RNA–Protein interactions for RNA: ENST00000428104.2

PDE6D-203, Transcript of phosphodiesterase 6D, humanhuman

TSL 3

Gene PDE6D, Length 627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-203ENST00000428104 KCNH4Q9UQ05 1017 aa18.42■□□□□ 0.54
PDE6D-203ENST00000428104 ANKRD18BA2A2Z9 1011 aa18.41■□□□□ 0.54
PDE6D-203ENST00000428104 PLIN1O60240 522 aa18.41■□□□□ 0.54
PDE6D-203ENST00000428104 ZNF853P0CG23 659 aa18.41■□□□□ 0.54
PDE6D-203ENST00000428104 CAPN2P17655 700 aa18.41■□□□□ 0.54
PDE6D-203ENST00000428104 CASP7P55210 303 aa18.41■□□□□ 0.54
PDE6D-203ENST00000428104 MIGA2Q7L4E1 593 aa18.41■□□□□ 0.54
PDE6D-203ENST00000428104 PXYLP1Q8TE99 480 aa18.41■□□□□ 0.54
PDE6D-203ENST00000428104 FAM161BQ96MY7 647 aa18.41■□□□□ 0.54
PDE6D-203ENST00000428104 TAOK2Q9UL54 1235 aa18.41■□□□□ 0.54
PDE6D-203ENST00000428104 TTC28Q96AY4 2481 aa18.4■□□□□ 0.54
PDE6D-203ENST00000428104 CCDC30Q5VVM6 783 aa18.4■□□□□ 0.54
PDE6D-203ENST00000428104 GPAT2Q6NUI2 795 aa18.4■□□□□ 0.54
PDE6D-203ENST00000428104 TDRD7Q8NHU6 1098 aaKnown RBP18.4■□□□□ 0.54
PDE6D-203ENST00000428104 RUNDC1Q96C34 613 aa18.4■□□□□ 0.54
PDE6D-203ENST00000428104 GCKRQ14397 625 aa18.39■□□□□ 0.53
PDE6D-203ENST00000428104 DCAF15Q66K64 600 aa18.39■□□□□ 0.53
PDE6D-203ENST00000428104 ZNF341Q9BYN7 854 aa18.39■□□□□ 0.53
PDE6D-203ENST00000428104 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.39■□□□□ 0.533e-6■■□□□ 14.4
PDE6D-203ENST00000428104 POTEB2H3BUK9 544 aa18.38■□□□□ 0.53
PDE6D-203ENST00000428104 TNPO2O14787 897 aaKnown RBP18.38■□□□□ 0.53
PDE6D-203ENST00000428104 GYG1P46976 350 aa18.38■□□□□ 0.53
PDE6D-203ENST00000428104 IRF5Q13568 498 aa18.38■□□□□ 0.53
PDE6D-203ENST00000428104 HOOK2Q96ED9 719 aa18.38■□□□□ 0.53
PDE6D-203ENST00000428104 IFIT5Q13325 482 aaKnown RBP18.37■□□□□ 0.53
PDE6D-203ENST00000428104 FAM83AQ86UY5 434 aa18.37■□□□□ 0.53
PDE6D-203ENST00000428104 ANKLE1Q8NAG6 615 aa18.37■□□□□ 0.53
PDE6D-203ENST00000428104 NBPF3Q9H094 633 aa18.37■□□□□ 0.53
PDE6D-203ENST00000428104 TMOD2Q9NZR1 351 aa18.37■□□□□ 0.53
PDE6D-203ENST00000428104 HIBADHP31937 336 aaKnown RBP18.36■□□□□ 0.53
PDE6D-203ENST00000428104 FAM109BQ6ICB4 259 aaPredicted RBP18.36■□□□□ 0.53
PDE6D-203ENST00000428104 IFT57Q9NWB7 429 aa18.36■□□□□ 0.53
PDE6D-203ENST00000428104 CHMP3Q9Y3E7 222 aa18.36■□□□□ 0.53
PDE6D-203ENST00000428104 COL9A1P20849 921 aa18.35■□□□□ 0.53
PDE6D-203ENST00000428104 G2E3Q7L622 706 aa18.35■□□□□ 0.53
PDE6D-203ENST00000428104 TSPYL6Q8N831 410 aa18.35■□□□□ 0.53
PDE6D-203ENST00000428104 TEKT1Q969V4 418 aa18.35■□□□□ 0.53
PDE6D-203ENST00000428104 ZNF594Q96JF6 807 aaPredicted RBP18.35■□□□□ 0.53
PDE6D-203ENST00000428104 FAM84BQ96KN1 310 aaPredicted RBP18.35■□□□□ 0.53
PDE6D-203ENST00000428104 C11orf49Q9H6J7 331 aa18.35■□□□□ 0.53
PDE6D-203ENST00000428104 IQSEC3Q9UPP2 1182 aaPredicted RBP18.35■□□□□ 0.53
PDE6D-203ENST00000428104 A0A1B0GUL6 1792 aa18.35■□□□□ 0.53
PDE6D-203ENST00000428104 GNAI1P63096 354 aa18.34■□□□□ 0.53
PDE6D-203ENST00000428104 HDLBPQ00341 1268 aaKnown RBP18.34■□□□□ 0.53
PDE6D-203ENST00000428104 CHAF1AQ13111 956 aaPredicted RBP18.34■□□□□ 0.53
PDE6D-203ENST00000428104 FKBP1CQ5VVH2 108 aa18.34■□□□□ 0.53
PDE6D-203ENST00000428104 ZNF112Q9UJU3 913 aa18.34■□□□□ 0.53
PDE6D-203ENST00000428104 CDH23Q9H251 3354 aa18.33■□□□□ 0.53
PDE6D-203ENST00000428104 RPAP1Q9BWH6 1393 aaPredicted RBP18.33■□□□□ 0.53
PDE6D-203ENST00000428104 FOXO4P98177 505 aa18.33■□□□□ 0.52
PDE6D-203ENST00000428104 MDM2Q00987 491 aaPredicted RBP18.33■□□□□ 0.52
PDE6D-203ENST00000428104 APOBEC3HQ6NTF7 200 aaKnown RBP18.33■□□□□ 0.52
PDE6D-203ENST00000428104 LDHAL6AQ6ZMR3 332 aa18.33■□□□□ 0.52
PDE6D-203ENST00000428104 CNNM1Q9NRU3 951 aa18.33■□□□□ 0.52
PDE6D-203ENST00000428104 RAPGEFL1Q9UHV5 662 aa18.33■□□□□ 0.52
PDE6D-203ENST00000428104 CXCL11O14625 94 aa18.32■□□□□ 0.52
PDE6D-203ENST00000428104 TRIM32Q13049 653 aa18.32■□□□□ 0.52
PDE6D-203ENST00000428104 ZDHHC15Q96MV8 337 aa18.32■□□□□ 0.52
PDE6D-203ENST00000428104 MYH16Q9H6N6 1097 aa18.32■□□□□ 0.52
PDE6D-203ENST00000428104 MGAMO43451 1857 aa18.32■□□□□ 0.52
PDE6D-203ENST00000428104 PFASO15067 1338 aa18.31■□□□□ 0.52
PDE6D-203ENST00000428104 NOL9Q5SY16 702 aaKnown RBP18.31■□□□□ 0.52
PDE6D-203ENST00000428104 MAFAQ8NHW3 353 aaPredicted RBP18.31■□□□□ 0.52
PDE6D-203ENST00000428104 COA7Q96BR5 231 aa18.31■□□□□ 0.52
PDE6D-203ENST00000428104 STK31Q9BXU1 1019 aa18.31■□□□□ 0.52
PDE6D-203ENST00000428104 CHMP4AQ9BY43 222 aa18.31■□□□□ 0.52
PDE6D-203ENST00000428104 DNAH12Q6ZR08 3092 aa18.31■□□□□ 0.52
PDE6D-203ENST00000428104 A0A0G2JLL6 359 aaPredicted RBP18.3■□□□□ 0.52
PDE6D-203ENST00000428104 HMGCRP04035 888 aa18.3■□□□□ 0.52
PDE6D-203ENST00000428104 UBE4AQ14139 1066 aa18.3■□□□□ 0.52
PDE6D-203ENST00000428104 TAF7LQ5H9L4 462 aa18.3■□□□□ 0.52
PDE6D-203ENST00000428104 GADL1Q6ZQY3 521 aa18.3■□□□□ 0.52
PDE6D-203ENST00000428104 PRRT2Q7Z6L0 340 aaPredicted RBP18.3■□□□□ 0.52
PDE6D-203ENST00000428104 SMCR8Q8TEV9 937 aaPredicted RBP18.3■□□□□ 0.52
PDE6D-203ENST00000428104 CDX2Q99626 313 aaPredicted RBP18.3■□□□□ 0.52
PDE6D-203ENST00000428104 COL2A1P02458 1487 aaPredicted RBP18.29■□□□□ 0.52
PDE6D-203ENST00000428104 TCP10Q12799 353 aa18.29■□□□□ 0.52
PDE6D-203ENST00000428104 LMBR1LQ6UX01 489 aa18.29■□□□□ 0.52
PDE6D-203ENST00000428104 FASTKD5Q7L8L6 764 aaKnown RBP18.29■□□□□ 0.52
PDE6D-203ENST00000428104 HMX1Q9NP08 348 aaPredicted RBP18.29■□□□□ 0.52
PDE6D-203ENST00000428104 ADAMTS8Q9UP79 889 aa18.29■□□□□ 0.52
PDE6D-203ENST00000428104 ZHX2Q9Y6X8 837 aa18.29■□□□□ 0.52
PDE6D-203ENST00000428104 WDR43Q15061 677 aaKnown RBP eCLIP18.28■□□□□ 0.52
PDE6D-203ENST00000428104 CCDC57Q2TAC2 916 aa18.28■□□□□ 0.52
PDE6D-203ENST00000428104 EPHA10Q5JZY3 1008 aa18.28■□□□□ 0.52
PDE6D-203ENST00000428104 ZNF697Q5TEC3 545 aa18.28■□□□□ 0.52
PDE6D-203ENST00000428104 ANKRD13CQ8N6S4 541 aa18.28■□□□□ 0.52
PDE6D-203ENST00000428104 LINS1Q8NG48 757 aa18.28■□□□□ 0.52
PDE6D-203ENST00000428104 TBC1D22AQ8WUA7 517 aa18.28■□□□□ 0.52
PDE6D-203ENST00000428104 FAM151AQ8WW52 585 aa18.28■□□□□ 0.52
PDE6D-203ENST00000428104 OGDHLQ9ULD0 1010 aa18.28■□□□□ 0.52
PDE6D-203ENST00000428104 DDX60LQ5H9U9 1706 aaKnown RBP18.28■□□□□ 0.52
PDE6D-203ENST00000428104 FBXO33Q7Z6M2 555 aa18.27■□□□□ 0.52
PDE6D-203ENST00000428104 VPS37DQ86XT2 251 aa18.27■□□□□ 0.52
PDE6D-203ENST00000428104 DNAAF4Q8WXU2 420 aa18.27■□□□□ 0.52
PDE6D-203ENST00000428104 FRAT2O75474 233 aaPredicted RBP18.26■□□□□ 0.51
PDE6D-203ENST00000428104 SLC4A2P04920 1241 aa18.26■□□□□ 0.51
PDE6D-203ENST00000428104 CALD1Q05682 793 aaKnown RBP18.26■□□□□ 0.51
PDE6D-203ENST00000428104 LRRC26Q2I0M4 334 aa18.26■□□□□ 0.51
PDE6D-203ENST00000428104 MRIQ9BWK5 157 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms