RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 CACNA1SQ13698 1873 aa17.76■□□□□ 0.43
SCAMP4-202ENST00000409472 NHSQ6T4R5 1651 aa17.76■□□□□ 0.43
SCAMP4-202ENST00000409472 ZNF804BA4D1E1 1349 aa17.76■□□□□ 0.43
SCAMP4-202ENST00000409472 WDR19Q8NEZ3 1342 aa17.76■□□□□ 0.43
SCAMP4-202ENST00000409472 PATL2C9JE40 543 aaKnown RBP17.75■□□□□ 0.43
SCAMP4-202ENST00000409472 APOA5Q6Q788 366 aa17.75■□□□□ 0.43
SCAMP4-202ENST00000409472 TNMDQ9H2S6 317 aa17.75■□□□□ 0.43
SCAMP4-202ENST00000409472 FAM13BQ9NYF5 915 aa17.75■□□□□ 0.43
SCAMP4-202ENST00000409472 ABCF2Q9UG63 623 aa17.75■□□□□ 0.43
SCAMP4-202ENST00000409472 TNRC6CQ9HCJ0 1690 aaKnown RBP17.75■□□□□ 0.43
SCAMP4-202ENST00000409472 TYRO3Q06418 890 aa17.75■□□□□ 0.43
SCAMP4-202ENST00000409472 SF3B3Q15393 1217 aaKnown RBP17.75■□□□□ 0.43
SCAMP4-202ENST00000409472 UTP14CQ5TAP6 766 aaKnown RBP17.75■□□□□ 0.43
SCAMP4-202ENST00000409472 PHKBQ93100 1093 aa17.75■□□□□ 0.43
SCAMP4-202ENST00000409472 CLSTN2Q9H4D0 955 aa17.75■□□□□ 0.43
SCAMP4-202ENST00000409472 LY9Q9HBG7 655 aa17.75■□□□□ 0.43
SCAMP4-202ENST00000409472 LRP2BPQ9P2M1 347 aa17.75■□□□□ 0.43
SCAMP4-202ENST00000409472 MINPP1Q9UNW1 487 aa17.75■□□□□ 0.43
SCAMP4-202ENST00000409472 SLC4A4Q9Y6R1 1079 aa17.75■□□□□ 0.43
SCAMP4-202ENST00000409472 CPLX1O14810 134 aa17.74■□□□□ 0.43
SCAMP4-202ENST00000409472 POLR3DP05423 398 aaPredicted RBP17.74■□□□□ 0.43
SCAMP4-202ENST00000409472 FNBP4Q8N3X1 1017 aaPredicted RBP17.74■□□□□ 0.43
SCAMP4-202ENST00000409472 IGDCC4Q8TDY8 1250 aa17.74■□□□□ 0.43
SCAMP4-202ENST00000409472 SDR42E1Q8WUS8 393 aa17.74■□□□□ 0.43
SCAMP4-202ENST00000409472 C8orf76Q96K31 380 aa17.74■□□□□ 0.43
SCAMP4-202ENST00000409472 ZKSCAN3Q9BRR0 538 aa17.74■□□□□ 0.43
SCAMP4-202ENST00000409472 USP21Q9UK80 565 aa17.74■□□□□ 0.43
SCAMP4-202ENST00000409472 CFAP45Q9UL16 551 aa17.74■□□□□ 0.43
SCAMP4-202ENST00000409472 ADCY5O95622 1261 aa17.74■□□□□ 0.43
SCAMP4-202ENST00000409472 ALX1Q15699 326 aa17.74■□□□□ 0.43
SCAMP4-202ENST00000409472 ZNF384Q8TF68 577 aa17.74■□□□□ 0.43
SCAMP4-202ENST00000409472 ZSWIM5Q9P217 1185 aa17.74■□□□□ 0.43
SCAMP4-202ENST00000409472 RCOR1Q9UKL0 485 aa17.74■□□□□ 0.43
SCAMP4-202ENST00000409472 NOL7Q9UMY1 257 aaKnown RBP17.74■□□□□ 0.43
SCAMP4-202ENST00000409472 KIF3AQ9Y496 699 aa17.74■□□□□ 0.43
SCAMP4-202ENST00000409472 ZMYM6O95789 1325 aa17.73■□□□□ 0.43
SCAMP4-202ENST00000409472 TAF1LQ8IZX4 1826 aa17.73■□□□□ 0.43
SCAMP4-202ENST00000409472 A0A087WWV3 80 aa17.73■□□□□ 0.43
SCAMP4-202ENST00000409472 GTF2E1P29083 439 aaPredicted RBP17.73■□□□□ 0.43
SCAMP4-202ENST00000409472 BAZ2AQ9UIF9 1905 aaKnown RBP17.73■□□□□ 0.43
SCAMP4-202ENST00000409472 RANBP6O60518 1105 aaKnown RBP17.73■□□□□ 0.43
SCAMP4-202ENST00000409472 CCDC192P0DO97 292 aa17.73■□□□□ 0.43
SCAMP4-202ENST00000409472 TDO2P48775 406 aa17.73■□□□□ 0.43
SCAMP4-202ENST00000409472 METAP2P50579 478 aaKnown RBP eCLIP17.73■□□□□ 0.434e-7■■□□□ 12
SCAMP4-202ENST00000409472 PLCB2Q00722 1185 aa17.73■□□□□ 0.43
SCAMP4-202ENST00000409472 RRP12Q5JTH9 1297 aaKnown RBP17.73■□□□□ 0.43
SCAMP4-202ENST00000409472 RBM43Q6ZSC3 357 aaKnown RBP17.73■□□□□ 0.43
SCAMP4-202ENST00000409472 FBXO18Q8NFZ0 1043 aa17.73■□□□□ 0.43
SCAMP4-202ENST00000409472 DDX19AQ9NUU7 478 aaKnown RBP17.73■□□□□ 0.43
SCAMP4-202ENST00000409472 BSDC1Q9NW68 430 aaPredicted RBP17.73■□□□□ 0.43
SCAMP4-202ENST00000409472 NARFQ9UHQ1 456 aa17.73■□□□□ 0.43
SCAMP4-202ENST00000409472 CCNL1Q9UK58 526 aaPredicted RBP17.73■□□□□ 0.43
SCAMP4-202ENST00000409472 CYP7A1P22680 504 aa17.72■□□□□ 0.43
SCAMP4-202ENST00000409472 UVSSAQ2YD98 709 aa17.72■□□□□ 0.43
SCAMP4-202ENST00000409472 HS1BP3Q53T59 392 aa17.72■□□□□ 0.43
SCAMP4-202ENST00000409472 TMEM67Q5HYA8 995 aa17.72■□□□□ 0.43
SCAMP4-202ENST00000409472 LUZP1Q86V48 1076 aa17.72■□□□□ 0.43
SCAMP4-202ENST00000409472 FAM217BQ9NTX9 383 aaPredicted RBP17.72■□□□□ 0.43
SCAMP4-202ENST00000409472 CLIC4Q9Y696 253 aa17.72■□□□□ 0.43
SCAMP4-202ENST00000409472 PNPLA7Q6ZV29 1317 aa17.72■□□□□ 0.43
SCAMP4-202ENST00000409472 CCAR1Q8IX12 1150 aaKnown RBP17.72■□□□□ 0.43
SCAMP4-202ENST00000409472 RAI14Q9P0K7 980 aa17.72■□□□□ 0.43
SCAMP4-202ENST00000409472 ZKSCAN5Q9Y2L8 839 aa17.72■□□□□ 0.43
SCAMP4-202ENST00000409472 RPS6KA4O75676 772 aa17.71■□□□□ 0.43
SCAMP4-202ENST00000409472 EVX2Q03828 476 aa17.71■□□□□ 0.43
SCAMP4-202ENST00000409472 ANO6Q4KMQ2 910 aa17.71■□□□□ 0.43
SCAMP4-202ENST00000409472 AKNAD1Q5T1N1 836 aa17.71■□□□□ 0.43
SCAMP4-202ENST00000409472 FAM84BQ96KN1 310 aaPredicted RBP17.71■□□□□ 0.43
SCAMP4-202ENST00000409472 ZNF830Q96NB3 372 aaPredicted RBP17.71■□□□□ 0.43
SCAMP4-202ENST00000409472 DYNLL1P63167 89 aaKnown RBP17.71■□□□□ 0.42
SCAMP4-202ENST00000409472 SNW1Q13573 536 aaKnown RBP17.71■□□□□ 0.42
SCAMP4-202ENST00000409472 NFXL1Q6ZNB6 911 aa17.71■□□□□ 0.42
SCAMP4-202ENST00000409472 NBPF5PQ86XG9 351 aaPredicted RBP17.71■□□□□ 0.42
SCAMP4-202ENST00000409472 ERCC4Q92889 916 aaPredicted RBP17.71■□□□□ 0.42
SCAMP4-202ENST00000409472 TOMM22Q9NS69 142 aa17.71■□□□□ 0.42
SCAMP4-202ENST00000409472 JAG2Q9Y219 1238 aa17.71■□□□□ 0.42
SCAMP4-202ENST00000409472 MYH13Q9UKX3 1938 aa17.7■□□□□ 0.42
SCAMP4-202ENST00000409472 CYP2D7A0A087X1C5 515 aa17.7■□□□□ 0.42
SCAMP4-202ENST00000409472 DHX16O60231 1041 aaKnown RBP17.7■□□□□ 0.42
SCAMP4-202ENST00000409472 ME1P48163 572 aa17.7■□□□□ 0.42
SCAMP4-202ENST00000409472 KIF23Q02241 960 aaPredicted RBP17.7■□□□□ 0.42
SCAMP4-202ENST00000409472 NTRK3Q16288 839 aa17.7■□□□□ 0.42
SCAMP4-202ENST00000409472 ARHGEF1Q92888 912 aaKnown RBP17.7■□□□□ 0.42
SCAMP4-202ENST00000409472 TFCP2L1Q9NZI6 479 aa17.7■□□□□ 0.42
SCAMP4-202ENST00000409472 CCDC39Q9UFE4 941 aa17.7■□□□□ 0.42
SCAMP4-202ENST00000409472 LY75O60449 1722 aa17.7■□□□□ 0.42
SCAMP4-202ENST00000409472 SBF2Q86WG5 1849 aa17.7■□□□□ 0.42
SCAMP4-202ENST00000409472 IFIT3O14879 490 aaKnown RBP17.69■□□□□ 0.42
SCAMP4-202ENST00000409472 PTMAP06454 111 aaKnown RBP17.69■□□□□ 0.42
SCAMP4-202ENST00000409472 SETDB2Q96T68 719 aa17.69■□□□□ 0.42
SCAMP4-202ENST00000409472 PCDHA7Q9UN72 937 aa17.69■□□□□ 0.42
SCAMP4-202ENST00000409472 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.69■□□□□ 0.423e-7■■■□□ 16.4
SCAMP4-202ENST00000409472 DYNC1I1O14576 645 aa17.69■□□□□ 0.42
SCAMP4-202ENST00000409472 ZBTB43O43298 467 aa17.69■□□□□ 0.42
SCAMP4-202ENST00000409472 UBE4AQ14139 1066 aa17.69■□□□□ 0.42
SCAMP4-202ENST00000409472 SLC10A5Q5PT55 438 aa17.69■□□□□ 0.42
SCAMP4-202ENST00000409472 TMEM87BQ96K49 555 aa17.69■□□□□ 0.42
SCAMP4-202ENST00000409472 ZNF396Q96N95 335 aaPredicted RBP17.69■□□□□ 0.42
SCAMP4-202ENST00000409472 RIOK1Q9BRS2 568 aaKnown RBP17.69■□□□□ 0.42
SCAMP4-202ENST00000409472 ALG1Q9BT22 464 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms