RNA–Protein interactions for RNA: ENST00000424089.5

POLR1A-204, Transcript of RNA polymerase I subunit A, human

TSL 3

Gene POLR1A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR1A-204	ENST00000424089	SMC3	Q9UQE7	1217 aa		11.91	□□□□□ -0.5
POLR1A-204	ENST00000424089	ZDHHC9	Q9Y397	364 aa		11.91	□□□□□ -0.5
POLR1A-204	ENST00000424089	ATP6V1D	Q9Y5K8	247 aa		11.91	□□□□□ -0.5
POLR1A-204	ENST00000424089	ANKRD36C	Q5JPF3	1778 aa		11.9	□□□□□ -0.5
POLR1A-204	ENST00000424089	NTSR2	O95665	410 aa		11.9	□□□□□ -0.5
POLR1A-204	ENST00000424089	HUNK	P57058	714 aa		11.9	□□□□□ -0.5
POLR1A-204	ENST00000424089	MPND	Q8N594	471 aa		11.9	□□□□□ -0.5
POLR1A-204	ENST00000424089	GOLGA6L3	A6NEY3	463 aa		11.89	□□□□□ -0.51
POLR1A-204	ENST00000424089	BBOX1	O75936	387 aa		11.89	□□□□□ -0.51
POLR1A-204	ENST00000424089	RAD17	O75943	681 aa		11.89	□□□□□ -0.51
POLR1A-204	ENST00000424089	SLC5A1	P13866	664 aa		11.89	□□□□□ -0.51
POLR1A-204	ENST00000424089	PDC	P20941	246 aa		11.89	□□□□□ -0.51
POLR1A-204	ENST00000424089	IGHMBP2	P38935	993 aa	Known RBP	11.89	□□□□□ -0.51
POLR1A-204	ENST00000424089	KIAA2012	Q0VF49	1180 aa		11.89	□□□□□ -0.51
POLR1A-204	ENST00000424089	CDC5L	Q99459	802 aa	Known RBP	11.89	□□□□□ -0.51
POLR1A-204	ENST00000424089	MPHOSPH8	Q99549	860 aa		11.89	□□□□□ -0.51
POLR1A-204	ENST00000424089	RTFDC1	Q9BY42	306 aa	Predicted RBP	11.89	□□□□□ -0.51
POLR1A-204	ENST00000424089	SAGE1	Q9NXZ1	904 aa		11.89	□□□□□ -0.51
POLR1A-204	ENST00000424089	CNOT7	Q9UIV1	285 aa	Known RBP	11.89	□□□□□ -0.51
POLR1A-204	ENST00000424089	LAMB2	P55268	1798 aa		11.88	□□□□□ -0.51
POLR1A-204	ENST00000424089	FSD2	A1L4K1	749 aa		11.88	□□□□□ -0.51
POLR1A-204	ENST00000424089	MBD3	O95983	291 aa		11.88	□□□□□ -0.51
POLR1A-204	ENST00000424089	FGFR2	P21802	821 aa		11.88	□□□□□ -0.51
POLR1A-204	ENST00000424089	ARID4A	P29374	1257 aa	Predicted RBP	11.88	□□□□□ -0.51
POLR1A-204	ENST00000424089	ADORA1	P30542	326 aa		11.88	□□□□□ -0.51
POLR1A-204	ENST00000424089	SF3B3	Q15393	1217 aa	Known RBP	11.88	□□□□□ -0.51
POLR1A-204	ENST00000424089	SLC10A5	Q5PT55	438 aa		11.88	□□□□□ -0.51
POLR1A-204	ENST00000424089	MCTP1	Q6DN14	999 aa		11.88	□□□□□ -0.51
POLR1A-204	ENST00000424089	RGMB	Q6NW40	437 aa		11.88	□□□□□ -0.51
POLR1A-204	ENST00000424089	NOL8	Q76FK4	1167 aa	Known RBP	11.88	□□□□□ -0.51
POLR1A-204	ENST00000424089	SP8	Q8IXZ3	490 aa		11.88	□□□□□ -0.51
POLR1A-204	ENST00000424089	FBXL16	Q8N461	479 aa		11.88	□□□□□ -0.51
POLR1A-204	ENST00000424089	C2orf69	Q8N8R5	385 aa		11.88	□□□□□ -0.51
POLR1A-204	ENST00000424089	APPBP2	Q92624	585 aa		11.88	□□□□□ -0.51
POLR1A-204	ENST00000424089	CCDC102A	Q96A19	550 aa		11.88	□□□□□ -0.51
POLR1A-204	ENST00000424089	CCDC85A	Q96PX6	553 aa	Predicted RBP	11.88	□□□□□ -0.51
POLR1A-204	ENST00000424089	LMBRD1	Q9NUN5	540 aa		11.88	□□□□□ -0.51
POLR1A-204	ENST00000424089	DDX49	Q9Y6V7	483 aa	Known RBP	11.88	□□□□□ -0.51
POLR1A-204	ENST00000424089	HSPD1	P10809	573 aa	Known RBP	11.87	□□□□□ -0.51
POLR1A-204	ENST00000424089	MRE11	P49959	708 aa		11.87	□□□□□ -0.51
POLR1A-204	ENST00000424089	HIRA	P54198	1017 aa	Predicted RBP	11.87	□□□□□ -0.51
POLR1A-204	ENST00000424089	PKP1	Q13835	747 aa		11.87	□□□□□ -0.51
POLR1A-204	ENST00000424089	UBE3C	Q15386	1083 aa		11.87	□□□□□ -0.51
POLR1A-204	ENST00000424089	CSPP1	Q1MSJ5	1256 aa		11.87	□□□□□ -0.51
POLR1A-204	ENST00000424089	C3orf67	Q6ZVT6	689 aa		11.87	□□□□□ -0.51
POLR1A-204	ENST00000424089	DHX32	Q7L7V1	743 aa	Known RBP	11.87	□□□□□ -0.51
POLR1A-204	ENST00000424089	USP48	Q86UV5	1035 aa		11.87	□□□□□ -0.51
POLR1A-204	ENST00000424089	MICALL2	Q8IY33	904 aa		11.87	□□□□□ -0.51
POLR1A-204	ENST00000424089	TRPM4	Q8TD43	1214 aa		11.87	□□□□□ -0.51
POLR1A-204	ENST00000424089	ZIC5	Q96T25	663 aa		11.87	□□□□□ -0.51
POLR1A-204	ENST00000424089	POLR2A	P24928	1970 aa	Known RBP	11.87	□□□□□ -0.51
POLR1A-204	ENST00000424089	MAST3	O60307	1309 aa		11.86	□□□□□ -0.51
POLR1A-204	ENST00000424089	STX6	O43752	255 aa		11.86	□□□□□ -0.51
POLR1A-204	ENST00000424089	CYP21A2	P08686	494 aa		11.86	□□□□□ -0.51
POLR1A-204	ENST00000424089	ZSCAN22	P10073	491 aa	Predicted RBP	11.86	□□□□□ -0.51
POLR1A-204	ENST00000424089	NCL	P19338	710 aa	Known RBP	11.86	□□□□□ -0.51
POLR1A-204	ENST00000424089	ZAP70	P43403	619 aa		11.86	□□□□□ -0.51
POLR1A-204	ENST00000424089	ME3	Q16798	604 aa		11.86	□□□□□ -0.51
POLR1A-204	ENST00000424089	CCDC102B	Q68D86	513 aa		11.86	□□□□□ -0.51
POLR1A-204	ENST00000424089	TMC4	Q7Z404	712 aa		11.86	□□□□□ -0.51
POLR1A-204	ENST00000424089	SLC51A	Q86UW1	340 aa		11.86	□□□□□ -0.51
POLR1A-204	ENST00000424089	DCPS	Q96C86	337 aa	Known RBP	11.86	□□□□□ -0.51
POLR1A-204	ENST00000424089	SEC62	Q99442	399 aa	Known RBP	11.86	□□□□□ -0.51
POLR1A-204	ENST00000424089	GBA2	Q9HCG7	927 aa	Predicted RBP	11.86	□□□□□ -0.51
POLR1A-204	ENST00000424089	TPCN1	Q9ULQ1	816 aa		11.86	□□□□□ -0.51
POLR1A-204	ENST00000424089	NDUFB9	Q9Y6M9	179 aa		11.86	□□□□□ -0.51
POLR1A-204	ENST00000424089	TRPA1	O75762	1119 aa		11.85	□□□□□ -0.51
POLR1A-204	ENST00000424089	HCLS1	P14317	486 aa	Predicted RBP	11.85	□□□□□ -0.51
POLR1A-204	ENST00000424089	CPA1	P15085	419 aa		11.85	□□□□□ -0.51
POLR1A-204	ENST00000424089	SYT1	P21579	422 aa		11.85	□□□□□ -0.51
POLR1A-204	ENST00000424089	MCAM	P43121	646 aa		11.85	□□□□□ -0.51
POLR1A-204	ENST00000424089	ZNF157	P51786	506 aa	Predicted RBP	11.85	□□□□□ -0.51
POLR1A-204	ENST00000424089	GRAP	Q13588	217 aa		11.85	□□□□□ -0.51
POLR1A-204	ENST00000424089	TOB2	Q14106	344 aa	Predicted RBP	11.85	□□□□□ -0.51
POLR1A-204	ENST00000424089	IMMT	Q16891	758 aa	Known RBP	11.85	□□□□□ -0.51
POLR1A-204	ENST00000424089	WASHC4	Q2M389	1173 aa		11.85	□□□□□ -0.51
POLR1A-204	ENST00000424089	CCDC129	Q6ZRS4	1044 aa		11.85	□□□□□ -0.51
POLR1A-204	ENST00000424089	KRT26	Q7Z3Y9	468 aa		11.85	□□□□□ -0.51
POLR1A-204	ENST00000424089	CTU1	Q7Z7A3	348 aa	Known RBP	11.85	□□□□□ -0.51
POLR1A-204	ENST00000424089	REM2	Q8IYK8	340 aa	Predicted RBP	11.85	□□□□□ -0.51
POLR1A-204	ENST00000424089	TMEM87A	Q8NBN3	555 aa		11.85	□□□□□ -0.51
POLR1A-204	ENST00000424089	GRAPL	Q8TC17	118 aa	Predicted RBP	11.85	□□□□□ -0.51
POLR1A-204	ENST00000424089	DPF2	Q92785	391 aa		11.85	□□□□□ -0.51
POLR1A-204	ENST00000424089	OSBP2	Q969R2	916 aa		11.85	□□□□□ -0.51
POLR1A-204	ENST00000424089	LLPH	Q9BRT6	129 aa	Known RBP	11.85	□□□□□ -0.51
POLR1A-204	ENST00000424089	AGXT2	Q9BYV1	514 aa		11.85	□□□□□ -0.51
POLR1A-204	ENST00000424089	DDX60	Q8IY21	1712 aa	Known RBP	11.85	□□□□□ -0.51
POLR1A-204	ENST00000424089	WDR19	Q8NEZ3	1342 aa		11.85	□□□□□ -0.51
POLR1A-204	ENST00000424089	ZBTB22	O15209	634 aa		11.84	□□□□□ -0.51
POLR1A-204	ENST00000424089	IGSF3	O75054	1194 aa		11.84	□□□□□ -0.51
POLR1A-204	ENST00000424089	PRPF40A	O75400	957 aa	Known RBP	11.84	□□□□□ -0.51
POLR1A-204	ENST00000424089	RPS12	P25398	132 aa	Known RBP	11.84	□□□□□ -0.51
POLR1A-204	ENST00000424089	GJB2	P29033	226 aa		11.84	□□□□□ -0.51
POLR1A-204	ENST00000424089	ADD2	P35612	726 aa		11.84	□□□□□ -0.51
POLR1A-204	ENST00000424089	EXOSC10	Q01780	885 aa	Known RBP	11.84	□□□□□ -0.51
POLR1A-204	ENST00000424089	KIF23	Q02241	960 aa	Predicted RBP	11.84	□□□□□ -0.51
POLR1A-204	ENST00000424089	HABP4	Q5JVS0	413 aa	Known RBP	11.84	□□□□□ -0.51
POLR1A-204	ENST00000424089	CCDC83	Q8IWF9	413 aa		11.84	□□□□□ -0.51
POLR1A-204	ENST00000424089	KIF3A	Q9Y496	699 aa		11.84	□□□□□ -0.51
POLR1A-204	ENST00000424089	YDJC	A8MPS7	323 aa		11.83	□□□□□ -0.52

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