RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 STK17AQ9UEE5 414 aa7.92□□□□□ -1.14
LSM5-206ENST00000409987 EFR3BQ9Y2G0 817 aa7.92□□□□□ -1.14
LSM5-206ENST00000409987 DEAF1O75398 565 aaPredicted RBP7.91□□□□□ -1.14
LSM5-206ENST00000409987 CTSBP07858 339 aa7.91□□□□□ -1.14
LSM5-206ENST00000409987 GTF2F1P35269 517 aaKnown RBP eCLIP7.91□□□□□ -1.14
LSM5-206ENST00000409987 NASPP49321 788 aaPredicted RBP7.91□□□□□ -1.14
LSM5-206ENST00000409987 MAP1SQ66K74 1059 aaPredicted RBP7.91□□□□□ -1.14
LSM5-206ENST00000409987 SLITRK4Q8IW52 837 aa7.91□□□□□ -1.14
LSM5-206ENST00000409987 SPATA32Q96LK8 384 aa7.91□□□□□ -1.14
LSM5-206ENST00000409987 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.91□□□□□ -1.14
LSM5-206ENST00000409987 LRRC3Q9BY71 257 aa7.91□□□□□ -1.14
LSM5-206ENST00000409987 ZC3H12CQ9C0D7 883 aaKnown RBP7.91□□□□□ -1.14
LSM5-206ENST00000409987 ROBO2Q9HCK4 1378 aa7.9□□□□□ -1.14
LSM5-206ENST00000409987 ADAM11O75078 769 aa7.9□□□□□ -1.14
LSM5-206ENST00000409987 CILPO75339 1184 aa7.9□□□□□ -1.14
LSM5-206ENST00000409987 TRIM37O94972 964 aa7.9□□□□□ -1.14
LSM5-206ENST00000409987 MAOBP27338 520 aa7.9□□□□□ -1.14
LSM5-206ENST00000409987 SOX9P48436 509 aa7.9□□□□□ -1.14
LSM5-206ENST00000409987 POU4F3Q15319 338 aa7.9□□□□□ -1.14
LSM5-206ENST00000409987 SCARA3Q6AZY7 606 aa7.9□□□□□ -1.14
LSM5-206ENST00000409987 KLHL23Q8NBE8 558 aa7.9□□□□□ -1.14
LSM5-206ENST00000409987 KCNB2Q92953 911 aa7.9□□□□□ -1.14
LSM5-206ENST00000409987 NKD1Q969G9 470 aa7.9□□□□□ -1.14
LSM5-206ENST00000409987 CCDC86Q9H6F5 360 aaKnown RBP7.9□□□□□ -1.14
LSM5-206ENST00000409987 DDX3YO15523 660 aaKnown RBP7.89□□□□□ -1.15
LSM5-206ENST00000409987 CYP11A1P05108 521 aa7.89□□□□□ -1.15
LSM5-206ENST00000409987 SELPP16109 830 aa7.89□□□□□ -1.15
LSM5-206ENST00000409987 NLRP12P59046 1061 aa7.89□□□□□ -1.15
LSM5-206ENST00000409987 MPP2Q14168 576 aa7.89□□□□□ -1.15
LSM5-206ENST00000409987 SUZ12Q15022 739 aaKnown RBP7.89□□□□□ -1.15
LSM5-206ENST00000409987 SEZ6Q53EL9 994 aa7.89□□□□□ -1.15
LSM5-206ENST00000409987 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.89□□□□□ -1.15
LSM5-206ENST00000409987 GPBAR1Q8TDU6 330 aa7.89□□□□□ -1.15
LSM5-206ENST00000409987 ARMC5Q96C12 935 aa7.89□□□□□ -1.15
LSM5-206ENST00000409987 DNAJC2Q99543 621 aaKnown RBP7.89□□□□□ -1.15
LSM5-206ENST00000409987 CORO1BQ9BR76 489 aa7.89□□□□□ -1.15
LSM5-206ENST00000409987 EIF4EBP3O60516 100 aaPredicted RBP7.88□□□□□ -1.15
LSM5-206ENST00000409987 COL9A2Q14055 689 aaPredicted RBP7.88□□□□□ -1.15
LSM5-206ENST00000409987 FOXD4L6Q3SYB3 417 aaPredicted RBP7.88□□□□□ -1.15
LSM5-206ENST00000409987 FOXD4L3Q6VB84 417 aaPredicted RBP7.88□□□□□ -1.15
LSM5-206ENST00000409987 MAP4K3Q8IVH8 894 aa7.88□□□□□ -1.15
LSM5-206ENST00000409987 NEDD1Q8NHV4 660 aa7.88□□□□□ -1.15
LSM5-206ENST00000409987 RRAGCQ9HB90 399 aa7.88□□□□□ -1.15
LSM5-206ENST00000409987 KCNK4Q9NYG8 393 aa7.88□□□□□ -1.15
LSM5-206ENST00000409987 LOC100289279A0A1B0GTE1 492 aa7.87□□□□□ -1.15
LSM5-206ENST00000409987 ZNF862O60290 1169 aa7.87□□□□□ -1.15
LSM5-206ENST00000409987 CDK8P49336 464 aa7.87□□□□□ -1.15
LSM5-206ENST00000409987 REC114Q7Z4M0 266 aa7.87□□□□□ -1.15
LSM5-206ENST00000409987 SVOPQ8N4V2 548 aa7.87□□□□□ -1.15
LSM5-206ENST00000409987 DTWD1Q8N5C7 304 aa7.87□□□□□ -1.15
LSM5-206ENST00000409987 TRIM11Q96F44 468 aa7.87□□□□□ -1.15
LSM5-206ENST00000409987 USP26Q9BXU7 913 aa7.87□□□□□ -1.15
LSM5-206ENST00000409987 KRT82Q9NSB4 513 aa7.87□□□□□ -1.15
LSM5-206ENST00000409987 ARHGEF15O94989 841 aa7.86□□□□□ -1.15
LSM5-206ENST00000409987 DLGAP3O95886 979 aa7.86□□□□□ -1.15
LSM5-206ENST00000409987 CD68P34810 354 aaPredicted RBP7.86□□□□□ -1.15
LSM5-206ENST00000409987 SNRPNP63162 240 aaKnown RBP7.86□□□□□ -1.15
LSM5-206ENST00000409987 RPL6Q02878 288 aaKnown RBP7.86□□□□□ -1.15
LSM5-206ENST00000409987 CWF19L2Q2TBE0 894 aaKnown RBP7.86□□□□□ -1.15
LSM5-206ENST00000409987 TRAPPC3LQ5T215 181 aa7.86□□□□□ -1.15
LSM5-206ENST00000409987 LINC00114Q6XXX2 140 aa7.86□□□□□ -1.15
LSM5-206ENST00000409987 WDR89Q96FK6 387 aaPredicted RBP7.86□□□□□ -1.15
LSM5-206ENST00000409987 BRMS1Q9HCU9 246 aa7.86□□□□□ -1.15
LSM5-206ENST00000409987 PCDHA4Q9UN74 947 aa7.86□□□□□ -1.15
LSM5-206ENST00000409987 A0A0A0MRY4 1105 aa7.85□□□□□ -1.15
LSM5-206ENST00000409987 BPNT1O95861 308 aa7.85□□□□□ -1.15
LSM5-206ENST00000409987 SSBP05455 408 aaKnown RBP eCLIP7.85□□□□□ -1.15
LSM5-206ENST00000409987 LIG1P18858 919 aa7.85□□□□□ -1.15
LSM5-206ENST00000409987 RBL2Q08999 1139 aa7.85□□□□□ -1.15
LSM5-206ENST00000409987 PDE3AQ14432 1141 aa7.85□□□□□ -1.15
LSM5-206ENST00000409987 FBXO11Q86XK2 927 aa7.85□□□□□ -1.15
LSM5-206ENST00000409987 FMR1NBQ8N0W7 255 aaPredicted RBP7.85□□□□□ -1.15
LSM5-206ENST00000409987 UBASH3BQ8TF42 649 aa7.85□□□□□ -1.15
LSM5-206ENST00000409987 ACSBG1Q96GR2 724 aa7.85□□□□□ -1.15
LSM5-206ENST00000409987 ENAMQ9NRM1 1142 aa7.85□□□□□ -1.15
LSM5-206ENST00000409987 STRIP2Q9ULQ0 834 aa7.85□□□□□ -1.15
LSM5-206ENST00000409987 PPT2Q9UMR5 302 aa7.85□□□□□ -1.15
LSM5-206ENST00000409987 POLR3KQ9Y2Y1 108 aaPredicted RBP7.85□□□□□ -1.15
LSM5-206ENST00000409987 DLL1O00548 723 aa7.84□□□□□ -1.15
LSM5-206ENST00000409987 STK10O94804 968 aaKnown RBP7.84□□□□□ -1.15
LSM5-206ENST00000409987 MCM4P33991 863 aa7.84□□□□□ -1.15
LSM5-206ENST00000409987 INPP5AQ14642 412 aa7.84□□□□□ -1.15
LSM5-206ENST00000409987 LRFN4Q6PJG9 635 aa7.84□□□□□ -1.15
LSM5-206ENST00000409987 CCDC81Q6ZN84 652 aa7.84□□□□□ -1.15
LSM5-206ENST00000409987 ZNF408Q9H9D4 720 aa7.84□□□□□ -1.15
LSM5-206ENST00000409987 GFRA2O00451 464 aa7.83□□□□□ -1.16
LSM5-206ENST00000409987 WISP1O95388 367 aa7.83□□□□□ -1.16
LSM5-206ENST00000409987 ETFBP38117 255 aa7.83□□□□□ -1.16
LSM5-206ENST00000409987 ZNF165P49910 485 aa7.83□□□□□ -1.16
LSM5-206ENST00000409987 CLCQ05315 142 aa7.83□□□□□ -1.16
LSM5-206ENST00000409987 KIF4BQ2VIQ3 1234 aa7.83□□□□□ -1.16
LSM5-206ENST00000409987 WIPI1Q5MNZ9 446 aaPredicted RBP7.83□□□□□ -1.16
LSM5-206ENST00000409987 DIEXFQ68CQ4 756 aaKnown RBP7.83□□□□□ -1.16
LSM5-206ENST00000409987 DPH6Q7L8W6 267 aa7.83□□□□□ -1.16
LSM5-206ENST00000409987 PLPPR2Q96GM1 343 aa7.83□□□□□ -1.16
LSM5-206ENST00000409987 PLVAPQ9BX97 442 aa7.83□□□□□ -1.16
LSM5-206ENST00000409987 SRRTQ9BXP5 876 aaKnown RBP7.83□□□□□ -1.16
LSM5-206ENST00000409987 LNPKQ9C0E8 428 aa7.83□□□□□ -1.16
LSM5-206ENST00000409987 MRVI1Q9Y6F6 885 aa7.83□□□□□ -1.16
LSM5-206ENST00000409987 RAC1P63000 192 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms