RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 F13BP05160 661 aa9.01□□□□□ -0.97
HMGB3P5-201ENST00000428894 GSTP1P09211 210 aaKnown RBP9.01□□□□□ -0.97
HMGB3P5-201ENST00000428894 ALG1LQ6GMV1 187 aa9.01□□□□□ -0.97
HMGB3P5-201ENST00000428894 INTS5Q6P9B9 1019 aaKnown RBP9.01□□□□□ -0.97
HMGB3P5-201ENST00000428894 FAM105AQ9NUU6 356 aa9.01□□□□□ -0.97
HMGB3P5-201ENST00000428894 PPP1R9AQ9ULJ8 1098 aa9.01□□□□□ -0.97
HMGB3P5-201ENST00000428894 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9□□□□□ -0.97
HMGB3P5-201ENST00000428894 NFICP08651 508 aa9□□□□□ -0.97
HMGB3P5-201ENST00000428894 ATP2B2Q01814 1243 aa9□□□□□ -0.97
HMGB3P5-201ENST00000428894 AEBP1Q8IUX7 1158 aa9□□□□□ -0.97
HMGB3P5-201ENST00000428894 SHISA5Q8N114 240 aa9□□□□□ -0.97
HMGB3P5-201ENST00000428894 WDR89Q96FK6 387 aaPredicted RBP9□□□□□ -0.97
HMGB3P5-201ENST00000428894 PRKAG2Q9UGJ0 569 aa9□□□□□ -0.97
HMGB3P5-201ENST00000428894 SYNGAP1Q96PV0 1343 aa9□□□□□ -0.97
HMGB3P5-201ENST00000428894 MAP7Q14244 749 aa8.99□□□□□ -0.97
HMGB3P5-201ENST00000428894 C3orf58Q8NDZ4 430 aa8.99□□□□□ -0.97
HMGB3P5-201ENST00000428894 KCNB2Q92953 911 aa8.99□□□□□ -0.97
HMGB3P5-201ENST00000428894 TBC1D32Q96NH3 1257 aa8.99□□□□□ -0.97
HMGB3P5-201ENST00000428894 OSBPL1AQ9BXW6 950 aa8.99□□□□□ -0.97
HMGB3P5-201ENST00000428894 OSBPL7Q9BZF2 842 aa8.99□□□□□ -0.97
HMGB3P5-201ENST00000428894 GSX1Q9H4S2 264 aaPredicted RBP8.99□□□□□ -0.97
HMGB3P5-201ENST00000428894 ACSS3Q9H6R3 686 aa8.99□□□□□ -0.97
HMGB3P5-201ENST00000428894 KIAA1324LA8MWY0 1029 aaPredicted RBP8.98□□□□□ -0.97
HMGB3P5-201ENST00000428894 TMPRSS2O15393 492 aa8.98□□□□□ -0.97
HMGB3P5-201ENST00000428894 ZNF862O60290 1169 aa8.98□□□□□ -0.97
HMGB3P5-201ENST00000428894 SLFN14P0C7P3 912 aa8.98□□□□□ -0.97
HMGB3P5-201ENST00000428894 PDIA4P13667 645 aaKnown RBP8.98□□□□□ -0.97
HMGB3P5-201ENST00000428894 GSTT1P30711 240 aa8.98□□□□□ -0.97
HMGB3P5-201ENST00000428894 ADMP35318 185 aa8.98□□□□□ -0.97
HMGB3P5-201ENST00000428894 SULF2Q8IWU5 870 aa8.98□□□□□ -0.97
HMGB3P5-201ENST00000428894 STK35Q8TDR2 534 aa8.98□□□□□ -0.97
HMGB3P5-201ENST00000428894 SEMA6CQ9H3T2 930 aa8.98□□□□□ -0.97
HMGB3P5-201ENST00000428894 KRT82Q9NSB4 513 aa8.98□□□□□ -0.97
HMGB3P5-201ENST00000428894 PIM2Q9P1W9 311 aa8.98□□□□□ -0.97
HMGB3P5-201ENST00000428894 LEMD3Q9Y2U8 911 aa8.98□□□□□ -0.97
HMGB3P5-201ENST00000428894 GIPC1O14908 333 aa8.97□□□□□ -0.97
HMGB3P5-201ENST00000428894 P4HBP07237 508 aaKnown RBP8.97□□□□□ -0.97
HMGB3P5-201ENST00000428894 ARNTP27540 789 aa8.97□□□□□ -0.97
HMGB3P5-201ENST00000428894 PDZD3Q86UT5 571 aa8.97□□□□□ -0.97
HMGB3P5-201ENST00000428894 SRCIN1Q9C0H9 1055 aa8.97□□□□□ -0.97
HMGB3P5-201ENST00000428894 NME2P22392 152 aa8.96□□□□□ -0.98
HMGB3P5-201ENST00000428894 HOXA10P31260 410 aaPredicted RBP8.96□□□□□ -0.98
HMGB3P5-201ENST00000428894 HNRNPUQ00839 825 aaKnown RBP eCLIP8.96□□□□□ -0.98
HMGB3P5-201ENST00000428894 ID3Q02535 119 aa8.96□□□□□ -0.98
HMGB3P5-201ENST00000428894 KIF4BQ2VIQ3 1234 aa8.96□□□□□ -0.98
HMGB3P5-201ENST00000428894 TPTE2Q6XPS3 522 aa8.96□□□□□ -0.98
HMGB3P5-201ENST00000428894 ZAR1Q86SH2 424 aa8.96□□□□□ -0.98
HMGB3P5-201ENST00000428894 NECAB3Q96P71 396 aaPredicted RBP8.96□□□□□ -0.98
HMGB3P5-201ENST00000428894 LGR6Q9HBX8 967 aa8.96□□□□□ -0.98
HMGB3P5-201ENST00000428894 CRIM1Q9NZV1 1036 aa8.96□□□□□ -0.98
HMGB3P5-201ENST00000428894 SPG7Q9UQ90 795 aa8.96□□□□□ -0.98
HMGB3P5-201ENST00000428894 DAGLAQ9Y4D2 1042 aa8.96□□□□□ -0.98
HMGB3P5-201ENST00000428894 LDHBP07195 334 aaKnown RBP8.95□□□□□ -0.98
HMGB3P5-201ENST00000428894 GATA6Q92908 595 aa8.95□□□□□ -0.98
HMGB3P5-201ENST00000428894 METTL22Q9BUU2 404 aaPredicted RBP8.95□□□□□ -0.98
HMGB3P5-201ENST00000428894 EMILIN2Q9BXX0 1053 aa8.95□□□□□ -0.98
HMGB3P5-201ENST00000428894 FAM170BA6NMN3 283 aa8.94□□□□□ -0.98
HMGB3P5-201ENST00000428894 DYNC1LI2O43237 492 aaPredicted RBP8.94□□□□□ -0.98
HMGB3P5-201ENST00000428894 SPINK2P20155 84 aa8.94□□□□□ -0.98
HMGB3P5-201ENST00000428894 DTX1Q86Y01 620 aa8.94□□□□□ -0.98
HMGB3P5-201ENST00000428894 FANCD2OSQ96PS1 177 aa8.94□□□□□ -0.98
HMGB3P5-201ENST00000428894 CEP44Q9C0F1 390 aa8.94□□□□□ -0.98
HMGB3P5-201ENST00000428894 ATXN3LQ9H3M9 355 aa8.94□□□□□ -0.98
HMGB3P5-201ENST00000428894 PIDD1Q9HB75 910 aa8.94□□□□□ -0.98
HMGB3P5-201ENST00000428894 CBX8Q9HC52 389 aa8.94□□□□□ -0.98
HMGB3P5-201ENST00000428894 FBXO24O75426 580 aa8.93□□□□□ -0.98
HMGB3P5-201ENST00000428894 FOSL1P15407 271 aa8.93□□□□□ -0.98
HMGB3P5-201ENST00000428894 CPSF6Q16630 551 aaKnown RBP eCLIP8.93□□□□□ -0.98
HMGB3P5-201ENST00000428894 MAP1SQ66K74 1059 aaPredicted RBP8.93□□□□□ -0.98
HMGB3P5-201ENST00000428894 SEZ6L2Q6UXD5 910 aa8.93□□□□□ -0.98
HMGB3P5-201ENST00000428894 SND1Q7KZF4 910 aaKnown RBP eCLIP8.93□□□□□ -0.98
HMGB3P5-201ENST00000428894 C12orf49Q9H741 205 aa8.93□□□□□ -0.98
HMGB3P5-201ENST00000428894 DISC1Q9NRI5 854 aa8.93□□□□□ -0.98
HMGB3P5-201ENST00000428894 PPM1HQ9ULR3 514 aa8.93□□□□□ -0.98
HMGB3P5-201ENST00000428894 PCDHGC5Q9Y5F6 944 aa8.93□□□□□ -0.98
HMGB3P5-201ENST00000428894 ENC1O14682 589 aa8.92□□□□□ -0.98
HMGB3P5-201ENST00000428894 CYP26A1O43174 497 aa8.92□□□□□ -0.98
HMGB3P5-201ENST00000428894 DUSP27Q5VZP5 1158 aa8.92□□□□□ -0.98
HMGB3P5-201ENST00000428894 C1GALT1Q9NS00 363 aa8.92□□□□□ -0.98
HMGB3P5-201ENST00000428894 SAMM50Q9Y512 469 aa8.92□□□□□ -0.98
HMGB3P5-201ENST00000428894 RNGTTO60942 597 aaKnown RBP8.91□□□□□ -0.98
HMGB3P5-201ENST00000428894 ADAMTS4O75173 837 aa8.91□□□□□ -0.98
HMGB3P5-201ENST00000428894 PAGE1O75459 146 aa8.91□□□□□ -0.98
HMGB3P5-201ENST00000428894 BMP6P22004 513 aa8.91□□□□□ -0.98
HMGB3P5-201ENST00000428894 GRIN3AQ8TCU5 1115 aa8.91□□□□□ -0.98
HMGB3P5-201ENST00000428894 GPBAR1Q8TDU6 330 aa8.91□□□□□ -0.98
HMGB3P5-201ENST00000428894 FAM8A1Q9UBU6 413 aa8.91□□□□□ -0.98
HMGB3P5-201ENST00000428894 ANKRD33BA6NCL7 494 aa8.9□□□□□ -0.98
HMGB3P5-201ENST00000428894 USP17L7P0C7H9 530 aa8.9□□□□□ -0.98
HMGB3P5-201ENST00000428894 CYP27A1Q02318 531 aa8.9□□□□□ -0.98
HMGB3P5-201ENST00000428894 ZNF252P-AS1Q0IIN9 211 aa8.9□□□□□ -0.98
HMGB3P5-201ENST00000428894 TTLL4Q14679 1199 aa8.9□□□□□ -0.98
HMGB3P5-201ENST00000428894 MPRIPQ6WCQ1 1025 aa8.9□□□□□ -0.98
HMGB3P5-201ENST00000428894 SMYD4Q8IYR2 804 aaPredicted RBP8.9□□□□□ -0.98
HMGB3P5-201ENST00000428894 ACSBG1Q96GR2 724 aa8.9□□□□□ -0.98
HMGB3P5-201ENST00000428894 FRMD6Q96NE9 622 aa8.9□□□□□ -0.98
HMGB3P5-201ENST00000428894 WNT11O96014 354 aa8.89□□□□□ -0.99
HMGB3P5-201ENST00000428894 HCLS1P14317 486 aaPredicted RBP8.89□□□□□ -0.99
HMGB3P5-201ENST00000428894 GP2P55259 537 aaKnown RBP8.89□□□□□ -0.99
HMGB3P5-201ENST00000428894 ZC3H12AQ5D1E8 599 aaKnown RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms