RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 NFICP08651 508 aa7.92□□□□□ -1.14
CLK1-203ENST00000409769 RAB6AP20340 208 aa7.92□□□□□ -1.14
CLK1-203ENST00000409769 ADMP35318 185 aa7.92□□□□□ -1.14
CLK1-203ENST00000409769 ASPAP45381 313 aa7.92□□□□□ -1.14
CLK1-203ENST00000409769 USPL1Q5W0Q7 1092 aa7.92□□□□□ -1.14
CLK1-203ENST00000409769 ABI1Q8IZP0 508 aa7.92□□□□□ -1.14
CLK1-203ENST00000409769 AOC2O75106 756 aa7.91□□□□□ -1.14
CLK1-203ENST00000409769 ORC1Q13415 861 aa7.91□□□□□ -1.14
CLK1-203ENST00000409769 PDE3AQ14432 1141 aa7.91□□□□□ -1.14
CLK1-203ENST00000409769 TP53INP2Q8IXH6 220 aa7.91□□□□□ -1.14
CLK1-203ENST00000409769 CCDC74AQ96AQ1 378 aa7.91□□□□□ -1.14
CLK1-203ENST00000409769 ALKBH8Q96BT7 664 aaKnown RBP7.91□□□□□ -1.14
CLK1-203ENST00000409769 ABCB6Q9NP58 842 aa7.91□□□□□ -1.14
CLK1-203ENST00000409769 FAM105AQ9NUU6 356 aa7.91□□□□□ -1.14
CLK1-203ENST00000409769 SOWAHDA6NJG2 315 aa7.9□□□□□ -1.14
CLK1-203ENST00000409769 FAM170BA6NMN3 283 aa7.9□□□□□ -1.14
CLK1-203ENST00000409769 TMC1Q8TDI8 760 aa7.9□□□□□ -1.14
CLK1-203ENST00000409769 WDR18Q9BV38 432 aa7.9□□□□□ -1.14
CLK1-203ENST00000409769 PPP4R2Q9NY27 417 aa7.9□□□□□ -1.14
CLK1-203ENST00000409769 TMEM238LA0A1B0GVL6 79 aa7.89□□□□□ -1.15
CLK1-203ENST00000409769 EIF1AYO14602 144 aaKnown RBP7.89□□□□□ -1.15
CLK1-203ENST00000409769 GADD45BO75293 160 aaPredicted RBP7.89□□□□□ -1.15
CLK1-203ENST00000409769 SLFN14P0C7P3 912 aa7.89□□□□□ -1.15
CLK1-203ENST00000409769 CYP27C1Q4G0S4 372 aa7.89□□□□□ -1.15
CLK1-203ENST00000409769 SEZ6L2Q6UXD5 910 aa7.89□□□□□ -1.15
CLK1-203ENST00000409769 CBLL1Q75N03 491 aa7.89□□□□□ -1.15
CLK1-203ENST00000409769 STK11IPQ8N1F8 1099 aa7.89□□□□□ -1.15
CLK1-203ENST00000409769 RBCK1Q9BYM8 510 aa7.89□□□□□ -1.15
CLK1-203ENST00000409769 ATXN3LQ9H3M9 355 aa7.89□□□□□ -1.15
CLK1-203ENST00000409769 KRT82Q9NSB4 513 aa7.89□□□□□ -1.15
CLK1-203ENST00000409769 XRCC5P13010 732 aaKnown RBP7.88□□□□□ -1.15
CLK1-203ENST00000409769 OGFOD3Q6PK18 319 aa7.88□□□□□ -1.15
CLK1-203ENST00000409769 ZNF765Q7L2R6 523 aa7.88□□□□□ -1.15
CLK1-203ENST00000409769 HOMEZQ8IX15 550 aa7.88□□□□□ -1.15
CLK1-203ENST00000409769 SHISA5Q8N114 240 aa7.88□□□□□ -1.15
CLK1-203ENST00000409769 GPR182O15218 404 aa7.87□□□□□ -1.15
CLK1-203ENST00000409769 ECEL1O95672 775 aa7.87□□□□□ -1.15
CLK1-203ENST00000409769 IGHA2P01877 340 aa7.87□□□□□ -1.15
CLK1-203ENST00000409769 JUNBP17275 347 aaPredicted RBP7.87□□□□□ -1.15
CLK1-203ENST00000409769 PPP2R3AQ06190 1150 aa7.87□□□□□ -1.15
CLK1-203ENST00000409769 FLCNQ8NFG4 579 aa7.87□□□□□ -1.15
CLK1-203ENST00000409769 MISP3Q96FF7 219 aa7.87□□□□□ -1.15
CLK1-203ENST00000409769 ASIC4Q96FT7 647 aa7.87□□□□□ -1.15
CLK1-203ENST00000409769 NIF3L1Q9GZT8 377 aa7.87□□□□□ -1.15
CLK1-203ENST00000409769 C1GALT1Q9NS00 363 aa7.87□□□□□ -1.15
CLK1-203ENST00000409769 ZC3H7BQ9UGR2 993 aaKnown RBP7.87□□□□□ -1.15
CLK1-203ENST00000409769 DAGLAQ9Y4D2 1042 aa7.87□□□□□ -1.15
CLK1-203ENST00000409769 IVNS1ABPQ9Y6Y0 642 aa7.87□□□□□ -1.15
CLK1-203ENST00000409769 TMPRSS2O15393 492 aa7.86□□□□□ -1.15
CLK1-203ENST00000409769 CSRNP1Q96S65 589 aa7.86□□□□□ -1.15
CLK1-203ENST00000409769 PIDD1Q9HB75 910 aa7.86□□□□□ -1.15
CLK1-203ENST00000409769 LRRC4CQ9HCJ2 640 aa7.86□□□□□ -1.15
CLK1-203ENST00000409769 CRIM1Q9NZV1 1036 aa7.86□□□□□ -1.15
CLK1-203ENST00000409769 ID3Q02535 119 aa7.85□□□□□ -1.15
CLK1-203ENST00000409769 NFXL1Q6ZNB6 911 aa7.85□□□□□ -1.15
CLK1-203ENST00000409769 NLRP2Q9NX02 1062 aa7.85□□□□□ -1.15
CLK1-203ENST00000409769 PPP1R9AQ9ULJ8 1098 aa7.85□□□□□ -1.15
CLK1-203ENST00000409769 GSTP1P09211 210 aaKnown RBP7.84□□□□□ -1.15
CLK1-203ENST00000409769 GRM2Q14416 872 aa7.84□□□□□ -1.15
CLK1-203ENST00000409769 KIF4BQ2VIQ3 1234 aa7.84□□□□□ -1.15
CLK1-203ENST00000409769 DTHD1Q6ZMT9 781 aa7.84□□□□□ -1.15
CLK1-203ENST00000409769 GLIS3Q8NEA6 775 aa7.84□□□□□ -1.15
CLK1-203ENST00000409769 PAK6Q9NQU5 681 aaPredicted RBP7.84□□□□□ -1.15
CLK1-203ENST00000409769 TMEM39AQ9NV64 488 aa7.84□□□□□ -1.15
CLK1-203ENST00000409769 SLC5A6Q9Y289 635 aa7.84□□□□□ -1.15
CLK1-203ENST00000409769 FANCD2OSQ96PS1 177 aa7.83□□□□□ -1.16
CLK1-203ENST00000409769 CCDC86Q9H6F5 360 aaKnown RBP7.83□□□□□ -1.16
CLK1-203ENST00000409769 ITGB5P18084 799 aa7.82□□□□□ -1.16
CLK1-203ENST00000409769 LIG1P18858 919 aa7.82□□□□□ -1.16
CLK1-203ENST00000409769 FAAP100Q0VG06 881 aa7.82□□□□□ -1.16
CLK1-203ENST00000409769 SMYD4Q8IYR2 804 aaPredicted RBP7.82□□□□□ -1.16
CLK1-203ENST00000409769 MKNK2Q9HBH9 465 aa7.82□□□□□ -1.16
CLK1-203ENST00000409769 DYNC1LI2O43237 492 aaPredicted RBP7.81□□□□□ -1.16
CLK1-203ENST00000409769 NETO1Q8TDF5 533 aa7.81□□□□□ -1.16
CLK1-203ENST00000409769 EMILIN2Q9BXX0 1053 aa7.81□□□□□ -1.16
CLK1-203ENST00000409769 GPN3Q9UHW5 284 aaPredicted RBP7.81□□□□□ -1.16
CLK1-203ENST00000409769 BIN1O00499 593 aa7.8□□□□□ -1.16
CLK1-203ENST00000409769 ZNF862O60290 1169 aa7.8□□□□□ -1.16
CLK1-203ENST00000409769 FCGRTP55899 365 aa7.8□□□□□ -1.16
CLK1-203ENST00000409769 AEBP1Q8IUX7 1158 aa7.8□□□□□ -1.16
CLK1-203ENST00000409769 EPS8L3Q8TE67 593 aaKnown RBP7.8□□□□□ -1.16
CLK1-203ENST00000409769 BCL7CQ8WUZ0 217 aaPredicted RBP7.8□□□□□ -1.16
CLK1-203ENST00000409769 DCTN4Q9UJW0 460 aa7.8□□□□□ -1.16
CLK1-203ENST00000409769 PCOLCE2Q9UKZ9 415 aa7.8□□□□□ -1.16
CLK1-203ENST00000409769 PCDHGC5Q9Y5F6 944 aa7.8□□□□□ -1.16
CLK1-203ENST00000409769 FAM87AP0C7U9 286 aa7.79□□□□□ -1.16
CLK1-203ENST00000409769 ZNF157P51786 506 aaPredicted RBP7.79□□□□□ -1.16
CLK1-203ENST00000409769 WDR89Q96FK6 387 aaPredicted RBP7.79□□□□□ -1.16
CLK1-203ENST00000409769 ZC3H12CQ9C0D7 883 aaKnown RBP7.79□□□□□ -1.16
CLK1-203ENST00000409769 DISC1Q9NRI5 854 aa7.79□□□□□ -1.16
CLK1-203ENST00000409769 SND1Q7KZF4 910 aaKnown RBP eCLIP7.78□□□□□ -1.16
CLK1-203ENST00000409769 PDZD3Q86UT5 571 aa7.78□□□□□ -1.16
CLK1-203ENST00000409769 KCNB2Q92953 911 aa7.78□□□□□ -1.16
CLK1-203ENST00000409769 KRTAP9-9Q9BYP9 154 aa7.78□□□□□ -1.16
CLK1-203ENST00000409769 KRTAP9-4Q9BYQ2 154 aa7.78□□□□□ -1.16
CLK1-203ENST00000409769 BCO2Q9BYV7 579 aa7.78□□□□□ -1.16
CLK1-203ENST00000409769 VAV3Q9UKW4 847 aa7.78□□□□□ -1.16
CLK1-203ENST00000409769 ERVK-24P63145 666 aa7.77□□□□□ -1.17
CLK1-203ENST00000409769 TTLL4Q14679 1199 aa7.77□□□□□ -1.17
CLK1-203ENST00000409769 COL19A1Q14993 1142 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms