RNA–Protein interactions for RNA: ENST00000432796.2

HOXD3-203, Transcript of homeobox D3, humanhuman

TSL 3

Gene HOXD3, Length 428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-203ENST00000432796 ZNF697Q5TEC3 545 aa13.05□□□□□ -0.32
HOXD3-203ENST00000432796 C15orf52Q6ZUT6 534 aaKnown RBP13.05□□□□□ -0.32
HOXD3-203ENST00000432796 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.05□□□□□ -0.32
HOXD3-203ENST00000432796 ZKSCAN4Q969J2 545 aaPredicted RBP13.05□□□□□ -0.32
HOXD3-203ENST00000432796 PARK7Q99497 189 aaKnown RBP13.05□□□□□ -0.32
HOXD3-203ENST00000432796 NBPF3Q9H094 633 aa13.05□□□□□ -0.32
HOXD3-203ENST00000432796 SERPINA10Q9UK55 444 aa13.05□□□□□ -0.32
HOXD3-203ENST00000432796 HOXD11P31277 338 aaPredicted RBP13.04□□□□□ -0.32
HOXD3-203ENST00000432796 WWC1Q8IX03 1113 aa13.04□□□□□ -0.32
HOXD3-203ENST00000432796 CDX2Q99626 313 aaPredicted RBP13.04□□□□□ -0.32
HOXD3-203ENST00000432796 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.04□□□□□ -0.32
HOXD3-203ENST00000432796 ALPK3Q96L96 1907 aa13.03□□□□□ -0.32
HOXD3-203ENST00000432796 TNFRSF10AO00220 468 aa13.03□□□□□ -0.32
HOXD3-203ENST00000432796 ZNF804AQ7Z570 1209 aa13.03□□□□□ -0.32
HOXD3-203ENST00000432796 DZIP1LQ8IYY4 767 aaKnown RBP13.03□□□□□ -0.32
HOXD3-203ENST00000432796 C8orf58Q8NAV2 365 aa13.03□□□□□ -0.32
HOXD3-203ENST00000432796 MPHOSPH8Q99549 860 aa13.03□□□□□ -0.32
HOXD3-203ENST00000432796 C11orf49Q9H6J7 331 aa13.03□□□□□ -0.32
HOXD3-203ENST00000432796 MYH16Q9H6N6 1097 aa13.03□□□□□ -0.32
HOXD3-203ENST00000432796 KCNH4Q9UQ05 1017 aa13.03□□□□□ -0.32
HOXD3-203ENST00000432796 CHRNDQ07001 517 aa13.02□□□□□ -0.33
HOXD3-203ENST00000432796 MOGSQ13724 837 aa13.02□□□□□ -0.33
HOXD3-203ENST00000432796 TSR2Q969E8 191 aaKnown RBP13.02□□□□□ -0.33
HOXD3-203ENST00000432796 HOOK2Q96ED9 719 aa13.02□□□□□ -0.33
HOXD3-203ENST00000432796 METTL22Q9BUU2 404 aaPredicted RBP13.02□□□□□ -0.33
HOXD3-203ENST00000432796 PHAXQ9H814 394 aaKnown RBP13.02□□□□□ -0.33
HOXD3-203ENST00000432796 JAG2Q9Y219 1238 aa13.02□□□□□ -0.33
HOXD3-203ENST00000432796 MAP3K2Q9Y2U5 619 aa13.02□□□□□ -0.33
HOXD3-203ENST00000432796 SNAP23O00161 211 aa13.01□□□□□ -0.33
HOXD3-203ENST00000432796 TNPO2O14787 897 aaKnown RBP13.01□□□□□ -0.33
HOXD3-203ENST00000432796 CYP2C8P10632 490 aa13.01□□□□□ -0.33
HOXD3-203ENST00000432796 TJAP1Q5JTD0 557 aa13.01□□□□□ -0.33
HOXD3-203ENST00000432796 KSR2Q6VAB6 950 aa13.01□□□□□ -0.33
HOXD3-203ENST00000432796 WDR63Q8IWG1 891 aa13.01□□□□□ -0.33
HOXD3-203ENST00000432796 FAM9BQ8IZU0 186 aa13.01□□□□□ -0.33
HOXD3-203ENST00000432796 TTF2Q9UNY4 1162 aaKnown RBP13.01□□□□□ -0.33
HOXD3-203ENST00000432796 SALL2Q9Y467 1007 aaPredicted RBP13.01□□□□□ -0.33
HOXD3-203ENST00000432796 ITGA6P23229 1130 aa13□□□□□ -0.33
HOXD3-203ENST00000432796 FKBP5Q13451 457 aaPredicted RBP13□□□□□ -0.33
HOXD3-203ENST00000432796 ARAP2Q8WZ64 1704 aa12.99□□□□□ -0.33
HOXD3-203ENST00000432796 FANCIQ9NVI1 1328 aa12.99□□□□□ -0.33
HOXD3-203ENST00000432796 PI4KAP2A4QPH2 592 aa12.99□□□□□ -0.33
HOXD3-203ENST00000432796 SLC4A2P04920 1241 aa12.99□□□□□ -0.33
HOXD3-203ENST00000432796 CRKP46108 304 aa12.99□□□□□ -0.33
HOXD3-203ENST00000432796 MDM2Q00987 491 aaPredicted RBP12.99□□□□□ -0.33
HOXD3-203ENST00000432796 MFSD14BQ5SR56 506 aa12.99□□□□□ -0.33
HOXD3-203ENST00000432796 DCAF15Q66K64 600 aa12.99□□□□□ -0.33
HOXD3-203ENST00000432796 GPAT2Q6NUI2 795 aa12.99□□□□□ -0.33
HOXD3-203ENST00000432796 PI4KAP1Q8N8J0 262 aa12.99□□□□□ -0.33
HOXD3-203ENST00000432796 TAOK2Q9UL54 1235 aa12.99□□□□□ -0.33
HOXD3-203ENST00000432796 CACNA1FO60840 1977 aa12.98□□□□□ -0.33
HOXD3-203ENST00000432796 PFASO15067 1338 aa12.98□□□□□ -0.33
HOXD3-203ENST00000432796 TMEM265A0A087WTH1 108 aa12.98□□□□□ -0.33
HOXD3-203ENST00000432796 TAF5LO75529 589 aa12.98□□□□□ -0.33
HOXD3-203ENST00000432796 HMGCRP04035 888 aa12.98□□□□□ -0.33
HOXD3-203ENST00000432796 IGKV5-2P06315 115 aa12.98□□□□□ -0.33
HOXD3-203ENST00000432796 INPP5BP32019 993 aa12.98□□□□□ -0.33
HOXD3-203ENST00000432796 CCDC184Q52MB2 194 aa12.98□□□□□ -0.33
HOXD3-203ENST00000432796 TSPYL6Q8N831 410 aa12.98□□□□□ -0.33
HOXD3-203ENST00000432796 ZNF341Q9BYN7 854 aa12.98□□□□□ -0.33
HOXD3-203ENST00000432796 SEMA6BQ9H3T3 888 aa12.98□□□□□ -0.33
HOXD3-203ENST00000432796 OGDHLQ9ULD0 1010 aa12.98□□□□□ -0.33
HOXD3-203ENST00000432796 SPEF2Q9C093 1822 aa12.97□□□□□ -0.33
HOXD3-203ENST00000432796 FLIIQ13045 1269 aa12.97□□□□□ -0.33
HOXD3-203ENST00000432796 FAM83AQ86UY5 434 aa12.97□□□□□ -0.33
HOXD3-203ENST00000432796 MYLIPQ8WY64 445 aa12.97□□□□□ -0.33
HOXD3-203ENST00000432796 COA7Q96BR5 231 aa12.97□□□□□ -0.33
HOXD3-203ENST00000432796 HMX1Q9NP08 348 aaPredicted RBP12.97□□□□□ -0.33
HOXD3-203ENST00000432796 RPAP1Q9BWH6 1393 aaPredicted RBP12.96□□□□□ -0.33
HOXD3-203ENST00000432796 FOSL2P15408 326 aa12.96□□□□□ -0.33
HOXD3-203ENST00000432796 CACNB3P54284 484 aa12.96□□□□□ -0.33
HOXD3-203ENST00000432796 PLA2G12BQ9BX93 195 aa12.96□□□□□ -0.33
HOXD3-203ENST00000432796 TMOD2Q9NZR1 351 aa12.96□□□□□ -0.33
HOXD3-203ENST00000432796 CXCL11O14625 94 aa12.95□□□□□ -0.34
HOXD3-203ENST00000432796 COL6A1P12109 1028 aa12.95□□□□□ -0.34
HOXD3-203ENST00000432796 MAP3K12Q12852 859 aa12.95□□□□□ -0.34
HOXD3-203ENST00000432796 FKBP1CQ5VVH2 108 aa12.95□□□□□ -0.34
HOXD3-203ENST00000432796 UBE3BQ7Z3V4 1068 aa12.95□□□□□ -0.34
HOXD3-203ENST00000432796 DNAAF4Q8WXU2 420 aa12.95□□□□□ -0.34
HOXD3-203ENST00000432796 LBHD1Q9BQE6 289 aaPredicted RBP12.95□□□□□ -0.34
HOXD3-203ENST00000432796 MYH3P11055 1940 aa12.95□□□□□ -0.34
HOXD3-203ENST00000432796 NEURL1BA8MQ27 555 aa12.94□□□□□ -0.34
HOXD3-203ENST00000432796 CSF1RP07333 972 aa12.94□□□□□ -0.34
HOXD3-203ENST00000432796 HDLBPQ00341 1268 aaKnown RBP12.94□□□□□ -0.34
HOXD3-203ENST00000432796 EXOSC9Q06265 439 aaKnown RBP12.94□□□□□ -0.34
HOXD3-203ENST00000432796 NOL9Q5SY16 702 aaKnown RBP12.94□□□□□ -0.34
HOXD3-203ENST00000432796 MIGA2Q7L4E1 593 aa12.94□□□□□ -0.34
HOXD3-203ENST00000432796 FASTKD5Q7L8L6 764 aaKnown RBP12.94□□□□□ -0.34
HOXD3-203ENST00000432796 TDRD7Q8NHU6 1098 aaKnown RBP12.94□□□□□ -0.34
HOXD3-203ENST00000432796 SMCR8Q8TEV9 937 aaPredicted RBP12.94□□□□□ -0.34
HOXD3-203ENST00000432796 ZNF112Q9UJU3 913 aa12.94□□□□□ -0.34
HOXD3-203ENST00000432796 SLC45A1Q9Y2W3 748 aa12.94□□□□□ -0.34
HOXD3-203ENST00000432796 DDX60LQ5H9U9 1706 aaKnown RBP12.93□□□□□ -0.34
HOXD3-203ENST00000432796 SYNGAP1Q96PV0 1343 aa12.93□□□□□ -0.34
HOXD3-203ENST00000432796 H7C1W4 665 aa12.93□□□□□ -0.34
HOXD3-203ENST00000432796 LRRC26Q2I0M4 334 aa12.93□□□□□ -0.34
HOXD3-203ENST00000432796 CWF19L2Q2TBE0 894 aaKnown RBP12.93□□□□□ -0.34
HOXD3-203ENST00000432796 LINS1Q8NG48 757 aa12.93□□□□□ -0.34
HOXD3-203ENST00000432796 TTYH1Q9H313 450 aaPredicted RBP12.93□□□□□ -0.34
HOXD3-203ENST00000432796 A0A0G2JLL6 359 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms