RNA–Protein interactions for RNA: ENST00000434425.5

RFC3-202, Transcript of replication factor C subunit 3, humanhuman

TSL 5 BASIC

Gene RFC3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-202ENST00000434425 CFAP99D6REC4 459 aa6.65□□□□□ -1.35
RFC3-202ENST00000434425 GRIN3BO60391 1043 aa6.65□□□□□ -1.35
RFC3-202ENST00000434425 GPR37L1O60883 481 aa6.65□□□□□ -1.35
RFC3-202ENST00000434425 RNASEH2AO75792 299 aaKnown RBP6.65□□□□□ -1.35
RFC3-202ENST00000434425 NAT1P18440 290 aa6.65□□□□□ -1.35
RFC3-202ENST00000434425 FBLN1P23142 703 aa6.65□□□□□ -1.35
RFC3-202ENST00000434425 CTHP32929 405 aa6.65□□□□□ -1.35
RFC3-202ENST00000434425 USP5P45974 858 aa6.65□□□□□ -1.35
RFC3-202ENST00000434425 DCTN1Q14203 1278 aa6.65□□□□□ -1.35
RFC3-202ENST00000434425 IQCEQ6IPM2 695 aa6.65□□□□□ -1.35
RFC3-202ENST00000434425 KANK3Q6NY19 840 aa6.65□□□□□ -1.35
RFC3-202ENST00000434425 PDXDC1Q6P996 788 aa6.65□□□□□ -1.35
RFC3-202ENST00000434425 RNF217Q8TC41 542 aa6.65□□□□□ -1.35
RFC3-202ENST00000434425 TMC1Q8TDI8 760 aa6.65□□□□□ -1.35
RFC3-202ENST00000434425 CCDC47Q96A33 483 aaKnown RBP6.65□□□□□ -1.35
RFC3-202ENST00000434425 FMNL2Q96PY5 1086 aa6.65□□□□□ -1.35
RFC3-202ENST00000434425 MPHOSPH6Q99547 160 aaKnown RBP6.65□□□□□ -1.35
RFC3-202ENST00000434425 SLC4A5Q9BY07 1137 aa6.65□□□□□ -1.35
RFC3-202ENST00000434425 SLC12A5Q9H2X9 1139 aa6.65□□□□□ -1.35
RFC3-202ENST00000434425 PRKAB1Q9Y478 270 aa6.65□□□□□ -1.35
RFC3-202ENST00000434425 KIF7Q2M1P5 1343 aa6.65□□□□□ -1.35
RFC3-202ENST00000434425 CD163L1Q9NR16 1453 aa6.64□□□□□ -1.35
RFC3-202ENST00000434425 PALM3A6NDB9 673 aaPredicted RBP6.64□□□□□ -1.35
RFC3-202ENST00000434425 RBP3P10745 1247 aa6.64□□□□□ -1.35
RFC3-202ENST00000434425 XRCC5P13010 732 aaKnown RBP6.64□□□□□ -1.35
RFC3-202ENST00000434425 USP46P62068 366 aa6.64□□□□□ -1.35
RFC3-202ENST00000434425 CCDC93Q567U6 631 aa6.64□□□□□ -1.35
RFC3-202ENST00000434425 HSP90B2PQ58FF3 399 aa6.64□□□□□ -1.35
RFC3-202ENST00000434425 MSL1Q68DK7 614 aa6.64□□□□□ -1.35
RFC3-202ENST00000434425 PPP1R18Q6NYC8 613 aa6.64□□□□□ -1.35
RFC3-202ENST00000434425 IP6K1Q92551 441 aa6.64□□□□□ -1.35
RFC3-202ENST00000434425 ERP27Q96DN0 273 aa6.64□□□□□ -1.35
RFC3-202ENST00000434425 PAIP2Q9BPZ3 127 aaKnown RBP6.64□□□□□ -1.35
RFC3-202ENST00000434425 TGIF2Q9GZN2 237 aa6.64□□□□□ -1.35
RFC3-202ENST00000434425 ZNF700Q9H0M5 742 aa6.64□□□□□ -1.35
RFC3-202ENST00000434425 CHST12Q9NRB3 414 aa6.64□□□□□ -1.35
RFC3-202ENST00000434425 MON2Q7Z3U7 1717 aa6.64□□□□□ -1.35
RFC3-202ENST00000434425 RGPD2P0DJD1 1756 aa6.64□□□□□ -1.35
RFC3-202ENST00000434425 ROCK2O75116 1388 aaKnown RBP6.64□□□□□ -1.35
RFC3-202ENST00000434425 LY75O60449 1722 aa6.63□□□□□ -1.35
RFC3-202ENST00000434425 TBX3O15119 743 aa6.63□□□□□ -1.35
RFC3-202ENST00000434425 PLIN1O60240 522 aa6.63□□□□□ -1.35
RFC3-202ENST00000434425 WASHC5Q12768 1159 aa6.63□□□□□ -1.35
RFC3-202ENST00000434425 KLHL10Q6JEL2 608 aa6.63□□□□□ -1.35
RFC3-202ENST00000434425 HSCBQ8IWL3 235 aa6.63□□□□□ -1.35
RFC3-202ENST00000434425 CCDC89Q8N998 374 aa6.63□□□□□ -1.35
RFC3-202ENST00000434425 MIGA1Q8NAN2 632 aa6.63□□□□□ -1.35
RFC3-202ENST00000434425 EPS8L1Q8TE68 723 aa6.63□□□□□ -1.35
RFC3-202ENST00000434425 LRRN4Q8WUT4 740 aa6.63□□□□□ -1.35
RFC3-202ENST00000434425 AS3MTQ9HBK9 375 aa6.63□□□□□ -1.35
RFC3-202ENST00000434425 POLG2Q9UHN1 485 aa6.63□□□□□ -1.35
RFC3-202ENST00000434425 CCNL1Q9UK58 526 aaPredicted RBP6.63□□□□□ -1.35
RFC3-202ENST00000434425 NSD2O96028 1365 aa6.63□□□□□ -1.35
RFC3-202ENST00000434425 BHMG1C9JSJ3 638 aaPredicted RBP6.62□□□□□ -1.35
RFC3-202ENST00000434425 TNFRSF10BO14763 440 aa6.62□□□□□ -1.35
RFC3-202ENST00000434425 CFHP08603 1231 aa6.62□□□□□ -1.35
RFC3-202ENST00000434425 KCNA2P16389 499 aa6.62□□□□□ -1.35
RFC3-202ENST00000434425 CASQ1P31415 396 aa6.62□□□□□ -1.35
RFC3-202ENST00000434425 CASP2P42575 452 aa6.62□□□□□ -1.35
RFC3-202ENST00000434425 IFT88Q13099 833 aa6.62□□□□□ -1.35
RFC3-202ENST00000434425 MTMR2Q13614 643 aa6.62□□□□□ -1.35
RFC3-202ENST00000434425 PLEKHG4Q58EX7 1191 aa6.62□□□□□ -1.35
RFC3-202ENST00000434425 NYAP1Q6ZVC0 841 aa6.62□□□□□ -1.35
RFC3-202ENST00000434425 TAS1R3Q7RTX0 852 aa6.62□□□□□ -1.35
RFC3-202ENST00000434425 NDUFAF2Q8N183 169 aa6.62□□□□□ -1.35
RFC3-202ENST00000434425 NGEFQ8N5V2 710 aa6.62□□□□□ -1.35
RFC3-202ENST00000434425 CFAP53Q96M91 514 aa6.62□□□□□ -1.35
RFC3-202ENST00000434425 TMX1Q9H3N1 280 aa6.62□□□□□ -1.35
RFC3-202ENST00000434425 CLIC5Q9NZA1 410 aa6.62□□□□□ -1.35
RFC3-202ENST00000434425 ISY1Q9ULR0 285 aaKnown RBP6.62□□□□□ -1.35
RFC3-202ENST00000434425 ZBED9Q6R2W3 1325 aa6.62□□□□□ -1.35
RFC3-202ENST00000434425 ANKRD36BQ8N2N9 1353 aa6.62□□□□□ -1.35
RFC3-202ENST00000434425 PABPN1LA6NDY0 278 aaKnown RBP6.61□□□□□ -1.35
RFC3-202ENST00000434425 RPN1P04843 607 aaKnown RBP6.61□□□□□ -1.35
RFC3-202ENST00000434425 HSPA6P17066 643 aa6.61□□□□□ -1.35
RFC3-202ENST00000434425 RRM1P23921 792 aa6.61□□□□□ -1.35
RFC3-202ENST00000434425 LMOD1P29536 600 aaPredicted RBP6.61□□□□□ -1.35
RFC3-202ENST00000434425 PDE6BP35913 854 aa6.61□□□□□ -1.35
RFC3-202ENST00000434425 ZNF132P52740 706 aa6.61□□□□□ -1.35
RFC3-202ENST00000434425 HNRNPUQ00839 825 aaKnown RBP eCLIP6.61□□□□□ -1.35
RFC3-202ENST00000434425 SYCP2LQ5T4T6 812 aa6.61□□□□□ -1.35
RFC3-202ENST00000434425 USP54Q70EL1 1684 aa6.61□□□□□ -1.35
RFC3-202ENST00000434425 SMIM5Q71RC9 77 aa6.61□□□□□ -1.35
RFC3-202ENST00000434425 HDGFL2Q7Z4V5 671 aaPredicted RBP6.61□□□□□ -1.35
RFC3-202ENST00000434425 SLF2Q8IX21 1173 aa6.61□□□□□ -1.35
RFC3-202ENST00000434425 ZNF687Q8N1G0 1237 aa6.61□□□□□ -1.35
RFC3-202ENST00000434425 PAF1Q8N7H5 531 aa6.61□□□□□ -1.35
RFC3-202ENST00000434425 TEX19Q8NA77 164 aa6.61□□□□□ -1.35
RFC3-202ENST00000434425 PRPF38AQ8NAV1 312 aaKnown RBP6.61□□□□□ -1.35
RFC3-202ENST00000434425 USP47Q96K76 1375 aa6.61□□□□□ -1.35
RFC3-202ENST00000434425 LGR6Q9HBX8 967 aa6.61□□□□□ -1.35
RFC3-202ENST00000434425 ARNT2Q9HBZ2 717 aa6.61□□□□□ -1.35
RFC3-202ENST00000434425 ATP10DQ9P241 1426 aa6.61□□□□□ -1.35
RFC3-202ENST00000434425 CD2APQ9Y5K6 639 aa6.61□□□□□ -1.35
RFC3-202ENST00000434425 DOT1LQ8TEK3 1739 aa6.61□□□□□ -1.35
RFC3-202ENST00000434425 CHL1O00533 1208 aa6.6□□□□□ -1.35
RFC3-202ENST00000434425 RNF40O75150 1001 aa6.6□□□□□ -1.35
RFC3-202ENST00000434425 CAND2O75155 1236 aa6.6□□□□□ -1.35
RFC3-202ENST00000434425 HOXC9P31274 260 aa6.6□□□□□ -1.35
RFC3-202ENST00000434425 TSPAN7P41732 249 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms