RNA–Protein interactions for RNA: ENST00000434453.1

LMBR1-209, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 2,229 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-209ENST00000434453 TACC3Q9Y6A5 838 aa28.91■■■□□ 2.22
LMBR1-209ENST00000434453 C16orf45Q96MC5 204 aaPredicted RBP28.9■■■□□ 2.22
LMBR1-209ENST00000434453 ALG1Q9BT22 464 aa28.9■■■□□ 2.22
LMBR1-209ENST00000434453 BCL2L12Q9HB09 334 aa28.9■■■□□ 2.22
LMBR1-209ENST00000434453 ZNF202O95125 648 aa28.9■■■□□ 2.22
LMBR1-209ENST00000434453 CHAF1AQ13111 956 aaPredicted RBP28.9■■■□□ 2.22
LMBR1-209ENST00000434453 ALX1Q15699 326 aa28.9■■■□□ 2.22
LMBR1-209ENST00000434453 NTRK3Q16288 839 aa28.9■■■□□ 2.22
LMBR1-209ENST00000434453 SYTL4Q96C24 671 aaPredicted RBP28.9■■■□□ 2.22
LMBR1-209ENST00000434453 FAM217BQ9NTX9 383 aaPredicted RBP28.9■■■□□ 2.22
LMBR1-209ENST00000434453 PLCH1Q4KWH8 1693 aa28.9■■■□□ 2.22
LMBR1-209ENST00000434453 MROH5Q6ZUA9 1318 aa28.89■■■□□ 2.22
LMBR1-209ENST00000434453 PHKBQ93100 1093 aa28.89■■■□□ 2.22
LMBR1-209ENST00000434453 LY9Q9HBG7 655 aa28.89■■■□□ 2.22
LMBR1-209ENST00000434453 COL14A1Q05707 1796 aaKnown RBP28.89■■■□□ 2.21
LMBR1-209ENST00000434453 CMA1P23946 247 aa28.89■■■□□ 2.21
LMBR1-209ENST00000434453 RASGRF1Q13972 1273 aa28.89■■■□□ 2.21
LMBR1-209ENST00000434453 SLC39A14Q15043 492 aa28.89■■■□□ 2.21
LMBR1-209ENST00000434453 VPS37DQ86XT2 251 aa28.89■■■□□ 2.21
LMBR1-209ENST00000434453 SPATA5Q8NB90 893 aa28.89■■■□□ 2.21
LMBR1-209ENST00000434453 PFKFB1P16118 471 aa28.88■■■□□ 2.21
LMBR1-209ENST00000434453 KRT40Q6A162 431 aa28.88■■■□□ 2.21
LMBR1-209ENST00000434453 MICU3Q86XE3 530 aa28.88■■■□□ 2.21
LMBR1-209ENST00000434453 AIDAQ96BJ3 306 aa28.88■■■□□ 2.21
LMBR1-209ENST00000434453 TMEM87BQ96K49 555 aa28.88■■■□□ 2.21
LMBR1-209ENST00000434453 NAT10Q9H0A0 1025 aaKnown RBP28.88■■■□□ 2.21
LMBR1-209ENST00000434453 RANBP6O60518 1105 aaKnown RBP28.88■■■□□ 2.21
LMBR1-209ENST00000434453 DOT1LQ8TEK3 1739 aa28.87■■■□□ 2.21
LMBR1-209ENST00000434453 RBM6P78332 1123 aaKnown RBP28.87■■■□□ 2.21
LMBR1-209ENST00000434453 NBPF11Q86T75 865 aa28.87■■■□□ 2.21
LMBR1-209ENST00000434453 SGMS1Q86VZ5 419 aa28.87■■■□□ 2.21
LMBR1-209ENST00000434453 CTIFO43310 598 aaKnown RBP28.86■■■□□ 2.21
LMBR1-209ENST00000434453 MARCKSP29966 332 aaPredicted RBP28.86■■■□□ 2.21
LMBR1-209ENST00000434453 SUSD4Q5VX71 490 aa28.86■■■□□ 2.21
LMBR1-209ENST00000434453 BPIFA3Q9BQP9 254 aa28.86■■■□□ 2.21
LMBR1-209ENST00000434453 MYL10Q9BUA6 226 aa28.86■■■□□ 2.21
LMBR1-209ENST00000434453 WNK3Q9BYP7 1800 aa28.86■■■□□ 2.21
LMBR1-209ENST00000434453 UBE2Q2LH0YL09 131 aa28.86■■■□□ 2.21
LMBR1-209ENST00000434453 PTPAQ15257 358 aa28.86■■■□□ 2.21
LMBR1-209ENST00000434453 MAGEB6Q8N7X4 407 aa28.86■■■□□ 2.21
LMBR1-209ENST00000434453 PATL2C9JE40 543 aaKnown RBP28.85■■■□□ 2.21
LMBR1-209ENST00000434453 ZBTB43O43298 467 aa28.85■■■□□ 2.21
LMBR1-209ENST00000434453 CDKL5O76039 1030 aa28.85■■■□□ 2.21
LMBR1-209ENST00000434453 SLC3A2P08195 630 aaKnown RBP28.85■■■□□ 2.21
LMBR1-209ENST00000434453 IFNL3Q8IZI9 196 aa28.85■■■□□ 2.21
LMBR1-209ENST00000434453 TIAM2Q8IVF5 1701 aa28.85■■■□□ 2.21
LMBR1-209ENST00000434453 MBD4O95243 580 aa28.85■■■□□ 2.21
LMBR1-209ENST00000434453 EIF5P55010 431 aaKnown RBP28.85■■■□□ 2.21
LMBR1-209ENST00000434453 CCZ1BP86790 482 aa28.85■■■□□ 2.21
LMBR1-209ENST00000434453 CCZ1P86791 482 aaPredicted RBP28.85■■■□□ 2.21
LMBR1-209ENST00000434453 CTDSPL2Q05D32 466 aa28.85■■■□□ 2.21
LMBR1-209ENST00000434453 SEC31BQ9NQW1 1179 aa28.85■■■□□ 2.21
LMBR1-209ENST00000434453 ZSWIM5Q9P217 1185 aa28.85■■■□□ 2.21
LMBR1-209ENST00000434453 FILIP1Q7Z7B0 1213 aa28.84■■■□□ 2.21
LMBR1-209ENST00000434453 MAP3K14Q99558 947 aa28.84■■■□□ 2.21
LMBR1-209ENST00000434453 USP27XA6NNY8 438 aa28.84■■■□□ 2.21
LMBR1-209ENST00000434453 EXOC5O00471 708 aa28.84■■■□□ 2.21
LMBR1-209ENST00000434453 BIN1O00499 593 aa28.84■■■□□ 2.21
LMBR1-209ENST00000434453 NEMFO60524 1076 aa28.84■■■□□ 2.21
LMBR1-209ENST00000434453 TNNT1P13805 278 aa28.84■■■□□ 2.21
LMBR1-209ENST00000434453 SLC5A1P13866 664 aa28.84■■■□□ 2.21
LMBR1-209ENST00000434453 TMEM67Q5HYA8 995 aa28.84■■■□□ 2.21
LMBR1-209ENST00000434453 AK7Q96M32 723 aa28.84■■■□□ 2.21
LMBR1-209ENST00000434453 BCORQ6W2J9 1755 aa28.83■■■□□ 2.21
LMBR1-209ENST00000434453 ARID3AQ99856 593 aa28.83■■■□□ 2.21
LMBR1-209ENST00000434453 ARMT1Q9H993 441 aa28.83■■■□□ 2.21
LMBR1-209ENST00000434453 HPSEQ9Y251 543 aa28.83■■■□□ 2.21
LMBR1-209ENST00000434453 PHLPP1O60346 1717 aa28.83■■■□□ 2.21
LMBR1-209ENST00000434453 CCDC69A6NI79 296 aa28.82■■■□□ 2.2
LMBR1-209ENST00000434453 GSG1L2A8MUP6 293 aa28.82■■■□□ 2.2
LMBR1-209ENST00000434453 U2AF2P26368 475 aaKnown RBP eCLIP28.82■■■□□ 2.24e-6■■■■□ 20.4
LMBR1-209ENST00000434453 LIFRP42702 1097 aa28.82■■■□□ 2.2
LMBR1-209ENST00000434453 NLRP12P59046 1061 aa28.82■■■□□ 2.2
LMBR1-209ENST00000434453 INTS5Q6P9B9 1019 aaKnown RBP28.82■■■□□ 2.2
LMBR1-209ENST00000434453 SHC4Q6S5L8 630 aa28.82■■■□□ 2.2
LMBR1-209ENST00000434453 COL16A1Q07092 1604 aaPredicted RBP28.82■■■□□ 2.2
LMBR1-209ENST00000434453 SKILP12757 684 aa28.82■■■□□ 2.2
LMBR1-209ENST00000434453 NCAPHQ15003 741 aa28.82■■■□□ 2.2
LMBR1-209ENST00000434453 GOLGA8AA7E2F4 631 aa28.81■■■□□ 2.2
LMBR1-209ENST00000434453 MAP3K12Q12852 859 aa28.81■■■□□ 2.2
LMBR1-209ENST00000434453 NFXL1Q6ZNB6 911 aa28.81■■■□□ 2.2
LMBR1-209ENST00000434453 NAPBQ9H115 298 aa28.81■■■□□ 2.2
LMBR1-209ENST00000434453 PPP6R2O75170 966 aa28.81■■■□□ 2.2
LMBR1-209ENST00000434453 IARSP41252 1262 aaKnown RBP28.81■■■□□ 2.2
LMBR1-209ENST00000434453 TPD52L1Q16890 204 aaPredicted RBP28.81■■■□□ 2.2
LMBR1-209ENST00000434453 MYH14Q7Z406 1995 aaKnown RBP28.8■■■□□ 2.2
LMBR1-209ENST00000434453 PRKAB2O43741 272 aa28.8■■■□□ 2.2
LMBR1-209ENST00000434453 CPLX2Q6PUV4 134 aaKnown RBP28.8■■■□□ 2.2
LMBR1-209ENST00000434453 TAOK2Q9UL54 1235 aa28.8■■■□□ 2.2
LMBR1-209ENST00000434453 TIGD1Q96MW7 591 aa28.79■■■□□ 2.2
LMBR1-209ENST00000434453 OSBPL5Q9H0X9 879 aaPredicted RBP28.79■■■□□ 2.2
LMBR1-209ENST00000434453 SMTNL1A8MU46 457 aa28.79■■■□□ 2.2
LMBR1-209ENST00000434453 AKNAD1Q5T1N1 836 aa28.79■■■□□ 2.2
LMBR1-209ENST00000434453 ANKRD7Q92527 254 aa28.79■■■□□ 2.2
LMBR1-209ENST00000434453 FAM237AA0A1B0GTK4 181 aa28.78■■■□□ 2.2
LMBR1-209ENST00000434453 SYKP43405 635 aa28.78■■■□□ 2.2
LMBR1-209ENST00000434453 BCAMP50895 628 aa28.78■■■□□ 2.2
LMBR1-209ENST00000434453 MPHOSPH8Q99549 860 aa28.78■■■□□ 2.2
LMBR1-209ENST00000434453 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.78■■■□□ 2.2
LMBR1-209ENST00000434453 COL4A1P02462 1669 aa28.78■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms