RNA–Protein interactions for RNA: ENST00000420973.5

CHRD-204, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,492 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-204ENST00000420973 ARMT1Q9H993 441 aa16.74■□□□□ 0.27
CHRD-204ENST00000420973 TFCP2L1Q9NZI6 479 aa16.74■□□□□ 0.27
CHRD-204ENST00000420973 SSR1P43307 286 aaKnown RBP16.74■□□□□ 0.27
CHRD-204ENST00000420973 SYCP1Q15431 976 aa16.74■□□□□ 0.27
CHRD-204ENST00000420973 SRLQ86TD4 932 aa16.74■□□□□ 0.27
CHRD-204ENST00000420973 KCNF1Q9H3M0 494 aa16.74■□□□□ 0.27
CHRD-204ENST00000420973 ZNF532Q9HCE3 1301 aa16.74■□□□□ 0.27
CHRD-204ENST00000420973 EP400Q96L91 3159 aa16.73■□□□□ 0.27
CHRD-204ENST00000420973 ZPR1O75312 459 aa16.73■□□□□ 0.27
CHRD-204ENST00000420973 LRMPQ12912 555 aa16.73■□□□□ 0.27
CHRD-204ENST00000420973 KRT32Q14532 448 aa16.73■□□□□ 0.27
CHRD-204ENST00000420973 USPL1Q5W0Q7 1092 aa16.73■□□□□ 0.27
CHRD-204ENST00000420973 CLEC17AQ6ZS10 378 aa16.73■□□□□ 0.27
CHRD-204ENST00000420973 PACS2Q86VP3 889 aa16.73■□□□□ 0.27
CHRD-204ENST00000420973 SMARCE1Q969G3 411 aa16.73■□□□□ 0.27
CHRD-204ENST00000420973 AK7Q96M32 723 aa16.73■□□□□ 0.27
CHRD-204ENST00000420973 PALLDQ8WX93 1383 aa16.73■□□□□ 0.27
CHRD-204ENST00000420973 GOLGA8BA8MQT2 603 aa16.73■□□□□ 0.27
CHRD-204ENST00000420973 ANKRD1Q15327 319 aa16.73■□□□□ 0.27
CHRD-204ENST00000420973 UVSSAQ2YD98 709 aa16.73■□□□□ 0.27
CHRD-204ENST00000420973 LEKR1Q6ZMV7 388 aa16.73■□□□□ 0.27
CHRD-204ENST00000420973 NBPF5PQ86XG9 351 aaPredicted RBP16.73■□□□□ 0.27
CHRD-204ENST00000420973 ZCCHC17Q9NP64 241 aaKnown RBP16.73■□□□□ 0.27
CHRD-204ENST00000420973 PIH1D3Q9NQM4 214 aaKnown RBP16.73■□□□□ 0.27
CHRD-204ENST00000420973 MTMR6Q9Y217 621 aa16.73■□□□□ 0.27
CHRD-204ENST00000420973 SPATA31A1Q5TZJ5 1347 aa16.73■□□□□ 0.27
CHRD-204ENST00000420973 KLF18A0A0U1RQI7 1052 aa16.73■□□□□ 0.27
CHRD-204ENST00000420973 IL6STP40189 918 aaPredicted RBP16.73■□□□□ 0.27
CHRD-204ENST00000420973 NBPF20Q3BBV1 942 aa16.73■□□□□ 0.27
CHRD-204ENST00000420973 ERFEQ4G0M1 354 aa16.73■□□□□ 0.27
CHRD-204ENST00000420973 C5P01031 1676 aa16.73■□□□□ 0.27
CHRD-204ENST00000420973 PDE8BO95263 885 aa16.72■□□□□ 0.27
CHRD-204ENST00000420973 SPATA32Q96LK8 384 aa16.72■□□□□ 0.27
CHRD-204ENST00000420973 B4E1Z4 1266 aa16.72■□□□□ 0.27
CHRD-204ENST00000420973 H0YHG0 523 aa16.72■□□□□ 0.27
CHRD-204ENST00000420973 KIF1CO43896 1103 aaKnown RBP16.72■□□□□ 0.27
CHRD-204ENST00000420973 SLC5A1P13866 664 aa16.72■□□□□ 0.27
CHRD-204ENST00000420973 ARID4AP29374 1257 aaPredicted RBP16.72■□□□□ 0.27
CHRD-204ENST00000420973 SARNPP82979 210 aaKnown RBP16.72■□□□□ 0.27
CHRD-204ENST00000420973 ST3GAL1Q11201 340 aa16.72■□□□□ 0.27
CHRD-204ENST00000420973 CCDC186Q7Z3E2 898 aa16.72■□□□□ 0.27
CHRD-204ENST00000420973 NUP133Q8WUM0 1156 aa16.72■□□□□ 0.27
CHRD-204ENST00000420973 MBD4O95243 580 aa16.72■□□□□ 0.27
CHRD-204ENST00000420973 CTDSPL2Q05D32 466 aa16.72■□□□□ 0.27
CHRD-204ENST00000420973 ERCC4Q92889 916 aaPredicted RBP16.72■□□□□ 0.27
CHRD-204ENST00000420973 PRKAB2O43741 272 aa16.71■□□□□ 0.27
CHRD-204ENST00000420973 KRT85P78386 507 aa16.71■□□□□ 0.27
CHRD-204ENST00000420973 LRRFIP1Q32MZ4 808 aaKnown RBP16.71■□□□□ 0.27
CHRD-204ENST00000420973 CCDC152Q4G0S7 254 aa16.71■□□□□ 0.27
CHRD-204ENST00000420973 HMG20BQ9P0W2 317 aa16.71■□□□□ 0.27
CHRD-204ENST00000420973 PRC1O43663 620 aa16.71■□□□□ 0.27
CHRD-204ENST00000420973 SF3A1Q15459 793 aaKnown RBP16.71■□□□□ 0.27
CHRD-204ENST00000420973 ZMYM1Q5SVZ6 1142 aa16.71■□□□□ 0.27
CHRD-204ENST00000420973 DHX32Q7L7V1 743 aaKnown RBP16.71■□□□□ 0.27
CHRD-204ENST00000420973 CMTR1Q8N1G2 835 aaKnown RBP16.71■□□□□ 0.27
CHRD-204ENST00000420973 NAPBQ9H115 298 aa16.71■□□□□ 0.27
CHRD-204ENST00000420973 CCNL1Q9UK58 526 aaPredicted RBP16.71■□□□□ 0.27
CHRD-204ENST00000420973 PHRF1Q9P1Y6 1649 aaKnown RBP16.71■□□□□ 0.27
CHRD-204ENST00000420973 A0A087WWV3 80 aa16.71■□□□□ 0.26
CHRD-204ENST00000420973 SCRN1Q12765 414 aa16.71■□□□□ 0.26
CHRD-204ENST00000420973 SLC51AQ86UW1 340 aa16.71■□□□□ 0.26
CHRD-204ENST00000420973 PRDM1O75626 825 aa16.7■□□□□ 0.26
CHRD-204ENST00000420973 MUM1L1Q5H9M0 696 aa16.7■□□□□ 0.26
CHRD-204ENST00000420973 INTS5Q6P9B9 1019 aaKnown RBP16.7■□□□□ 0.26
CHRD-204ENST00000420973 GPR101Q96P66 508 aaPredicted RBP16.7■□□□□ 0.26
CHRD-204ENST00000420973 PTPDC1A2A3K4 754 aa16.7■□□□□ 0.26
CHRD-204ENST00000420973 RIPOR2Q9Y4F9 1068 aa16.7■□□□□ 0.26
CHRD-204ENST00000420973 TMCO3Q6UWJ1 677 aa16.69■□□□□ 0.26
CHRD-204ENST00000420973 C3orf67Q6ZVT6 689 aa16.69■□□□□ 0.26
CHRD-204ENST00000420973 PRPF38AQ8NAV1 312 aaKnown RBP16.69■□□□□ 0.26
CHRD-204ENST00000420973 SDR42E1Q8WUS8 393 aa16.69■□□□□ 0.26
CHRD-204ENST00000420973 TRMT1Q9NXH9 659 aaKnown RBP16.69■□□□□ 0.26
CHRD-204ENST00000420973 ZNF652Q9Y2D9 606 aa16.69■□□□□ 0.26
CHRD-204ENST00000420973 PDCP20941 246 aa16.69■□□□□ 0.26
CHRD-204ENST00000420973 IBSPP21815 317 aaPredicted RBP16.69■□□□□ 0.26
CHRD-204ENST00000420973 RASGRF1Q13972 1273 aa16.69■□□□□ 0.26
CHRD-204ENST00000420973 RPAP1Q9BWH6 1393 aaPredicted RBP16.68■□□□□ 0.26
CHRD-204ENST00000420973 EIF5P55010 431 aaKnown RBP16.68■□□□□ 0.26
CHRD-204ENST00000420973 PUM3Q15397 648 aaKnown RBP16.68■□□□□ 0.26
CHRD-204ENST00000420973 SETDB2Q96T68 719 aa16.68■□□□□ 0.26
CHRD-204ENST00000420973 CHRNDQ07001 517 aa16.68■□□□□ 0.26
CHRD-204ENST00000420973 ERCC6LQ2NKX8 1250 aa16.68■□□□□ 0.26
CHRD-204ENST00000420973 ANKRD18AQ8IVF6 992 aa16.68■□□□□ 0.26
CHRD-204ENST00000420973 LINC00116Q8NCU8 138 aa16.68■□□□□ 0.26
CHRD-204ENST00000420973 APPBP2Q92624 585 aa16.68■□□□□ 0.26
CHRD-204ENST00000420973 CCDC34Q96HJ3 373 aa16.68■□□□□ 0.26
CHRD-204ENST00000420973 TM6SF1Q9BZW5 370 aa16.68■□□□□ 0.26
CHRD-204ENST00000420973 HELLSQ9NRZ9 838 aa16.68■□□□□ 0.26
CHRD-204ENST00000420973 PDE6AP16499 860 aa16.68■□□□□ 0.26
CHRD-204ENST00000420973 CYP7A1P22680 504 aa16.68■□□□□ 0.26
CHRD-204ENST00000420973 MAP3K12Q12852 859 aa16.68■□□□□ 0.26
CHRD-204ENST00000420973 SLC24A3Q9HC58 644 aa16.68■□□□□ 0.26
CHRD-204ENST00000420973 MED23Q9ULK4 1368 aa16.67■□□□□ 0.26
CHRD-204ENST00000420973 ME1P48163 572 aa16.67■□□□□ 0.26
CHRD-204ENST00000420973 PTPN14Q15678 1187 aa16.67■□□□□ 0.26
CHRD-204ENST00000420973 MCTP2Q6DN12 878 aa16.67■□□□□ 0.26
CHRD-204ENST00000420973 SPATA5Q8NB90 893 aa16.67■□□□□ 0.26
CHRD-204ENST00000420973 PHKBQ93100 1093 aa16.67■□□□□ 0.26
CHRD-204ENST00000420973 MED4Q9NPJ6 270 aa16.67■□□□□ 0.26
CHRD-204ENST00000420973 ARGLU1Q9NWB6 273 aaPredicted RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms