RNA–Protein interactions for RNA: ENST00000431893.3

SEC16A-206, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-206ENST00000431893 CCDC26Q8TAB7 109 aa12.81□□□□□ -0.36
SEC16A-206ENST00000431893 RNF34Q969K3 372 aa12.81□□□□□ -0.36
SEC16A-206ENST00000431893 KRT24Q2M2I5 525 aa12.81□□□□□ -0.36
SEC16A-206ENST00000431893 SDCCAG8Q86SQ7 713 aaPredicted RBP12.81□□□□□ -0.36
SEC16A-206ENST00000431893 LMNTD2Q8IXW0 634 aa12.81□□□□□ -0.36
SEC16A-206ENST00000431893 CASQ2O14958 399 aaPredicted RBP12.8□□□□□ -0.36
SEC16A-206ENST00000431893 CCNT1O60563 726 aaKnown RBP12.8□□□□□ -0.36
SEC16A-206ENST00000431893 BMP15O95972 392 aa12.8□□□□□ -0.36
SEC16A-206ENST00000431893 RAD51AP2Q09MP3 1159 aa12.8□□□□□ -0.36
SEC16A-206ENST00000431893 MRPL50Q8N5N7 158 aaKnown RBP12.8□□□□□ -0.36
SEC16A-206ENST00000431893 MCUR1Q96AQ8 359 aa12.8□□□□□ -0.36
SEC16A-206ENST00000431893 TRIM6Q9C030 488 aaPredicted RBP12.8□□□□□ -0.36
SEC16A-206ENST00000431893 TNFAIP3P21580 790 aa12.8□□□□□ -0.36
SEC16A-206ENST00000431893 PDE4DQ08499 809 aa12.8□□□□□ -0.36
SEC16A-206ENST00000431893 HDAC1Q13547 482 aaPredicted RBP12.8□□□□□ -0.36
SEC16A-206ENST00000431893 ASIC2Q16515 512 aa12.8□□□□□ -0.36
SEC16A-206ENST00000431893 MPHOSPH6Q99547 160 aaKnown RBP12.8□□□□□ -0.36
SEC16A-206ENST00000431893 ZRANB1Q9UGI0 708 aa12.8□□□□□ -0.36
SEC16A-206ENST00000431893 PHF8Q9UPP1 1060 aa12.8□□□□□ -0.36
SEC16A-206ENST00000431893 HECW1Q76N89 1606 aa12.8□□□□□ -0.36
SEC16A-206ENST00000431893 CLUL1Q15846 466 aa12.8□□□□□ -0.36
SEC16A-206ENST00000431893 FAM204AQ9H8W3 233 aa12.8□□□□□ -0.36
SEC16A-206ENST00000431893 NCOA5Q9HCD5 579 aaKnown RBP12.8□□□□□ -0.36
SEC16A-206ENST00000431893 SNRPA1P09661 255 aaKnown RBP12.8□□□□□ -0.36
SEC16A-206ENST00000431893 OTUD7BQ6GQQ9 843 aa12.8□□□□□ -0.36
SEC16A-206ENST00000431893 ANKRD42Q8N9B4 389 aa12.8□□□□□ -0.36
SEC16A-206ENST00000431893 RTL9Q8NET4 1388 aa12.79□□□□□ -0.36
SEC16A-206ENST00000431893 ATP6V1AP38606 617 aa12.79□□□□□ -0.36
SEC16A-206ENST00000431893 IFNL2Q8IZJ0 200 aa12.79□□□□□ -0.36
SEC16A-206ENST00000431893 BACH1O14867 736 aa12.79□□□□□ -0.36
SEC16A-206ENST00000431893 CCDC14Q49A88 953 aa12.79□□□□□ -0.36
SEC16A-206ENST00000431893 PIK3AP1Q6ZUJ8 805 aa12.79□□□□□ -0.36
SEC16A-206ENST00000431893 FRMD4BQ9Y2L6 1034 aa12.79□□□□□ -0.36
SEC16A-206ENST00000431893 CCDC169A6NNP5 214 aa12.79□□□□□ -0.36
SEC16A-206ENST00000431893 RNF113AO15541 343 aaKnown RBP12.79□□□□□ -0.36
SEC16A-206ENST00000431893 ITIH3Q06033 890 aa12.79□□□□□ -0.36
SEC16A-206ENST00000431893 GABPAQ06546 454 aa12.79□□□□□ -0.36
SEC16A-206ENST00000431893 NGLY1Q96IV0 654 aa12.79□□□□□ -0.36
SEC16A-206ENST00000431893 MYL5Q02045 173 aa12.79□□□□□ -0.36
SEC16A-206ENST00000431893 TAF12Q16514 161 aa12.79□□□□□ -0.36
SEC16A-206ENST00000431893 TTC19Q6DKK2 380 aaPredicted RBP12.79□□□□□ -0.36
SEC16A-206ENST00000431893 HS2ST1Q7LGA3 356 aa12.79□□□□□ -0.36
SEC16A-206ENST00000431893 ERO1AQ96HE7 468 aa12.79□□□□□ -0.36
SEC16A-206ENST00000431893 IFT74Q96LB3 600 aa12.79□□□□□ -0.36
SEC16A-206ENST00000431893 TACC3Q9Y6A5 838 aa12.79□□□□□ -0.36
SEC16A-206ENST00000431893 EPB41P11171 864 aaKnown RBP12.79□□□□□ -0.36
SEC16A-206ENST00000431893 CNGA4Q8IV77 575 aa12.79□□□□□ -0.36
SEC16A-206ENST00000431893 TMTC2Q8N394 836 aa12.79□□□□□ -0.36
SEC16A-206ENST00000431893 GSDMBQ8TAX9 411 aa12.79□□□□□ -0.36
SEC16A-206ENST00000431893 TTLL3Q9Y4R7 772 aa12.79□□□□□ -0.36
SEC16A-206ENST00000431893 GRM8O00222 908 aa12.78□□□□□ -0.36
SEC16A-206ENST00000431893 WASLO00401 505 aaPredicted RBP12.78□□□□□ -0.36
SEC16A-206ENST00000431893 GUCY2FP51841 1108 aa12.78□□□□□ -0.36
SEC16A-206ENST00000431893 B4GALNT4Q76KP1 1039 aa12.78□□□□□ -0.36
SEC16A-206ENST00000431893 SMAP1Q8IYB5 467 aaPredicted RBP12.78□□□□□ -0.36
SEC16A-206ENST00000431893 ARFGAP2Q8N6H7 521 aa12.78□□□□□ -0.36
SEC16A-206ENST00000431893 MYO1AQ9UBC5 1043 aa12.78□□□□□ -0.36
SEC16A-206ENST00000431893 TIAM1Q13009 1591 aa12.78□□□□□ -0.36
SEC16A-206ENST00000431893 GADD45BO75293 160 aaPredicted RBP12.78□□□□□ -0.36
SEC16A-206ENST00000431893 MAN1A1P33908 653 aa12.78□□□□□ -0.36
SEC16A-206ENST00000431893 SV2BQ7L1I2 683 aa12.78□□□□□ -0.36
SEC16A-206ENST00000431893 KRT28Q7Z3Y7 464 aa12.78□□□□□ -0.36
SEC16A-206ENST00000431893 AMOTL2Q9Y2J4 779 aa12.78□□□□□ -0.36
SEC16A-206ENST00000431893 FBXO31Q5XUX0 539 aaPredicted RBP12.78□□□□□ -0.36
SEC16A-206ENST00000431893 VSIG1Q86XK7 387 aa12.78□□□□□ -0.36
SEC16A-206ENST00000431893 TAB2Q9NYJ8 693 aa12.78□□□□□ -0.36
SEC16A-206ENST00000431893 CCDC141Q6ZP82 1450 aa12.78□□□□□ -0.36
SEC16A-206ENST00000431893 SYNRGQ9UMZ2 1314 aa12.78□□□□□ -0.36
SEC16A-206ENST00000431893 NCAPD3P42695 1498 aa12.78□□□□□ -0.36
SEC16A-206ENST00000431893 TBC1D8BQ0IIM8 1120 aa12.78□□□□□ -0.36
SEC16A-206ENST00000431893 SH2D4BQ5SQS7 431 aa12.78□□□□□ -0.36
SEC16A-206ENST00000431893 SNX21Q969T3 373 aa12.78□□□□□ -0.36
SEC16A-206ENST00000431893 NUF2Q9BZD4 464 aa12.78□□□□□ -0.36
SEC16A-206ENST00000431893 VCX3BQ9H321 246 aa12.78□□□□□ -0.36
SEC16A-206ENST00000431893 A0A1B0GUA9 196 aa12.78□□□□□ -0.36
SEC16A-206ENST00000431893 POLR2DO15514 142 aaKnown RBP12.78□□□□□ -0.36
SEC16A-206ENST00000431893 CYP26C1Q6V0L0 522 aa12.78□□□□□ -0.36
SEC16A-206ENST00000431893 CLEC11AQ9Y240 323 aa12.78□□□□□ -0.36
SEC16A-206ENST00000431893 ELP1O95163 1332 aa12.77□□□□□ -0.36
SEC16A-206ENST00000431893 B4E1Z4 1266 aa12.77□□□□□ -0.36
SEC16A-206ENST00000431893 DAPK3O43293 454 aa12.77□□□□□ -0.36
SEC16A-206ENST00000431893 CEP104O60308 925 aa12.77□□□□□ -0.36
SEC16A-206ENST00000431893 ATP8B2P98198 1209 aa12.77□□□□□ -0.36
SEC16A-206ENST00000431893 FNBP4Q8N3X1 1017 aaPredicted RBP12.77□□□□□ -0.36
SEC16A-206ENST00000431893 GPR161Q8N6U8 529 aaKnown RBP12.77□□□□□ -0.36
SEC16A-206ENST00000431893 BAIAP2L1Q9UHR4 511 aa12.77□□□□□ -0.36
SEC16A-206ENST00000431893 CASC4Q6P4E1 433 aa12.77□□□□□ -0.36
SEC16A-206ENST00000431893 CBX8Q9HC52 389 aa12.77□□□□□ -0.36
SEC16A-206ENST00000431893 ASIC3Q9UHC3 531 aa12.77□□□□□ -0.36
SEC16A-206ENST00000431893 NIP7Q9Y221 180 aaKnown RBP eCLIP12.77□□□□□ -0.36
SEC16A-206ENST00000431893 GOLGA6BA6NDN3 693 aa12.77□□□□□ -0.37
SEC16A-206ENST00000431893 GAS8O95995 478 aa12.77□□□□□ -0.37
SEC16A-206ENST00000431893 ATP5DP30049 168 aa12.77□□□□□ -0.37
SEC16A-206ENST00000431893 SESN3P58005 492 aa12.77□□□□□ -0.37
SEC16A-206ENST00000431893 HHATQ5VTY9 493 aa12.77□□□□□ -0.37
SEC16A-206ENST00000431893 BLZF1Q9H2G9 400 aa12.77□□□□□ -0.37
SEC16A-206ENST00000431893 FANCCQ00597 558 aa12.77□□□□□ -0.37
SEC16A-206ENST00000431893 MTX1Q13505 466 aa12.77□□□□□ -0.37
SEC16A-206ENST00000431893 DYMQ7RTS9 669 aa12.77□□□□□ -0.37
SEC16A-206ENST00000431893 TRMT44Q8IYL2 757 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms