RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 ZNF790Q6PG37 636 aa19.16■□□□□ 0.66
NPC1L1-203ENST00000423141 CCDC12Q8WUD4 166 aaPredicted RBP19.16■□□□□ 0.66
NPC1L1-203ENST00000423141 ATRIPQ8WXE1 791 aa19.16■□□□□ 0.66
NPC1L1-203ENST00000423141 RASSF4Q9H2L5 321 aa19.16■□□□□ 0.66
NPC1L1-203ENST00000423141 PCDHA5Q9Y5H7 936 aa19.16■□□□□ 0.66
NPC1L1-203ENST00000423141 TXLNAP40222 546 aa19.15■□□□□ 0.66
NPC1L1-203ENST00000423141 HSP90AB3PQ58FF7 597 aa19.15■□□□□ 0.66
NPC1L1-203ENST00000423141 OLFM4Q6UX06 510 aa19.15■□□□□ 0.66
NPC1L1-203ENST00000423141 ATG9AQ7Z3C6 839 aa19.15■□□□□ 0.66
NPC1L1-203ENST00000423141 EXOC4Q96A65 974 aa19.15■□□□□ 0.66
NPC1L1-203ENST00000423141 C19orf44Q9H6X5 657 aa19.15■□□□□ 0.66
NPC1L1-203ENST00000423141 MCM6Q14566 821 aa19.14■□□□□ 0.65
NPC1L1-203ENST00000423141 PTPAQ15257 358 aa19.14■□□□□ 0.65
NPC1L1-203ENST00000423141 SPECC1Q5M775 1068 aa19.14■□□□□ 0.65
NPC1L1-203ENST00000423141 VPS37DQ86XT2 251 aa19.14■□□□□ 0.65
NPC1L1-203ENST00000423141 FBXL16Q8N461 479 aa19.14■□□□□ 0.65
NPC1L1-203ENST00000423141 RBM33Q96EV2 1170 aaKnown RBP19.14■□□□□ 0.65
NPC1L1-203ENST00000423141 AK7Q96M32 723 aa19.14■□□□□ 0.65
NPC1L1-203ENST00000423141 PDE11AQ9HCR9 933 aa19.14■□□□□ 0.65
NPC1L1-203ENST00000423141 PHF8Q9UPP1 1060 aa19.14■□□□□ 0.65
NPC1L1-203ENST00000423141 C5P01031 1676 aa19.14■□□□□ 0.65
NPC1L1-203ENST00000423141 MAP2K7O14733 419 aa19.14■□□□□ 0.65
NPC1L1-203ENST00000423141 STX10O60499 249 aa19.14■□□□□ 0.65
NPC1L1-203ENST00000423141 FMR1Q06787 632 aaKnown RBP eCLIP19.14■□□□□ 0.65
NPC1L1-203ENST00000423141 LRP10Q7Z4F1 713 aa19.14■□□□□ 0.65
NPC1L1-203ENST00000423141 GOLGA5Q8TBA6 731 aa19.14■□□□□ 0.65
NPC1L1-203ENST00000423141 SUGCTQ9HAC7 445 aa19.14■□□□□ 0.65
NPC1L1-203ENST00000423141 ATG3Q9NT62 314 aa19.14■□□□□ 0.65
NPC1L1-203ENST00000423141 PUF60Q9UHX1 559 aaKnown RBP19.14■□□□□ 0.65
NPC1L1-203ENST00000423141 DENND2AQ9ULE3 1009 aa19.14■□□□□ 0.65
NPC1L1-203ENST00000423141 DHX16O60231 1041 aaKnown RBP19.13■□□□□ 0.65
NPC1L1-203ENST00000423141 TFRCP02786 760 aaKnown RBP19.13■□□□□ 0.65
NPC1L1-203ENST00000423141 RXRAP19793 462 aa19.13■□□□□ 0.65
NPC1L1-203ENST00000423141 MB21D2Q8IYB1 491 aaPredicted RBP19.13■□□□□ 0.65
NPC1L1-203ENST00000423141 TRMT44Q8IYL2 757 aaKnown RBP19.13■□□□□ 0.65
NPC1L1-203ENST00000423141 N4BP1O75113 896 aaKnown RBP19.13■□□□□ 0.65
NPC1L1-203ENST00000423141 IFIT1P09914 478 aaKnown RBP19.13■□□□□ 0.65
NPC1L1-203ENST00000423141 NKX2-3Q8TAU0 364 aa19.13■□□□□ 0.65
NPC1L1-203ENST00000423141 CHMP4CQ96CF2 233 aa19.13■□□□□ 0.65
NPC1L1-203ENST00000423141 ANKZF1Q9H8Y5 726 aa19.13■□□□□ 0.65
NPC1L1-203ENST00000423141 LZTFL1Q9NQ48 299 aa19.13■□□□□ 0.65
NPC1L1-203ENST00000423141 VPS18Q9P253 973 aa19.13■□□□□ 0.65
NPC1L1-203ENST00000423141 CCDC151A5D8V7 595 aa19.12■□□□□ 0.65
NPC1L1-203ENST00000423141 GOLGA6L9A6NEM1 432 aa19.12■□□□□ 0.65
NPC1L1-203ENST00000423141 ZNF827Q17R98 1081 aa19.12■□□□□ 0.65
NPC1L1-203ENST00000423141 RESP18Q5W5W9 173 aa19.12■□□□□ 0.65
NPC1L1-203ENST00000423141 SPECC1LQ69YQ0 1117 aa19.12■□□□□ 0.65
NPC1L1-203ENST00000423141 WWC2Q6AWC2 1192 aa19.12■□□□□ 0.65
NPC1L1-203ENST00000423141 SRLQ86TD4 932 aa19.12■□□□□ 0.65
NPC1L1-203ENST00000423141 ZNF496Q96IT1 587 aaPredicted RBP19.12■□□□□ 0.65
NPC1L1-203ENST00000423141 OVOS2A0A0G2JMS6 1433 aa19.12■□□□□ 0.65
NPC1L1-203ENST00000423141 NWD2Q9ULI1 1742 aa19.12■□□□□ 0.65
NPC1L1-203ENST00000423141 SOWAHDA6NJG2 315 aa19.12■□□□□ 0.65
NPC1L1-203ENST00000423141 FGAP02671 866 aa19.12■□□□□ 0.65
NPC1L1-203ENST00000423141 TNNT3P45378 269 aaPredicted RBP19.12■□□□□ 0.65
NPC1L1-203ENST00000423141 CASP7P55210 303 aa19.12■□□□□ 0.65
NPC1L1-203ENST00000423141 CHMP4BP1P59074 171 aa19.12■□□□□ 0.65
NPC1L1-203ENST00000423141 CERS3Q8IU89 383 aa19.12■□□□□ 0.65
NPC1L1-203ENST00000423141 CNNM3Q8NE01 707 aa19.12■□□□□ 0.65
NPC1L1-203ENST00000423141 PNKPQ96T60 521 aa19.12■□□□□ 0.65
NPC1L1-203ENST00000423141 MAP3K14Q99558 947 aa19.12■□□□□ 0.65
NPC1L1-203ENST00000423141 SIPA1L3O60292 1781 aaPredicted RBP19.11■□□□□ 0.65
NPC1L1-203ENST00000423141 LRRC24Q50LG9 513 aa19.11■□□□□ 0.65
NPC1L1-203ENST00000423141 FOXR1Q6PIV2 292 aa19.11■□□□□ 0.65
NPC1L1-203ENST00000423141 ANKRD24Q8TF21 1146 aa19.11■□□□□ 0.65
NPC1L1-203ENST00000423141 ZNF594Q96JF6 807 aaPredicted RBP19.11■□□□□ 0.65
NPC1L1-203ENST00000423141 ALG1Q9BT22 464 aa19.11■□□□□ 0.65
NPC1L1-203ENST00000423141 RRP15Q9Y3B9 282 aaKnown RBP19.11■□□□□ 0.65
NPC1L1-203ENST00000423141 NFE2L3Q9Y4A8 694 aa19.11■□□□□ 0.65
NPC1L1-203ENST00000423141 ACTN2P35609 894 aa19.11■□□□□ 0.65
NPC1L1-203ENST00000423141 FKBP4Q02790 459 aaKnown RBP eCLIP19.11■□□□□ 0.65
NPC1L1-203ENST00000423141 PHKBQ93100 1093 aa19.11■□□□□ 0.65
NPC1L1-203ENST00000423141 PSD3Q9NYI0 1048 aa19.11■□□□□ 0.65
NPC1L1-203ENST00000423141 KCNH3Q9ULD8 1083 aa19.11■□□□□ 0.65
NPC1L1-203ENST00000423141 UBE2Q2LH0YL09 131 aa19.1■□□□□ 0.65
NPC1L1-203ENST00000423141 PPP6R2O75170 966 aa19.1■□□□□ 0.65
NPC1L1-203ENST00000423141 IMMTQ16891 758 aaKnown RBP19.1■□□□□ 0.65
NPC1L1-203ENST00000423141 WASHC4Q2M389 1173 aa19.1■□□□□ 0.65
NPC1L1-203ENST00000423141 BEND6Q5SZJ8 279 aaPredicted RBP19.1■□□□□ 0.65
NPC1L1-203ENST00000423141 CCDC102BQ68D86 513 aa19.1■□□□□ 0.65
NPC1L1-203ENST00000423141 KRT40Q6A162 431 aa19.1■□□□□ 0.65
NPC1L1-203ENST00000423141 CWC15Q9P013 229 aaKnown RBP19.1■□□□□ 0.65
NPC1L1-203ENST00000423141 CUTAO60888 179 aa19.1■□□□□ 0.65
NPC1L1-203ENST00000423141 FOXO4P98177 505 aa19.1■□□□□ 0.65
NPC1L1-203ENST00000423141 MED15Q96RN5 788 aa19.1■□□□□ 0.65
NPC1L1-203ENST00000423141 ZNF18P17022 549 aa19.09■□□□□ 0.65
NPC1L1-203ENST00000423141 BRD3Q15059 726 aa19.09■□□□□ 0.65
NPC1L1-203ENST00000423141 TEX13AQ9BXU3 409 aaPredicted RBP19.09■□□□□ 0.65
NPC1L1-203ENST00000423141 SAMSN1Q9NSI8 373 aaKnown RBP19.09■□□□□ 0.65
NPC1L1-203ENST00000423141 AFDNP55196 1824 aaKnown RBP19.09■□□□□ 0.65
NPC1L1-203ENST00000423141 FAM237AA0A1B0GTK4 181 aa19.09■□□□□ 0.65
NPC1L1-203ENST00000423141 PRR29P0C7W0 189 aa19.09■□□□□ 0.65
NPC1L1-203ENST00000423141 SRGAP1Q7Z6B7 1085 aa19.09■□□□□ 0.65
NPC1L1-203ENST00000423141 MAN1B1Q9UKM7 699 aa19.09■□□□□ 0.65
NPC1L1-203ENST00000423141 AXIN2Q9Y2T1 843 aa19.09■□□□□ 0.65
NPC1L1-203ENST00000423141 A0A1B0GUL7 405 aa19.08■□□□□ 0.65
NPC1L1-203ENST00000423141 MDM2Q00987 491 aaPredicted RBP19.08■□□□□ 0.65
NPC1L1-203ENST00000423141 GRAMD1CQ8IYS0 662 aa19.08■□□□□ 0.65
NPC1L1-203ENST00000423141 JMYQ8N9B5 988 aa19.08■□□□□ 0.65
NPC1L1-203ENST00000423141 GRIN1Q05586 938 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms