RNA–Protein interactions for RNA: ENST00000413296.1

CBX1P3-201, Transcript of chromobox 1 pseudogene 3, humanhuman

BASIC

Gene CBX1P3, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P3-201ENST00000413296 FAM133BQ5BKY9 247 aaKnown RBP7.11□□□□□ -1.27
CBX1P3-201ENST00000413296 TBCELQ5QJ74 424 aa7.11□□□□□ -1.27
CBX1P3-201ENST00000413296 SNAP47Q5SQN1 464 aa7.11□□□□□ -1.27
CBX1P3-201ENST00000413296 FBXW10Q5XX13 1052 aa7.11□□□□□ -1.27
CBX1P3-201ENST00000413296 CFAP161Q6P656 301 aa7.11□□□□□ -1.27
CBX1P3-201ENST00000413296 C1orf228Q6PIY5 440 aa7.11□□□□□ -1.27
CBX1P3-201ENST00000413296 BRICD5Q6PL45 260 aa7.11□□□□□ -1.27
CBX1P3-201ENST00000413296 SLC9A9Q8IVB4 645 aa7.11□□□□□ -1.27
CBX1P3-201ENST00000413296 FTSJ3Q8IY81 847 aaKnown RBP7.11□□□□□ -1.27
CBX1P3-201ENST00000413296 GJA10Q969M2 543 aa7.11□□□□□ -1.27
CBX1P3-201ENST00000413296 SLC26A8Q96RN1 970 aa7.11□□□□□ -1.27
CBX1P3-201ENST00000413296 TARS2Q9BW92 718 aaKnown RBP7.11□□□□□ -1.27
CBX1P3-201ENST00000413296 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.11□□□□□ -1.27
CBX1P3-201ENST00000413296 TNKS2Q9H2K2 1166 aa7.11□□□□□ -1.27
CBX1P3-201ENST00000413296 CNNM2Q9H8M5 875 aa7.11□□□□□ -1.27
CBX1P3-201ENST00000413296 LUC7LQ9NQ29 371 aaKnown RBP7.11□□□□□ -1.27
CBX1P3-201ENST00000413296 KIAA1468Q9P260 1216 aa7.11□□□□□ -1.27
CBX1P3-201ENST00000413296 GTF2IRD1Q9UHL9 959 aa7.11□□□□□ -1.27
CBX1P3-201ENST00000413296 CHMP3Q9Y3E7 222 aa7.11□□□□□ -1.27
CBX1P3-201ENST00000413296 HCN4Q9Y3Q4 1203 aa7.11□□□□□ -1.27
CBX1P3-201ENST00000413296 SALL2Q9Y467 1007 aaPredicted RBP7.11□□□□□ -1.27
CBX1P3-201ENST00000413296 DNAJC25-GNG10A0A024R161 153 aa7.1□□□□□ -1.27
CBX1P3-201ENST00000413296 APAF1O14727 1248 aa7.1□□□□□ -1.27
CBX1P3-201ENST00000413296 GADD45BO75293 160 aaPredicted RBP7.1□□□□□ -1.27
CBX1P3-201ENST00000413296 MICAL2O94851 1124 aa7.1□□□□□ -1.27
CBX1P3-201ENST00000413296 RPN1P04843 607 aaKnown RBP7.1□□□□□ -1.27
CBX1P3-201ENST00000413296 PGRP06401 933 aa7.1□□□□□ -1.27
CBX1P3-201ENST00000413296 FAM200BP0CF97 657 aa7.1□□□□□ -1.27
CBX1P3-201ENST00000413296 CRKP46108 304 aa7.1□□□□□ -1.27
CBX1P3-201ENST00000413296 FOXK2Q01167 660 aa7.1□□□□□ -1.27
CBX1P3-201ENST00000413296 MAP3K10Q02779 954 aa7.1□□□□□ -1.27
CBX1P3-201ENST00000413296 STK3Q13188 491 aa7.1□□□□□ -1.27
CBX1P3-201ENST00000413296 DGKZQ13574 1117 aa7.1□□□□□ -1.27
CBX1P3-201ENST00000413296 LONRF2Q1L5Z9 754 aa7.1□□□□□ -1.27
CBX1P3-201ENST00000413296 CNNM4Q6P4Q7 775 aa7.1□□□□□ -1.27
CBX1P3-201ENST00000413296 MZT2AQ6P582 158 aa7.1□□□□□ -1.27
CBX1P3-201ENST00000413296 MAATS1Q7Z4T9 603 aa7.1□□□□□ -1.27
CBX1P3-201ENST00000413296 NBPF11Q86T75 865 aa7.1□□□□□ -1.27
CBX1P3-201ENST00000413296 RASSF3Q86WH2 238 aa7.1□□□□□ -1.27
CBX1P3-201ENST00000413296 GOLM1Q8NBJ4 401 aa7.1□□□□□ -1.27
CBX1P3-201ENST00000413296 USP33Q8TEY7 942 aa7.1□□□□□ -1.27
CBX1P3-201ENST00000413296 RSPH1Q8WYR4 309 aa7.1□□□□□ -1.27
CBX1P3-201ENST00000413296 SLC10A4Q96EP9 437 aa7.1□□□□□ -1.27
CBX1P3-201ENST00000413296 IFT43Q96FT9 208 aa7.1□□□□□ -1.27
CBX1P3-201ENST00000413296 NGLY1Q96IV0 654 aa7.1□□□□□ -1.27
CBX1P3-201ENST00000413296 FERD3LQ96RJ6 166 aa7.1□□□□□ -1.27
CBX1P3-201ENST00000413296 SERINC2Q96SA4 455 aa7.1□□□□□ -1.27
CBX1P3-201ENST00000413296 RUSC1Q9BVN2 902 aa7.1□□□□□ -1.27
CBX1P3-201ENST00000413296 ESF1Q9H501 851 aaKnown RBP7.1□□□□□ -1.27
CBX1P3-201ENST00000413296 NPHS2Q9NP85 383 aa7.1□□□□□ -1.27
CBX1P3-201ENST00000413296 FOXD3Q9UJU5 478 aaPredicted RBP7.1□□□□□ -1.27
CBX1P3-201ENST00000413296 DIS3Q9Y2L1 958 aaKnown RBP7.1□□□□□ -1.27
CBX1P3-201ENST00000413296 MAP4K5Q9Y4K4 846 aa7.1□□□□□ -1.27
CBX1P3-201ENST00000413296 DGKBQ9Y6T7 804 aa7.1□□□□□ -1.27
CBX1P3-201ENST00000413296 hCG_1984214I3L0E3 225 aa7.09□□□□□ -1.27
CBX1P3-201ENST00000413296 RHOBTB3O94955 611 aa7.09□□□□□ -1.27
CBX1P3-201ENST00000413296 PF4P02776 101 aa7.09□□□□□ -1.27
CBX1P3-201ENST00000413296 INHAP05111 366 aa7.09□□□□□ -1.27
CBX1P3-201ENST00000413296 TNFAIP3P21580 790 aa7.09□□□□□ -1.27
CBX1P3-201ENST00000413296 RENBPP51606 427 aa7.09□□□□□ -1.27
CBX1P3-201ENST00000413296 MAP3K11Q16584 847 aa7.09□□□□□ -1.27
CBX1P3-201ENST00000413296 MINDY4Q4G0A6 757 aa7.09□□□□□ -1.27
CBX1P3-201ENST00000413296 ZC3H12BQ5HYM0 836 aaKnown RBP7.09□□□□□ -1.27
CBX1P3-201ENST00000413296 MSL1Q68DK7 614 aa7.09□□□□□ -1.27
CBX1P3-201ENST00000413296 LVRNQ6Q4G3 990 aa7.09□□□□□ -1.27
CBX1P3-201ENST00000413296 ANKRD13DQ6ZTN6 518 aa7.09□□□□□ -1.27
CBX1P3-201ENST00000413296 SH3RF1Q7Z6J0 888 aa7.09□□□□□ -1.27
CBX1P3-201ENST00000413296 PHC3Q8NDX5 983 aa7.09□□□□□ -1.27
CBX1P3-201ENST00000413296 CDK5RAP3Q96JB5 506 aa7.09□□□□□ -1.27
CBX1P3-201ENST00000413296 KIF2CQ99661 725 aa7.09□□□□□ -1.27
CBX1P3-201ENST00000413296 PUS7LQ9H0K6 701 aaKnown RBP7.09□□□□□ -1.27
CBX1P3-201ENST00000413296 SCHIP1Q9P0W5 487 aaPredicted RBP7.09□□□□□ -1.27
CBX1P3-201ENST00000413296 IP6K2Q9UHH9 426 aa7.09□□□□□ -1.27
CBX1P3-201ENST00000413296 ISY1Q9ULR0 285 aaKnown RBP7.09□□□□□ -1.27
CBX1P3-201ENST00000413296 COLQQ9Y215 455 aaPredicted RBP7.09□□□□□ -1.27
CBX1P3-201ENST00000413296 GPR39O43194 453 aa7.08□□□□□ -1.28
CBX1P3-201ENST00000413296 ACTN4O43707 911 aaKnown RBP7.08□□□□□ -1.28
CBX1P3-201ENST00000413296 SNX2O60749 519 aa7.08□□□□□ -1.28
CBX1P3-201ENST00000413296 STAU1O95793 577 aaKnown RBP7.08□□□□□ -1.28
CBX1P3-201ENST00000413296 TGFB3P10600 412 aa7.08□□□□□ -1.28
CBX1P3-201ENST00000413296 SCTRP47872 440 aa7.08□□□□□ -1.28
CBX1P3-201ENST00000413296 EIF5P55010 431 aaKnown RBP7.08□□□□□ -1.28
CBX1P3-201ENST00000413296 NUCB1Q02818 461 aa7.08□□□□□ -1.28
CBX1P3-201ENST00000413296 STRN3Q13033 797 aa7.08□□□□□ -1.28
CBX1P3-201ENST00000413296 SEZ6Q53EL9 994 aa7.08□□□□□ -1.28
CBX1P3-201ENST00000413296 DACT2Q5SW24 774 aa7.08□□□□□ -1.28
CBX1P3-201ENST00000413296 LHFPL2Q6ZUX7 228 aa7.08□□□□□ -1.28
CBX1P3-201ENST00000413296 MSL3Q8N5Y2 521 aaKnown RBP7.08□□□□□ -1.28
CBX1P3-201ENST00000413296 LEO1Q8WVC0 666 aaPredicted RBP7.08□□□□□ -1.28
CBX1P3-201ENST00000413296 TRIM52Q96A61 297 aa7.08□□□□□ -1.28
CBX1P3-201ENST00000413296 PGBD4Q96DM1 585 aa7.08□□□□□ -1.28
CBX1P3-201ENST00000413296 SLC4A9Q96Q91 983 aa7.08□□□□□ -1.28
CBX1P3-201ENST00000413296 SPATA9Q9BWV2 254 aa7.08□□□□□ -1.28
CBX1P3-201ENST00000413296 ZFYVE28Q9HCC9 887 aa7.08□□□□□ -1.28
CBX1P3-201ENST00000413296 PGAP2Q9UHJ9 254 aa7.08□□□□□ -1.28
CBX1P3-201ENST00000413296 TRHDEQ9UKU6 1024 aa7.08□□□□□ -1.28
CBX1P3-201ENST00000413296 PHTF1Q9UMS5 762 aa7.08□□□□□ -1.28
CBX1P3-201ENST00000413296 FAM50BQ9Y247 325 aa7.08□□□□□ -1.28
CBX1P3-201ENST00000413296 B2RBV5 119 aa7.07□□□□□ -1.28
CBX1P3-201ENST00000413296 RNF40O75150 1001 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms