RNA–Protein interactions for RNA: ENST00000416690.5

GTF3C3-203, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 326 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-203ENST00000416690 ATP2B4P23634 1241 aa3.46□□□□□ -1.86
GTF3C3-203ENST00000416690 CD96P40200 585 aa3.46□□□□□ -1.86
GTF3C3-203ENST00000416690 ALKBH2Q6NS38 261 aa3.46□□□□□ -1.86
GTF3C3-203ENST00000416690 FAM181AQ8N9Y4 354 aa3.46□□□□□ -1.86
GTF3C3-203ENST00000416690 CORO1BQ9BR76 489 aa3.46□□□□□ -1.86
GTF3C3-203ENST00000416690 TRIM56Q9BRZ2 755 aaKnown RBP3.46□□□□□ -1.86
GTF3C3-203ENST00000416690 ZFYVE28Q9HCC9 887 aa3.46□□□□□ -1.86
GTF3C3-203ENST00000416690 FAM53CQ9NYF3 392 aa3.46□□□□□ -1.86
GTF3C3-203ENST00000416690 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.46□□□□□ -1.86
GTF3C3-203ENST00000416690 AMOTL2Q9Y2J4 779 aa3.46□□□□□ -1.86
GTF3C3-203ENST00000416690 SYNGAP1Q96PV0 1343 aa3.45□□□□□ -1.86
GTF3C3-203ENST00000416690 FAM87AP0C7U9 286 aa3.45□□□□□ -1.86
GTF3C3-203ENST00000416690 MPSTP25325 297 aa3.45□□□□□ -1.86
GTF3C3-203ENST00000416690 CFPP27918 469 aa3.45□□□□□ -1.86
GTF3C3-203ENST00000416690 RAP1GAPP47736 663 aa3.45□□□□□ -1.86
GTF3C3-203ENST00000416690 GRIA4P48058 902 aa3.45□□□□□ -1.86
GTF3C3-203ENST00000416690 EHHADHQ08426 723 aa3.45□□□□□ -1.86
GTF3C3-203ENST00000416690 IFI16Q16666 785 aaKnown RBP3.45□□□□□ -1.86
GTF3C3-203ENST00000416690 AOC3Q16853 763 aa3.45□□□□□ -1.86
GTF3C3-203ENST00000416690 SPRED3Q2MJR0 410 aa3.45□□□□□ -1.86
GTF3C3-203ENST00000416690 LILRA6Q6PI73 481 aa3.45□□□□□ -1.86
GTF3C3-203ENST00000416690 CCNJLQ8IV13 435 aa3.45□□□□□ -1.86
GTF3C3-203ENST00000416690 TOX2Q96NM4 488 aa3.45□□□□□ -1.86
GTF3C3-203ENST00000416690 TCF12Q99081 682 aa3.45□□□□□ -1.86
GTF3C3-203ENST00000416690 WDR18Q9BV38 432 aa3.45□□□□□ -1.86
GTF3C3-203ENST00000416690 MKNK2Q9HBH9 465 aa3.45□□□□□ -1.86
GTF3C3-203ENST00000416690 PPP1R9AQ9ULJ8 1098 aa3.45□□□□□ -1.86
GTF3C3-203ENST00000416690 U3KQE9 123 aa3.45□□□□□ -1.86
GTF3C3-203ENST00000416690 A0A1W2PP55 124 aa3.44□□□□□ -1.86
GTF3C3-203ENST00000416690 ZNF503-AS2A6NEH8 195 aa3.44□□□□□ -1.86
GTF3C3-203ENST00000416690 PRRG2O14669 202 aa3.44□□□□□ -1.86
GTF3C3-203ENST00000416690 POLR3DP05423 398 aaPredicted RBP3.44□□□□□ -1.86
GTF3C3-203ENST00000416690 USP5P45974 858 aa3.44□□□□□ -1.86
GTF3C3-203ENST00000416690 CDK5R2Q13319 367 aa3.44□□□□□ -1.86
GTF3C3-203ENST00000416690 MLANAQ16655 118 aa3.44□□□□□ -1.86
GTF3C3-203ENST00000416690 SLC23A3Q6PIS1 610 aa3.44□□□□□ -1.86
GTF3C3-203ENST00000416690 LCNL1Q6ZST4 164 aa3.44□□□□□ -1.86
GTF3C3-203ENST00000416690 ZSWIM9Q86XI8 627 aa3.44□□□□□ -1.86
GTF3C3-203ENST00000416690 C1QL4Q86Z23 238 aa3.44□□□□□ -1.86
GTF3C3-203ENST00000416690 SIAH1Q8IUQ4 282 aa3.44□□□□□ -1.86
GTF3C3-203ENST00000416690 FLAD1Q8NFF5 587 aa3.44□□□□□ -1.86
GTF3C3-203ENST00000416690 ZSCAN18Q8TBC5 510 aaPredicted RBP3.44□□□□□ -1.86
GTF3C3-203ENST00000416690 DDX54Q8TDD1 881 aaKnown RBP3.44□□□□□ -1.86
GTF3C3-203ENST00000416690 LIN7BQ9HAP6 207 aa3.44□□□□□ -1.86
GTF3C3-203ENST00000416690 CRIM1Q9NZV1 1036 aa3.44□□□□□ -1.86
GTF3C3-203ENST00000416690 NCANO14594 1321 aa3.44□□□□□ -1.86
GTF3C3-203ENST00000416690 TMEM265A0A087WTH1 108 aa3.43□□□□□ -1.86
GTF3C3-203ENST00000416690 TMPRSS2O15393 492 aa3.43□□□□□ -1.86
GTF3C3-203ENST00000416690 B3GALT4O96024 378 aa3.43□□□□□ -1.86
GTF3C3-203ENST00000416690 CEACAM5P06731 702 aa3.43□□□□□ -1.86
GTF3C3-203ENST00000416690 OXCT1P55809 520 aa3.43□□□□□ -1.86
GTF3C3-203ENST00000416690 AAMPQ13685 434 aa3.43□□□□□ -1.86
GTF3C3-203ENST00000416690 PDE3AQ14432 1141 aa3.43□□□□□ -1.86
GTF3C3-203ENST00000416690 ANGEL2Q5VTE6 544 aaKnown RBP3.43□□□□□ -1.86
GTF3C3-203ENST00000416690 GALNT12Q8IXK2 581 aa3.43□□□□□ -1.86
GTF3C3-203ENST00000416690 GTF3C2Q8WUA4 911 aaPredicted RBP3.43□□□□□ -1.86
GTF3C3-203ENST00000416690 HRASLS5Q96KN8 279 aa3.43□□□□□ -1.86
GTF3C3-203ENST00000416690 PLAGL2Q9UPG8 496 aa3.43□□□□□ -1.86
GTF3C3-203ENST00000416690 B8ZZF3 427 aa3.42□□□□□ -1.86
GTF3C3-203ENST00000416690 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.42□□□□□ -1.86
GTF3C3-203ENST00000416690 LEFTY1O75610 366 aa3.42□□□□□ -1.86
GTF3C3-203ENST00000416690 TSPAN15O95858 294 aa3.42□□□□□ -1.86
GTF3C3-203ENST00000416690 PRKCSHP14314 528 aaPredicted RBP3.42□□□□□ -1.86
GTF3C3-203ENST00000416690 NPR3P17342 541 aa3.42□□□□□ -1.86
GTF3C3-203ENST00000416690 LIG1P18858 919 aa3.42□□□□□ -1.86
GTF3C3-203ENST00000416690 KCNMB1Q16558 191 aa3.42□□□□□ -1.86
GTF3C3-203ENST00000416690 ARHGAP27Q6ZUM4 889 aa3.42□□□□□ -1.86
GTF3C3-203ENST00000416690 LRRC56Q8IYG6 542 aaPredicted RBP3.42□□□□□ -1.86
GTF3C3-203ENST00000416690 WDR89Q96FK6 387 aaPredicted RBP3.42□□□□□ -1.86
GTF3C3-203ENST00000416690 FANCD2OSQ96PS1 177 aa3.42□□□□□ -1.86
GTF3C3-203ENST00000416690 PPP1R16BQ96T49 567 aa3.42□□□□□ -1.86
GTF3C3-203ENST00000416690 ATXN3LQ9H3M9 355 aa3.42□□□□□ -1.86
GTF3C3-203ENST00000416690 PIDD1Q9HB75 910 aa3.42□□□□□ -1.86
GTF3C3-203ENST00000416690 SNX11Q9Y5W9 270 aa3.42□□□□□ -1.86
GTF3C3-203ENST00000416690 FZD6O60353 706 aa3.41□□□□□ -1.86
GTF3C3-203ENST00000416690 SLFN14P0C7P3 912 aa3.41□□□□□ -1.86
GTF3C3-203ENST00000416690 ZSCAN22P10073 491 aaPredicted RBP3.41□□□□□ -1.86
GTF3C3-203ENST00000416690 ITPKAP23677 461 aa3.41□□□□□ -1.86
GTF3C3-203ENST00000416690 AP3B2Q13367 1082 aa3.41□□□□□ -1.86
GTF3C3-203ENST00000416690 MTMR3Q13615 1198 aa3.41□□□□□ -1.86
GTF3C3-203ENST00000416690 ECM1Q16610 540 aa3.41□□□□□ -1.86
GTF3C3-203ENST00000416690 KIAA0319Q5VV43 1072 aa3.41□□□□□ -1.86
GTF3C3-203ENST00000416690 TTLL10Q6ZVT0 673 aa3.41□□□□□ -1.86
GTF3C3-203ENST00000416690 SYDE1Q6ZW31 735 aaPredicted RBP3.41□□□□□ -1.86
GTF3C3-203ENST00000416690 ANKLE2Q86XL3 938 aa3.41□□□□□ -1.86
GTF3C3-203ENST00000416690 SMYD4Q8IYR2 804 aaPredicted RBP3.41□□□□□ -1.86
GTF3C3-203ENST00000416690 LIN37Q96GY3 246 aaPredicted RBP3.41□□□□□ -1.86
GTF3C3-203ENST00000416690 DUSP23Q9BVJ7 150 aa3.41□□□□□ -1.86
GTF3C3-203ENST00000416690 TNKS2Q9H2K2 1166 aa3.41□□□□□ -1.86
GTF3C3-203ENST00000416690 ZNF576Q9H609 170 aa3.41□□□□□ -1.86
GTF3C3-203ENST00000416690 PRDM7Q9NQW5 492 aa3.41□□□□□ -1.86
GTF3C3-203ENST00000416690 DISC1Q9NRI5 854 aa3.41□□□□□ -1.86
GTF3C3-203ENST00000416690 PCOLCE2Q9UKZ9 415 aa3.41□□□□□ -1.86
GTF3C3-203ENST00000416690 RNGTTO60942 597 aaKnown RBP3.4□□□□□ -1.87
GTF3C3-203ENST00000416690 FAM13AO94988 1023 aa3.4□□□□□ -1.87
GTF3C3-203ENST00000416690 KRT1P04264 644 aa3.4□□□□□ -1.87
GTF3C3-203ENST00000416690 ID3Q02535 119 aa3.4□□□□□ -1.87
GTF3C3-203ENST00000416690 TTLL4Q14679 1199 aa3.4□□□□□ -1.87
GTF3C3-203ENST00000416690 PRR23BQ6ZRT6 265 aa3.4□□□□□ -1.87
GTF3C3-203ENST00000416690 GJD3Q8N144 294 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms