RNA–Protein interactions for RNA: ENST00000428101.6

LMO1-202, Transcript of LIM domain only 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LMO1, Length 1,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-202ENST00000428101 PTPN18Q99952 460 aa33.75■■■□□ 2.99
LMO1-202ENST00000428101 AKAP2Q9Y2D5 859 aa33.75■■■□□ 2.99
LMO1-202ENST00000428101 RASGRF1Q13972 1273 aa33.74■■■□□ 2.99
LMO1-202ENST00000428101 MS4A4AQ96JQ5 239 aa33.74■■■□□ 2.99
LMO1-202ENST00000428101 RPAP1Q9BWH6 1393 aaPredicted RBP33.73■■■□□ 2.99
LMO1-202ENST00000428101 MYH2Q9UKX2 1941 aa33.73■■■□□ 2.99
LMO1-202ENST00000428101 FKTNO75072 461 aa33.73■■■□□ 2.99
LMO1-202ENST00000428101 CSADQ9Y600 493 aa33.72■■■□□ 2.99
LMO1-202ENST00000428101 PKN2Q16513 984 aaKnown RBP33.71■■■□□ 2.99
LMO1-202ENST00000428101 FAM151AQ8WW52 585 aa33.71■■■□□ 2.99
LMO1-202ENST00000428101 PDS5AQ29RF7 1337 aaKnown RBP33.71■■■□□ 2.99
LMO1-202ENST00000428101 NFIAQ12857 509 aa33.7■■■□□ 2.99
LMO1-202ENST00000428101 ZGPATQ8N5A5 531 aaKnown RBP33.7■■■□□ 2.99
LMO1-202ENST00000428101 HOOK2Q96ED9 719 aa33.7■■■□□ 2.99
LMO1-202ENST00000428101 AK9Q5TCS8 1911 aa33.69■■■□□ 2.98
LMO1-202ENST00000428101 TCP10Q12799 353 aa33.69■■■□□ 2.98
LMO1-202ENST00000428101 MVPQ14764 893 aaKnown RBP33.69■■■□□ 2.98
LMO1-202ENST00000428101 OTUD7BQ6GQQ9 843 aa33.69■■■□□ 2.98
LMO1-202ENST00000428101 WRNIP1Q96S55 665 aa33.69■■■□□ 2.98
LMO1-202ENST00000428101 USP40Q9NVE5 1235 aa33.69■■■□□ 2.98
LMO1-202ENST00000428101 SNCAIPQ9Y6H5 919 aa33.69■■■□□ 2.98
LMO1-202ENST00000428101 MIGA2Q7L4E1 593 aa33.68■■■□□ 2.98
LMO1-202ENST00000428101 ZKSCAN4Q969J2 545 aaPredicted RBP33.68■■■□□ 2.98
LMO1-202ENST00000428101 NEUROD6Q96NK8 337 aa33.68■■■□□ 2.98
LMO1-202ENST00000428101 FAM198AQ9UFP1 575 aa33.68■■■□□ 2.98
LMO1-202ENST00000428101 HPS5Q9UPZ3 1129 aa33.68■■■□□ 2.98
LMO1-202ENST00000428101 G3BP1Q13283 466 aaKnown RBP eCLIP33.67■■■□□ 2.98
LMO1-202ENST00000428101 CRHR2Q13324 411 aa33.67■■■□□ 2.98
LMO1-202ENST00000428101 DCAF15Q66K64 600 aa33.67■■■□□ 2.98
LMO1-202ENST00000428101 BRI3BPQ8WY22 251 aa33.67■■■□□ 2.98
LMO1-202ENST00000428101 OTUD5Q96G74 571 aa33.67■■■□□ 2.98
LMO1-202ENST00000428101 ZBED9Q6R2W3 1325 aa33.67■■■□□ 2.98
LMO1-202ENST00000428101 SPDYE5A6NIY4 337 aa33.66■■■□□ 2.98
LMO1-202ENST00000428101 GAKO14976 1311 aa33.66■■■□□ 2.98
LMO1-202ENST00000428101 RLBP1P12271 317 aa33.66■■■□□ 2.98
LMO1-202ENST00000428101 POLA2Q14181 598 aa33.66■■■□□ 2.98
LMO1-202ENST00000428101 ABCF2Q9UG63 623 aa33.66■■■□□ 2.98
LMO1-202ENST00000428101 GTF2A2P52657 109 aa33.65■■■□□ 2.98
LMO1-202ENST00000428101 MLLT1Q03111 559 aaPredicted RBP33.65■■■□□ 2.98
LMO1-202ENST00000428101 ZNF341Q9BYN7 854 aa33.65■■■□□ 2.98
LMO1-202ENST00000428101 ERO1BQ86YB8 467 aa33.64■■■□□ 2.98
LMO1-202ENST00000428101 ZFPM1Q8IX07 1006 aa33.64■■■□□ 2.98
LMO1-202ENST00000428101 FTSJ3Q8IY81 847 aaKnown RBP33.64■■■□□ 2.98
LMO1-202ENST00000428101 CCL15-CCL14A0A0B4J2E2 113 aa33.63■■■□□ 2.97
LMO1-202ENST00000428101 ATP8B2P98198 1209 aa33.63■■■□□ 2.97
LMO1-202ENST00000428101 CCL15Q16663 113 aa33.63■■■□□ 2.97
LMO1-202ENST00000428101 DZIP1Q86YF9 867 aaKnown RBP33.63■■■□□ 2.97
LMO1-202ENST00000428101 SSH3Q8TE77 659 aa33.63■■■□□ 2.97
LMO1-202ENST00000428101 FAM163AQ96GL9 167 aaPredicted RBP33.63■■■□□ 2.97
LMO1-202ENST00000428101 C1orf115Q9H7X2 142 aa33.63■■■□□ 2.97
LMO1-202ENST00000428101 HMG20BQ9P0W2 317 aa33.63■■■□□ 2.97
LMO1-202ENST00000428101 SPTY2D1Q68D10 685 aaPredicted RBP33.62■■■□□ 2.97
LMO1-202ENST00000428101 FBXO46Q6PJ61 603 aaPredicted RBP33.62■■■□□ 2.97
LMO1-202ENST00000428101 ZNF112Q9UJU3 913 aa33.62■■■□□ 2.97
LMO1-202ENST00000428101 ZBTB7BO15156 539 aaPredicted RBP33.61■■■□□ 2.97
LMO1-202ENST00000428101 INPP5BP32019 993 aa33.61■■■□□ 2.97
LMO1-202ENST00000428101 PI16Q6UXB8 463 aa33.61■■■□□ 2.97
LMO1-202ENST00000428101 ITPRIPQ8IWB1 547 aa33.61■■■□□ 2.97
LMO1-202ENST00000428101 IDI2Q9BXS1 227 aa33.61■■■□□ 2.97
LMO1-202ENST00000428101 ARID4AP29374 1257 aaPredicted RBP33.6■■■□□ 2.97
LMO1-202ENST00000428101 SOX10P56693 466 aa33.6■■■□□ 2.97
LMO1-202ENST00000428101 GORABQ5T7V8 394 aa33.6■■■□□ 2.97
LMO1-202ENST00000428101 FAM43AQ8N2R8 423 aa33.6■■■□□ 2.97
LMO1-202ENST00000428101 ZNF384Q8TF68 577 aa33.6■■■□□ 2.97
LMO1-202ENST00000428101 RFX7Q2KHR2 1363 aa33.6■■■□□ 2.97
LMO1-202ENST00000428101 IRF6O14896 467 aa33.59■■■□□ 2.97
LMO1-202ENST00000428101 ERICH6Q7L0X2 663 aa33.59■■■□□ 2.97
LMO1-202ENST00000428101 SLF2Q8IX21 1173 aa33.59■■■□□ 2.97
LMO1-202ENST00000428101 SPATA5Q8NB90 893 aa33.59■■■□□ 2.97
LMO1-202ENST00000428101 RGS3P49796 1198 aa33.58■■■□□ 2.97
LMO1-202ENST00000428101 MECOMQ03112 1051 aa33.58■■■□□ 2.97
LMO1-202ENST00000428101 PPIL2Q13356 520 aa33.58■■■□□ 2.97
LMO1-202ENST00000428101 HTTP42858 3142 aa33.58■■■□□ 2.97
LMO1-202ENST00000428101 MROH7-TTC4A0A0A0MT08 1334 aa33.57■■■□□ 2.97
LMO1-202ENST00000428101 TBC1D9Q6ZT07 1266 aa33.57■■■□□ 2.96
LMO1-202ENST00000428101 OTOP1Q7RTM1 612 aa33.57■■■□□ 2.96
LMO1-202ENST00000428101 TRIM17Q9Y577 477 aa33.57■■■□□ 2.96
LMO1-202ENST00000428101 ENTPD3O75355 529 aa33.56■■■□□ 2.96
LMO1-202ENST00000428101 WDHD1O75717 1129 aaPredicted RBP33.56■■■□□ 2.96
LMO1-202ENST00000428101 CETPP11597 493 aa33.56■■■□□ 2.96
LMO1-202ENST00000428101 MCAMP43121 646 aa33.56■■■□□ 2.96
LMO1-202ENST00000428101 BTDP43251 543 aa33.56■■■□□ 2.96
LMO1-202ENST00000428101 GPR108Q9NPR9 543 aa33.56■■■□□ 2.96
LMO1-202ENST00000428101 ATRNL1Q5VV63 1379 aa33.56■■■□□ 2.96
LMO1-202ENST00000428101 GPR75-ASB3A0A0A6YYF3 556 aa33.55■■■□□ 2.96
LMO1-202ENST00000428101 CAP1Q01518 475 aa33.55■■■□□ 2.96
LMO1-202ENST00000428101 PPATQ06203 517 aa33.55■■■□□ 2.96
LMO1-202ENST00000428101 SNAPC2Q13487 334 aa33.55■■■□□ 2.96
LMO1-202ENST00000428101 TAF1CQ15572 869 aaPredicted RBP33.55■■■□□ 2.96
LMO1-202ENST00000428101 TNNI3KQ59H18 835 aa33.55■■■□□ 2.96
LMO1-202ENST00000428101 SH3BP5LQ7L8J4 393 aa33.55■■■□□ 2.96
LMO1-202ENST00000428101 CD99L2Q8TCZ2 262 aa33.55■■■□□ 2.96
LMO1-202ENST00000428101 ERO1AQ96HE7 468 aa33.55■■■□□ 2.96
LMO1-202ENST00000428101 DDX4Q9NQI0 724 aaKnown RBP33.55■■■□□ 2.96
LMO1-202ENST00000428101 FPGT-TNNI3KV9GXZ4 949 aa33.55■■■□□ 2.96
LMO1-202ENST00000428101 DOCK2Q92608 1830 aa33.55■■■□□ 2.96
LMO1-202ENST00000428101 SURF6O75683 361 aaKnown RBP33.54■■■□□ 2.96
LMO1-202ENST00000428101 SP3Q02447 781 aa33.54■■■□□ 2.96
LMO1-202ENST00000428101 NSUN4Q96CB9 384 aaKnown RBP33.54■■■□□ 2.96
LMO1-202ENST00000428101 ZFYVE28Q9HCC9 887 aa33.54■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 339.3 ms