 166 aaPredicted RBP12.04□□□□□ -0.48
SCAF4-203ENST00000434667 ALDH8A1Q9H2A2 487 aaPredicted RBP12.04□□□□□ -0.48
SCAF4-203ENST00000434667 ARGLU1Q9NWB6 273 aaPredicted RBP12.04□□□□□ -0.48
SCAF4-203ENST00000434667 VPS18Q9P253 973 aa12.04□□□□□ -0.48
SCAF4-203ENST00000434667 HPS5Q9UPZ3 1129 aa12.04□□□□□ -0.48
SCAF4-203ENST00000434667 PCDHA5Q9Y5H7 936 aa12.04□□□□□ -0.48
SCAF4-203ENST00000434667 DCCP43146 1447 aa12.04□□□□□ -0.48
SCAF4-203ENST00000434667 SALL1Q9NSC2 1324 aa12.04□□□□□ -0.48
SCAF4-203ENST00000434667 PDE11AQ9HCR9 933 aa12.04□□□□□ -0.48
SCAF4-203ENST00000434667 SAMSN1Q9NSI8 373 aaKnown RBP12.04□□□□□ -0.48
SCAF4-203ENST00000434667 LRP5O75197 1615 aa12.04□□□□□ -0.48
SCAF4-203ENST00000434667 TULP2O00295 520 aa12.04□□□□□ -0.48
SCAF4-203ENST00000434667 APPP05067 770 aa12.03□□□□□ -0.48
SCAF4-203ENST00000434667 IFIT1P09914 478 aaKnown RBP12.03□□□□□ -0.48
SCAF4-203ENST00000434667 AEBP2Q6ZN18 517 aaPredicted RBP12.03□□□□□ -0.48
SCAF4-203ENST00000434667 METTL16Q86W50 562 aaKnown RBP12.03□□□□□ -0.48
SCAF4-203ENST00000434667 SMYD4Q8IYR2 804 aaPredicted RBP12.03□□□□□ -0.48
SCAF4-203ENST00000434667 FBXO18Q8NFZ0 1043 aa12.03□□□□□ -0.48
SCAF4-203ENST00000434667 IMPACTQ9P2X3 320 aa12.03□□□□□ -0.48
SCAF4-203ENST00000434667 FOXP2O15409 715 aa12.03□□□□□ -0.48
SCAF4-203ENST00000434667 TRHP20396 242 aaPredicted RBP12.03□□□□□ -0.48
SCAF4-203ENST00000434667 ANTXR2P58335 489 aa12.03□□□□□ -0.48
SCAF4-203ENST00000434667 USP49Q70CQ1 688 aa12.03□□□□□ -0.48
SCAF4-203ENST00000434667 TMEM139Q8IV31 216 aa12.03□□□□□ -0.48
SCAF4-203ENST00000434667 ANKRD24Q8TF21 1146 aa12.03□□□□□ -0.48
SCAF4-203ENST00000434667 STAMQ92783 540 aa12.03□□□□□ -0.48
SCAF4-203ENST00000434667 CCDC102AQ96A19 550 aa12.03□□□□□ -0.48
SCAF4-203ENST00000434667 PUS7LQ9H0K6 701 aaKnown RBP12.03□□□□□ -0.48
SCAF4-203ENST00000434667 ZBTB3Q9H5J0 574 aa12.03□□□□□ -0.48
SCAF4-203ENST00000434667 TFR2Q9UP52 801 aa12.03□□□□□ -0.48
SCAF4-203ENST00000434667 KCPQ6ZWJ8 1503 aa12.03□□□□□ -0.48
SCAF4-203ENST00000434667 TEX33O43247 280 aa12.03□□□□□ -0.48
SCAF4-203ENST00000434667 FGAP02671 866 aa12.03□□□□□ -0.48
SCAF4-203ENST00000434667 ADAM21Q9UKJ8 722 aa12.03□□□□□ -0.48
SCAF4-203ENST00000434667 UTYO14607 1347 aa12.03□□□□□ -0.48
SCAF4-203ENST00000434667 KIF23Q02241 960 aaPredicted RBP12.02□□□□□ -0.48
SCAF4-203ENST00000434667 ZNF790Q6PG37 636 aa12.02□□□□□ -0.48
SCAF4-203ENST00000434667 GPIHBP1Q8IV16 184 aa12.02□□□□□ -0.48
SCAF4-203ENST00000434667 BAG1Q99933 345 aaPredicted RBP12.02□□□□□ -0.48
SCAF4-203ENST00000434667 LLPHQ9BRT6 129 aaKnown RBP12.02□□□□□ -0.48
SCAF4-203ENST00000434667 LAMB2P55268 1798 aa12.02□□□□□ -0.48
SCAF4-203ENST00000434667 LRRFIP1Q32MZ4 808 aaKnown RBP12.02□□□□□ -0.49
SCAF4-203ENST00000434667 ORAI2Q96SN7 254 aa12.02□□□□□ -0.49
SCAF4-203ENST00000434667 PNKPQ96T60 521 aa12.02□□□□□ -0.49
SCAF4-203ENST00000434667 METTL22Q9BUU2 404 aaPredicted RBP12.02□□□□□ -0.49
SCAF4-203ENST00000434667 MYL5Q02045 173 aa12.02□□□□□ -0.49
SCAF4-203ENST00000434667 LRP10Q7Z4F1 713 aa12.02□□□□□ -0.49
SCAF4-203ENST00000434667 VPS37DQ86XT2 251 aa12.02□□□□□ -0.49
SCAF4-203ENST00000434667 DDX17Q92841 729 aaKnown RBP12.02□□□□□ -0.49
SCAF4-203ENST00000434667 FUT8Q9BYC5 575 aa12.02□□□□□ -0.49
SCAF4-203ENST00000434667 KCNJ14Q9UNX9 436 aa12.02□□□□□ -0.49
SCAF4-203ENST00000434667 PHF8Q9UPP1 1060 aa12.02□□□□□ -0.49
SCAF4-203ENST00000434667 LONRF2Q1L5Z9 754 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms