RNA–Protein interactions for RNA: ENST00000420692.6

CTSB-203, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 2,230 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-203ENST00000420692 TDRD7Q8NHU6 1098 aaKnown RBP18.86■□□□□ 0.61
CTSB-203ENST00000420692 TMEM87BQ96K49 555 aa18.86■□□□□ 0.61
CTSB-203ENST00000420692 NAPBQ9H115 298 aa18.86■□□□□ 0.61
CTSB-203ENST00000420692 TIAM2Q8IVF5 1701 aa18.86■□□□□ 0.61
CTSB-203ENST00000420692 A0A087WWV3 80 aa18.86■□□□□ 0.61
CTSB-203ENST00000420692 UBE2Q2LH0YL09 131 aa18.86■□□□□ 0.61
CTSB-203ENST00000420692 SGMS1Q86VZ5 419 aa18.86■□□□□ 0.61
CTSB-203ENST00000420692 CCDC144CPQ8IYA2 1237 aa18.86■□□□□ 0.61
CTSB-203ENST00000420692 FMR1NBQ8N0W7 255 aaPredicted RBP18.86■□□□□ 0.61
CTSB-203ENST00000420692 C17orf53Q8N3J3 647 aaPredicted RBP18.86■□□□□ 0.61
CTSB-203ENST00000420692 PHKBQ93100 1093 aa18.86■□□□□ 0.61
CTSB-203ENST00000420692 MYL10Q9BUA6 226 aa18.86■□□□□ 0.61
CTSB-203ENST00000420692 BCL2L12Q9HB09 334 aa18.86■□□□□ 0.61
CTSB-203ENST00000420692 PNPLA7Q6ZV29 1317 aa18.86■□□□□ 0.61
CTSB-203ENST00000420692 ZNF831Q5JPB2 1677 aa18.86■□□□□ 0.61
CTSB-203ENST00000420692 RANBP6O60518 1105 aaKnown RBP18.85■□□□□ 0.61
CTSB-203ENST00000420692 ZNF165P49910 485 aa18.85■□□□□ 0.61
CTSB-203ENST00000420692 IQCB1Q15051 598 aa18.85■□□□□ 0.61
CTSB-203ENST00000420692 ADALQ6DHV7 355 aa18.85■□□□□ 0.61
CTSB-203ENST00000420692 C11orf57Q6ZUT1 292 aaPredicted RBP18.85■□□□□ 0.61
CTSB-203ENST00000420692 MIGA1Q8NAN2 632 aa18.85■□□□□ 0.61
CTSB-203ENST00000420692 POLR3EQ9NVU0 708 aa18.85■□□□□ 0.61
CTSB-203ENST00000420692 ZNF804BA4D1E1 1349 aa18.85■□□□□ 0.61
CTSB-203ENST00000420692 COL1A1P02452 1464 aaPredicted RBP18.85■□□□□ 0.61
CTSB-203ENST00000420692 KIAA2012Q0VF49 1180 aa18.85■□□□□ 0.61
CTSB-203ENST00000420692 SF3B3Q15393 1217 aaKnown RBP18.85■□□□□ 0.61
CTSB-203ENST00000420692 MICU3Q86XE3 530 aa18.85■□□□□ 0.61
CTSB-203ENST00000420692 SPC24Q8NBT2 197 aa18.85■□□□□ 0.61
CTSB-203ENST00000420692 GYG1P46976 350 aa18.84■□□□□ 0.61
CTSB-203ENST00000420692 TMEM67Q5HYA8 995 aa18.84■□□□□ 0.61
CTSB-203ENST00000420692 AKNAD1Q5T1N1 836 aa18.84■□□□□ 0.61
CTSB-203ENST00000420692 CCDC73Q6ZRK6 1079 aa18.84■□□□□ 0.61
CTSB-203ENST00000420692 BRAPQ7Z569 592 aa18.84■□□□□ 0.61
CTSB-203ENST00000420692 ZNF652Q9Y2D9 606 aa18.84■□□□□ 0.61
CTSB-203ENST00000420692 R3HCC1Q9Y3T6 440 aaKnown RBP18.84■□□□□ 0.61
CTSB-203ENST00000420692 SLC4A4Q9Y6R1 1079 aa18.84■□□□□ 0.61
CTSB-203ENST00000420692 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.84■□□□□ 0.61
CTSB-203ENST00000420692 A0A1B0GVL5 298 aa18.84■□□□□ 0.61
CTSB-203ENST00000420692 A0A1W2PQ27 194 aa18.84■□□□□ 0.61
CTSB-203ENST00000420692 A0A1W2PQ64 194 aa18.84■□□□□ 0.61
CTSB-203ENST00000420692 A0A1W2PQD8 194 aa18.84■□□□□ 0.61
CTSB-203ENST00000420692 SMIM22K7EJ46 135 aa18.84■□□□□ 0.61
CTSB-203ENST00000420692 ZBTB43O43298 467 aa18.84■□□□□ 0.61
CTSB-203ENST00000420692 LIFRP42702 1097 aa18.84■□□□□ 0.61
CTSB-203ENST00000420692 PIP4K2BP78356 416 aa18.84■□□□□ 0.61
CTSB-203ENST00000420692 PIBF1Q8WXW3 757 aa18.84■□□□□ 0.61
CTSB-203ENST00000420692 ERCC4Q92889 916 aaPredicted RBP18.84■□□□□ 0.61
CTSB-203ENST00000420692 ALG1Q9BT22 464 aa18.84■□□□□ 0.61
CTSB-203ENST00000420692 CTAGE5O15320 804 aa18.83■□□□□ 0.6
CTSB-203ENST00000420692 YEATS4O95619 227 aa18.83■□□□□ 0.6
CTSB-203ENST00000420692 NDUFA8P51970 172 aa18.83■□□□□ 0.6
CTSB-203ENST00000420692 AXDND1Q5T1B0 1012 aaPredicted RBP18.83■□□□□ 0.6
CTSB-203ENST00000420692 PLA2G4DQ86XP0 818 aa18.83■□□□□ 0.6
CTSB-203ENST00000420692 MRPS27Q92552 414 aaKnown RBP18.83■□□□□ 0.6
CTSB-203ENST00000420692 TBC1D9BQ66K14 1250 aa18.82■□□□□ 0.6
CTSB-203ENST00000420692 KRT40Q6A162 431 aa18.82■□□□□ 0.6
CTSB-203ENST00000420692 RGS22Q8NE09 1264 aa18.82■□□□□ 0.6
CTSB-203ENST00000420692 CDC5LQ99459 802 aaKnown RBP18.82■□□□□ 0.6
CTSB-203ENST00000420692 LRP2BPQ9P2M1 347 aa18.82■□□□□ 0.6
CTSB-203ENST00000420692 SPTLC2O15270 562 aa18.82■□□□□ 0.6
CTSB-203ENST00000420692 STK38Q15208 465 aa18.82■□□□□ 0.6
CTSB-203ENST00000420692 STAG1Q8WVM7 1258 aa18.82■□□□□ 0.6
CTSB-203ENST00000420692 MINPP1Q9UNW1 487 aa18.82■□□□□ 0.6
CTSB-203ENST00000420692 CACNA1SQ13698 1873 aa18.82■□□□□ 0.6
CTSB-203ENST00000420692 IFIT3O14879 490 aaKnown RBP18.81■□□□□ 0.6
CTSB-203ENST00000420692 KINO60870 393 aaKnown RBP18.81■□□□□ 0.6
CTSB-203ENST00000420692 ZNF75DP51815 510 aa18.81■□□□□ 0.6
CTSB-203ENST00000420692 ANO1Q5XXA6 986 aa18.81■□□□□ 0.6
CTSB-203ENST00000420692 MFSD6Q6ZSS7 791 aa18.81■□□□□ 0.6
CTSB-203ENST00000420692 ZNF384Q8TF68 577 aa18.81■□□□□ 0.6
CTSB-203ENST00000420692 CELF1Q92879 486 aaKnown RBP18.81■□□□□ 0.6
CTSB-203ENST00000420692 BSDC1Q9NW68 430 aaPredicted RBP18.81■□□□□ 0.6
CTSB-203ENST00000420692 PYCARDQ9ULZ3 195 aa18.81■□□□□ 0.6
CTSB-203ENST00000420692 WDHD1O75717 1129 aaPredicted RBP18.81■□□□□ 0.6
CTSB-203ENST00000420692 GNAT2P19087 354 aa18.81■□□□□ 0.6
CTSB-203ENST00000420692 CYP7A1P22680 504 aa18.81■□□□□ 0.6
CTSB-203ENST00000420692 NOLC1Q14978 699 aaKnown RBP eCLIP18.81■□□□□ 0.64e-15■□□□□ 10.7
CTSB-203ENST00000420692 SLC10A5Q5PT55 438 aa18.81■□□□□ 0.6
CTSB-203ENST00000420692 NFXL1Q6ZNB6 911 aa18.81■□□□□ 0.6
CTSB-203ENST00000420692 BICDL1Q6ZP65 573 aa18.81■□□□□ 0.6
CTSB-203ENST00000420692 ANKRD18AQ8IVF6 992 aa18.81■□□□□ 0.6
CTSB-203ENST00000420692 KCNG4Q8TDN1 519 aa18.81■□□□□ 0.6
CTSB-203ENST00000420692 ZKSCAN3Q9BRR0 538 aa18.81■□□□□ 0.6
CTSB-203ENST00000420692 GOLGA8AA7E2F4 631 aa18.8■□□□□ 0.6
CTSB-203ENST00000420692 TDO2P48775 406 aa18.8■□□□□ 0.6
CTSB-203ENST00000420692 TERF1P54274 439 aa18.8■□□□□ 0.6
CTSB-203ENST00000420692 VPS37DQ86XT2 251 aa18.8■□□□□ 0.6
CTSB-203ENST00000420692 STK11IPQ8N1F8 1099 aa18.8■□□□□ 0.6
CTSB-203ENST00000420692 CNTNAP4Q9C0A0 1308 aa18.8■□□□□ 0.6
CTSB-203ENST00000420692 TPM2P07951 284 aa18.8■□□□□ 0.6
CTSB-203ENST00000420692 UBE4AQ14139 1066 aa18.8■□□□□ 0.6
CTSB-203ENST00000420692 STX1AQ16623 288 aa18.8■□□□□ 0.6
CTSB-203ENST00000420692 SDR42E1Q8WUS8 393 aa18.8■□□□□ 0.6
CTSB-203ENST00000420692 FAM84BQ96KN1 310 aaPredicted RBP18.8■□□□□ 0.6
CTSB-203ENST00000420692 KRT23Q9C075 422 aa18.8■□□□□ 0.6
CTSB-203ENST00000420692 CNNM2Q9H8M5 875 aa18.8■□□□□ 0.6
CTSB-203ENST00000420692 SPTLC3Q9NUV7 552 aa18.8■□□□□ 0.6
CTSB-203ENST00000420692 SRP68Q9UHB9 627 aaKnown RBP18.8■□□□□ 0.6
CTSB-203ENST00000420692 NRBP1Q9UHY1 535 aa18.8■□□□□ 0.6
CTSB-203ENST00000420692 CDKL5O76039 1030 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms