RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 DOCK1Q14185 1865 aa20.11■□□□□ 0.81
COL18A1-205ENST00000423214 PTPRFP10586 1907 aa20.1■□□□□ 0.81
COL18A1-205ENST00000423214 CETPP11597 493 aa20.1■□□□□ 0.81
COL18A1-205ENST00000423214 INTS3Q68E01 1043 aaKnown RBP20.1■□□□□ 0.81
COL18A1-205ENST00000423214 ZNF341Q9BYN7 854 aa20.1■□□□□ 0.81
COL18A1-205ENST00000423214 PTPN22Q9Y2R2 807 aa20.1■□□□□ 0.81
COL18A1-205ENST00000423214 LRRFIP2Q9Y608 721 aaKnown RBP20.1■□□□□ 0.81
COL18A1-205ENST00000423214 MGAMO43451 1857 aa20.09■□□□□ 0.81
COL18A1-205ENST00000423214 LDHBP07195 334 aaKnown RBP20.09■□□□□ 0.81
COL18A1-205ENST00000423214 PRDX5P30044 214 aa20.09■□□□□ 0.81
COL18A1-205ENST00000423214 ARHGEF6Q15052 776 aa20.09■□□□□ 0.81
COL18A1-205ENST00000423214 TRMT2AQ8IZ69 625 aaKnown RBP20.09■□□□□ 0.81
COL18A1-205ENST00000423214 ZKSCAN4Q969J2 545 aaPredicted RBP20.09■□□□□ 0.81
COL18A1-205ENST00000423214 DAGLAQ9Y4D2 1042 aa20.09■□□□□ 0.81
COL18A1-205ENST00000423214 IL15P40933 162 aaPredicted RBP20.08■□□□□ 0.81
COL18A1-205ENST00000423214 PPIL2Q13356 520 aa20.08■□□□□ 0.81
COL18A1-205ENST00000423214 SNAPC2Q13487 334 aa20.08■□□□□ 0.81
COL18A1-205ENST00000423214 DIXDC1Q155Q3 683 aa20.08■□□□□ 0.81
COL18A1-205ENST00000423214 FAM43AQ8N2R8 423 aa20.08■□□□□ 0.81
COL18A1-205ENST00000423214 FAM151AQ8WW52 585 aa20.08■□□□□ 0.81
COL18A1-205ENST00000423214 DENND2AQ9ULE3 1009 aa20.08■□□□□ 0.81
COL18A1-205ENST00000423214 ATAD5Q96QE3 1844 aa20.07■□□□□ 0.8
COL18A1-205ENST00000423214 SEMA3EO15041 775 aa20.07■□□□□ 0.8
COL18A1-205ENST00000423214 TCP10Q12799 353 aa20.07■□□□□ 0.8
COL18A1-205ENST00000423214 PA2G4Q9UQ80 394 aaKnown RBP20.07■□□□□ 0.8
COL18A1-205ENST00000423214 SALL1Q9NSC2 1324 aa20.06■□□□□ 0.8
COL18A1-205ENST00000423214 IRF6O14896 467 aa20.06■□□□□ 0.8
COL18A1-205ENST00000423214 PHKA1P46020 1223 aa20.06■□□□□ 0.8
COL18A1-205ENST00000423214 MIGA2Q7L4E1 593 aa20.06■□□□□ 0.8
COL18A1-205ENST00000423214 ZGPATQ8N5A5 531 aaKnown RBP20.06■□□□□ 0.8
COL18A1-205ENST00000423214 MEIS3Q99687 375 aa20.06■□□□□ 0.8
COL18A1-205ENST00000423214 ZCCHC17Q9NP64 241 aaKnown RBP20.06■□□□□ 0.8
COL18A1-205ENST00000423214 PHIPQ8WWQ0 1821 aa20.05■□□□□ 0.8
COL18A1-205ENST00000423214 BRCA2P51587 3418 aa20.05■□□□□ 0.8
COL18A1-205ENST00000423214 CCER2I3L3R5 266 aa20.05■□□□□ 0.8
COL18A1-205ENST00000423214 KIF22Q14807 665 aa20.05■□□□□ 0.8
COL18A1-205ENST00000423214 CDC42EP5Q6NZY7 148 aa20.05■□□□□ 0.8
COL18A1-205ENST00000423214 MAST2Q6P0Q8 1798 aa20.05■□□□□ 0.8
COL18A1-205ENST00000423214 POTEFA5A3E0 1075 aa20.04■□□□□ 0.8
COL18A1-205ENST00000423214 BTBD19C9JJ37 291 aa20.04■□□□□ 0.8
COL18A1-205ENST00000423214 INPP5BP32019 993 aa20.04■□□□□ 0.8
COL18A1-205ENST00000423214 PPATQ06203 517 aa20.04■□□□□ 0.8
COL18A1-205ENST00000423214 SLC9C1Q4G0N8 1177 aa20.04■□□□□ 0.8
COL18A1-205ENST00000423214 ARMC5Q96C12 935 aa20.04■□□□□ 0.8
COL18A1-205ENST00000423214 TLR2O60603 784 aa20.03■□□□□ 0.8
COL18A1-205ENST00000423214 GNAI3P08754 354 aa20.03■□□□□ 0.8
COL18A1-205ENST00000423214 RARSP54136 660 aaKnown RBP20.03■□□□□ 0.8
COL18A1-205ENST00000423214 CAP1Q01518 475 aa20.03■□□□□ 0.8
COL18A1-205ENST00000423214 NFIAQ12857 509 aa20.03■□□□□ 0.8
COL18A1-205ENST00000423214 CCDC102BQ68D86 513 aa20.03■□□□□ 0.8
COL18A1-205ENST00000423214 DZIP1Q86YF9 867 aaKnown RBP20.03■□□□□ 0.8
COL18A1-205ENST00000423214 COPRSQ9NQ92 184 aa20.03■□□□□ 0.8
COL18A1-205ENST00000423214 USP40Q9NVE5 1235 aa20.03■□□□□ 0.8
COL18A1-205ENST00000423214 PTCH2Q9Y6C5 1203 aa20.03■□□□□ 0.8
COL18A1-205ENST00000423214 MKI67P46013 3256 aaKnown RBP20.02■□□□□ 0.8
COL18A1-205ENST00000423214 ADORA1P30542 326 aa20.02■□□□□ 0.8
COL18A1-205ENST00000423214 NBPF11Q86T75 865 aa20.02■□□□□ 0.8
COL18A1-205ENST00000423214 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.02■□□□□ 0.8
COL18A1-205ENST00000423214 SRGAP3O43295 1099 aa20.01■□□□□ 0.79
COL18A1-205ENST00000423214 LACTBP83111 547 aaPredicted RBP20.01■□□□□ 0.79
COL18A1-205ENST00000423214 SLF2Q8IX21 1173 aa20.01■□□□□ 0.79
COL18A1-205ENST00000423214 ARHGAP45Q92619 1136 aa20.01■□□□□ 0.79
COL18A1-205ENST00000423214 TMEM106CQ9BVX2 250 aa20.01■□□□□ 0.79
COL18A1-205ENST00000423214 FAM198AQ9UFP1 575 aa20.01■□□□□ 0.79
COL18A1-205ENST00000423214 ABCF2Q9UG63 623 aa20.01■□□□□ 0.79
COL18A1-205ENST00000423214 AKAP2Q9Y2D5 859 aa20.01■□□□□ 0.79
COL18A1-205ENST00000423214 CDK5RAP2Q96SN8 1893 aa20.01■□□□□ 0.79
COL18A1-205ENST00000423214 PDS5AQ29RF7 1337 aaKnown RBP20.01■□□□□ 0.79
COL18A1-205ENST00000423214 RASGRF1Q13972 1273 aa20■□□□□ 0.79
COL18A1-205ENST00000423214 MVPQ14764 893 aaKnown RBP20■□□□□ 0.79
COL18A1-205ENST00000423214 NOL9Q5SY16 702 aaKnown RBP20■□□□□ 0.79
COL18A1-205ENST00000423214 ZNF112Q9UJU3 913 aa20■□□□□ 0.79
COL18A1-205ENST00000423214 GAKO14976 1311 aa20■□□□□ 0.79
COL18A1-205ENST00000423214 RFX7Q2KHR2 1363 aa19.99■□□□□ 0.79
COL18A1-205ENST00000423214 A0A1B0GUL7 405 aa19.99■□□□□ 0.79
COL18A1-205ENST00000423214 SPTY2D1Q68D10 685 aaPredicted RBP19.99■□□□□ 0.79
COL18A1-205ENST00000423214 ZSCAN29Q8IWY8 852 aaPredicted RBP19.99■□□□□ 0.79
COL18A1-205ENST00000423214 ZNF333Q96JL9 665 aa19.99■□□□□ 0.79
COL18A1-205ENST00000423214 FOCADQ5VW36 1801 aa19.99■□□□□ 0.79
COL18A1-205ENST00000423214 MYO5AQ9Y4I1 1855 aaKnown RBP19.99■□□□□ 0.79
COL18A1-205ENST00000423214 ZBTB22O15209 634 aa19.98■□□□□ 0.79
COL18A1-205ENST00000423214 IPO8O15397 1037 aaKnown RBP19.98■□□□□ 0.79
COL18A1-205ENST00000423214 RGS3P49796 1198 aa19.98■□□□□ 0.79
COL18A1-205ENST00000423214 TFCP2Q12800 502 aa19.98■□□□□ 0.79
COL18A1-205ENST00000423214 DIEXFQ68CQ4 756 aaKnown RBP19.98■□□□□ 0.79
COL18A1-205ENST00000423214 ANKRD23Q86SG2 305 aa19.98■□□□□ 0.79
COL18A1-205ENST00000423214 MIER1Q8N108 512 aa19.98■□□□□ 0.79
COL18A1-205ENST00000423214 ARHGAP39Q9C0H5 1083 aa19.98■□□□□ 0.79
COL18A1-205ENST00000423214 KCNH4Q9UQ05 1017 aa19.98■□□□□ 0.79
COL18A1-205ENST00000423214 PDHXO00330 501 aa19.97■□□□□ 0.79
COL18A1-205ENST00000423214 ENTPD3O75355 529 aa19.97■□□□□ 0.79
COL18A1-205ENST00000423214 GNRH1P01148 92 aa19.97■□□□□ 0.79
COL18A1-205ENST00000423214 TIMM10P62072 90 aa19.97■□□□□ 0.79
COL18A1-205ENST00000423214 MTX1Q13505 466 aa19.97■□□□□ 0.79
COL18A1-205ENST00000423214 SLC4A8Q2Y0W8 1093 aa19.97■□□□□ 0.79
COL18A1-205ENST00000423214 FRAT1Q92837 279 aaPredicted RBP19.97■□□□□ 0.79
COL18A1-205ENST00000423214 XAGE2Q96GT9 111 aa19.97■□□□□ 0.79
COL18A1-205ENST00000423214 IDI2Q9BXS1 227 aa19.97■□□□□ 0.79
COL18A1-205ENST00000423214 PICK1Q9NRD5 415 aa19.97■□□□□ 0.79
COL18A1-205ENST00000423214 MROH7-TTC4A0A0A0MT08 1334 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms