RNA–Protein interactions for RNA: ENST00000430982.1

PTCD1-204, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-204ENST00000430982 TESPA1A2RU30 521 aaPredicted RBP18.71■□□□□ 0.59
PTCD1-204ENST00000430982 RBM5P52756 815 aaKnown RBP eCLIP18.71■□□□□ 0.59
PTCD1-204ENST00000430982 CRHR2Q13324 411 aa18.71■□□□□ 0.59
PTCD1-204ENST00000430982 GRIK5Q16478 980 aa18.71■□□□□ 0.59
PTCD1-204ENST00000430982 CFAP100Q494V2 611 aa18.71■□□□□ 0.59
PTCD1-204ENST00000430982 COLQQ9Y215 455 aaPredicted RBP18.71■□□□□ 0.59
PTCD1-204ENST00000430982 GJA5P36382 358 aa18.7■□□□□ 0.58
PTCD1-204ENST00000430982 TNNI3KQ59H18 835 aa18.7■□□□□ 0.58
PTCD1-204ENST00000430982 SIRT2Q8IXJ6 389 aa18.7■□□□□ 0.58
PTCD1-204ENST00000430982 WDR66Q8TBY9 1149 aa18.7■□□□□ 0.58
PTCD1-204ENST00000430982 EFCC1Q9HA90 598 aa18.7■□□□□ 0.58
PTCD1-204ENST00000430982 GPR108Q9NPR9 543 aa18.7■□□□□ 0.58
PTCD1-204ENST00000430982 DENND2AQ9ULE3 1009 aa18.7■□□□□ 0.58
PTCD1-204ENST00000430982 PCDHAC2Q9Y5I4 1007 aa18.7■□□□□ 0.58
PTCD1-204ENST00000430982 FPGT-TNNI3KV9GXZ4 949 aa18.7■□□□□ 0.58
PTCD1-204ENST00000430982 OTOFQ9HC10 1997 aa18.7■□□□□ 0.58
PTCD1-204ENST00000430982 CEP290O15078 2479 aa18.69■□□□□ 0.58
PTCD1-204ENST00000430982 SEMA3EO15041 775 aa18.69■□□□□ 0.58
PTCD1-204ENST00000430982 HSP90AB4PQ58FF6 505 aa18.69■□□□□ 0.58
PTCD1-204ENST00000430982 ERC1Q8IUD2 1116 aa18.69■□□□□ 0.58
PTCD1-204ENST00000430982 PTPN18Q99952 460 aa18.69■□□□□ 0.58
PTCD1-204ENST00000430982 TRIOBPQ9H2D6 2365 aa18.69■□□□□ 0.58
PTCD1-204ENST00000430982 APBB1O00213 710 aa18.68■□□□□ 0.58
PTCD1-204ENST00000430982 SP3Q02447 781 aa18.68■□□□□ 0.58
PTCD1-204ENST00000430982 SPDYE2BA6NHP3 402 aa18.67■□□□□ 0.58
PTCD1-204ENST00000430982 PPP1R12BO60237 982 aaPredicted RBP18.67■□□□□ 0.58
PTCD1-204ENST00000430982 SPDYE6P0CI01 402 aa18.67■□□□□ 0.58
PTCD1-204ENST00000430982 CRKP46108 304 aa18.67■□□□□ 0.58
PTCD1-204ENST00000430982 RASGRF1Q13972 1273 aa18.67■□□□□ 0.58
PTCD1-204ENST00000430982 OTUD5Q96G74 571 aa18.67■□□□□ 0.58
PTCD1-204ENST00000430982 CRBNQ96SW2 442 aa18.67■□□□□ 0.58
PTCD1-204ENST00000430982 DBNDD2Q9BQY9 259 aa18.67■□□□□ 0.58
PTCD1-204ENST00000430982 SERPINA10Q9UK55 444 aa18.67■□□□□ 0.58
PTCD1-204ENST00000430982 RANBP2P49792 3224 aaKnown RBP18.67■□□□□ 0.58
PTCD1-204ENST00000430982 CLRN2A0PK11 232 aa18.66■□□□□ 0.58
PTCD1-204ENST00000430982 MYO1BO43795 1136 aa18.66■□□□□ 0.58
PTCD1-204ENST00000430982 OTUD7BQ6GQQ9 843 aa18.66■□□□□ 0.58
PTCD1-204ENST00000430982 PRMT6Q96LA8 375 aaPredicted RBP18.66■□□□□ 0.58
PTCD1-204ENST00000430982 CCDC8Q9H0W5 538 aaPredicted RBP18.66■□□□□ 0.58
PTCD1-204ENST00000430982 SUGT1Q9Y2Z0 365 aa18.66■□□□□ 0.58
PTCD1-204ENST00000430982 ARAP2Q8WZ64 1704 aa18.66■□□□□ 0.58
PTCD1-204ENST00000430982 USP2O75604 605 aaPredicted RBP18.65■□□□□ 0.58
PTCD1-204ENST00000430982 SUPT20HL1Q3ZLR7 823 aa18.65■□□□□ 0.58
PTCD1-204ENST00000430982 CCDC158Q5M9N0 1113 aa18.65■□□□□ 0.58
PTCD1-204ENST00000430982 TTC39AQ5SRH9 613 aa18.65■□□□□ 0.58
PTCD1-204ENST00000430982 RHPN1Q8TCX5 695 aa18.65■□□□□ 0.58
PTCD1-204ENST00000430982 BCL11AQ9H165 835 aa18.65■□□□□ 0.58
PTCD1-204ENST00000430982 VEZTQ9HBM0 779 aa18.65■□□□□ 0.58
PTCD1-204ENST00000430982 IL1RAPL2Q9NP60 686 aa18.65■□□□□ 0.58
PTCD1-204ENST00000430982 MAST3O60307 1309 aa18.65■□□□□ 0.58
PTCD1-204ENST00000430982 LDHBP07195 334 aaKnown RBP18.64■□□□□ 0.57
PTCD1-204ENST00000430982 UQCRFS1P1P0C7P4 283 aa18.64■□□□□ 0.57
PTCD1-204ENST00000430982 HDLBPQ00341 1268 aaKnown RBP18.64■□□□□ 0.57
PTCD1-204ENST00000430982 AACSQ86V21 672 aa18.64■□□□□ 0.57
PTCD1-204ENST00000430982 ANKRD13AQ8IZ07 590 aa18.64■□□□□ 0.57
PTCD1-204ENST00000430982 ZGPATQ8N5A5 531 aaKnown RBP18.64■□□□□ 0.57
PTCD1-204ENST00000430982 TEKT1Q969V4 418 aa18.64■□□□□ 0.57
PTCD1-204ENST00000430982 EAF2Q96CJ1 260 aaPredicted RBP18.64■□□□□ 0.57
PTCD1-204ENST00000430982 KIF1BPQ96EK5 621 aa18.64■□□□□ 0.57
PTCD1-204ENST00000430982 MS4A4AQ96JQ5 239 aa18.64■□□□□ 0.57
PTCD1-204ENST00000430982 AOX1Q06278 1338 aa18.64■□□□□ 0.57
PTCD1-204ENST00000430982 ZBTB22O15209 634 aa18.63■□□□□ 0.57
PTCD1-204ENST00000430982 RAB11FIP3O75154 756 aa18.63■□□□□ 0.57
PTCD1-204ENST00000430982 ARID4AP29374 1257 aaPredicted RBP18.63■□□□□ 0.57
PTCD1-204ENST00000430982 PRDX5P30044 214 aa18.63■□□□□ 0.57
PTCD1-204ENST00000430982 IREB2P48200 963 aaKnown RBP18.63■□□□□ 0.57
PTCD1-204ENST00000430982 NBPF12Q5TAG4 269 aaPredicted RBP18.63■□□□□ 0.57
PTCD1-204ENST00000430982 SPATA5Q8NB90 893 aa18.63■□□□□ 0.57
PTCD1-204ENST00000430982 TMEM106CQ9BVX2 250 aa18.63■□□□□ 0.57
PTCD1-204ENST00000430982 TDRD3Q9H7E2 651 aaKnown RBP18.63■□□□□ 0.57
PTCD1-204ENST00000430982 TLR7Q9NYK1 1049 aaKnown RBP18.63■□□□□ 0.57
PTCD1-204ENST00000430982 HMG20BQ9P0W2 317 aa18.63■□□□□ 0.57
PTCD1-204ENST00000430982 ABCF2Q9UG63 623 aa18.63■□□□□ 0.57
PTCD1-204ENST00000430982 DBNLQ9UJU6 430 aaKnown RBP18.63■□□□□ 0.57
PTCD1-204ENST00000430982 PTCH2Q9Y6C5 1203 aa18.63■□□□□ 0.57
PTCD1-204ENST00000430982 SALL1Q9NSC2 1324 aa18.63■□□□□ 0.57
PTCD1-204ENST00000430982 PI16Q6UXB8 463 aa18.62■□□□□ 0.57
PTCD1-204ENST00000430982 ZNF70Q9UC06 446 aaPredicted RBP18.62■□□□□ 0.57
PTCD1-204ENST00000430982 PDS5AQ29RF7 1337 aaKnown RBP18.62■□□□□ 0.57
PTCD1-204ENST00000430982 H0YGN5 161 aa18.61■□□□□ 0.57
PTCD1-204ENST00000430982 MCAMP43121 646 aa18.61■□□□□ 0.57
PTCD1-204ENST00000430982 DIXDC1Q155Q3 683 aa18.61■□□□□ 0.57
PTCD1-204ENST00000430982 SLC9C1Q4G0N8 1177 aa18.61■□□□□ 0.57
PTCD1-204ENST00000430982 SPTY2D1Q68D10 685 aaPredicted RBP18.61■□□□□ 0.57
PTCD1-204ENST00000430982 CLASRPQ8N2M8 674 aaKnown RBP18.61■□□□□ 0.57
PTCD1-204ENST00000430982 MRIQ9BWK5 157 aa18.61■□□□□ 0.57
PTCD1-204ENST00000430982 SNRKQ9NRH2 765 aa18.61■□□□□ 0.57
PTCD1-204ENST00000430982 SUPT16HQ9Y5B9 1047 aaKnown RBP18.61■□□□□ 0.57
PTCD1-204ENST00000430982 PCDHB15Q9Y5E8 787 aa18.61■□□□□ 0.57
PTCD1-204ENST00000430982 SPDYE2Q495Y8 402 aa18.6■□□□□ 0.57
PTCD1-204ENST00000430982 HHIPL2Q6UWX4 724 aa18.6■□□□□ 0.57
PTCD1-204ENST00000430982 NBPF11Q86T75 865 aa18.6■□□□□ 0.57
PTCD1-204ENST00000430982 DZIP1Q86YF9 867 aaKnown RBP18.6■□□□□ 0.57
PTCD1-204ENST00000430982 BRI3BPQ8WY22 251 aa18.6■□□□□ 0.57
PTCD1-204ENST00000430982 OPTNQ96CV9 577 aa18.6■□□□□ 0.57
PTCD1-204ENST00000430982 ZDHHC15Q96MV8 337 aa18.6■□□□□ 0.57
PTCD1-204ENST00000430982 MYH13Q9UKX3 1938 aa18.59■□□□□ 0.57
PTCD1-204ENST00000430982 ZSWIM8A7E2V4 1837 aa18.59■□□□□ 0.57
PTCD1-204ENST00000430982 IFIT2P09913 472 aaKnown RBP18.59■□□□□ 0.57
PTCD1-204ENST00000430982 RASA3Q14644 834 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms