RNA–Protein interactions for RNA: ENST00000399352.5

ITSN1-209, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-209ENST00000399352 PPFIA1Q13136 1202 aa18.05■□□□□ 0.48
ITSN1-209ENST00000399352 MTX1Q13505 466 aa18.05■□□□□ 0.48
ITSN1-209ENST00000399352 TRIM14Q14142 442 aa18.05■□□□□ 0.48
ITSN1-209ENST00000399352 TMCO4Q5TGY1 634 aa18.05■□□□□ 0.48
ITSN1-209ENST00000399352 SDCCAG8Q86SQ7 713 aaPredicted RBP18.05■□□□□ 0.48
ITSN1-209ENST00000399352 ZKSCAN3Q9BRR0 538 aa18.05■□□□□ 0.48
ITSN1-209ENST00000399352 SCAF11Q99590 1463 aaKnown RBP18.05■□□□□ 0.48
ITSN1-209ENST00000399352 IFNL2Q8IZJ0 200 aa18.05■□□□□ 0.48
ITSN1-209ENST00000399352 LMBRD1Q9NUN5 540 aa18.05■□□□□ 0.48
ITSN1-209ENST00000399352 RTL9Q8NET4 1388 aa18.05■□□□□ 0.48
ITSN1-209ENST00000399352 ERCC3P19447 782 aa18.05■□□□□ 0.48
ITSN1-209ENST00000399352 BEND3Q5T5X7 828 aa18.05■□□□□ 0.48
ITSN1-209ENST00000399352 MIGA1Q8NAN2 632 aa18.05■□□□□ 0.48
ITSN1-209ENST00000399352 OTUD7AQ8TE49 926 aaPredicted RBP18.05■□□□□ 0.48
ITSN1-209ENST00000399352 ALDH1L1O75891 902 aa18.04■□□□□ 0.48
ITSN1-209ENST00000399352 GBP7Q8N8V2 638 aaPredicted RBP18.04■□□□□ 0.48
ITSN1-209ENST00000399352 PHF8Q9UPP1 1060 aa18.04■□□□□ 0.48
ITSN1-209ENST00000399352 GCKP35557 465 aa18.04■□□□□ 0.48
ITSN1-209ENST00000399352 PDE1CQ14123 709 aaPredicted RBP18.04■□□□□ 0.48
ITSN1-209ENST00000399352 ERCC6LQ2NKX8 1250 aa18.04■□□□□ 0.48
ITSN1-209ENST00000399352 ANO1Q5XXA6 986 aa18.04■□□□□ 0.48
ITSN1-209ENST00000399352 PPP1R21Q6ZMI0 780 aa18.04■□□□□ 0.48
ITSN1-209ENST00000399352 FMNL3Q8IVF7 1028 aa18.04■□□□□ 0.48
ITSN1-209ENST00000399352 SLF1Q9BQI6 1058 aa18.04■□□□□ 0.48
ITSN1-209ENST00000399352 PPANQ9NQ55 473 aaKnown RBP18.04■□□□□ 0.48
ITSN1-209ENST00000399352 IMPACTQ9P2X3 320 aa18.04■□□□□ 0.48
ITSN1-209ENST00000399352 HECW1Q76N89 1606 aa18.04■□□□□ 0.48
ITSN1-209ENST00000399352 SYNRGQ9UMZ2 1314 aa18.04■□□□□ 0.48
ITSN1-209ENST00000399352 NOX5Q96PH1 765 aa18.04■□□□□ 0.48
ITSN1-209ENST00000399352 VCXQ9H320 206 aa18.04■□□□□ 0.48
ITSN1-209ENST00000399352 TMEM63CQ9P1W3 806 aa18.04■□□□□ 0.48
ITSN1-209ENST00000399352 CEP104O60308 925 aa18.04■□□□□ 0.48
ITSN1-209ENST00000399352 ZNF853P0CG23 659 aa18.04■□□□□ 0.48
ITSN1-209ENST00000399352 PDE4DQ08499 809 aa18.04■□□□□ 0.48
ITSN1-209ENST00000399352 KRT24Q2M2I5 525 aa18.04■□□□□ 0.48
ITSN1-209ENST00000399352 STK38LQ9Y2H1 464 aa18.04■□□□□ 0.48
ITSN1-209ENST00000399352 KRT9P35527 623 aa18.03■□□□□ 0.48
ITSN1-209ENST00000399352 CDK13Q14004 1512 aaKnown RBP18.03■□□□□ 0.48
ITSN1-209ENST00000399352 OTUD7BQ6GQQ9 843 aa18.03■□□□□ 0.48
ITSN1-209ENST00000399352 KSR2Q6VAB6 950 aa18.03■□□□□ 0.48
ITSN1-209ENST00000399352 SYNJ1O43426 1573 aa18.03■□□□□ 0.48
ITSN1-209ENST00000399352 PRXQ9BXM0 1461 aa18.03■□□□□ 0.48
ITSN1-209ENST00000399352 POLR2DO15514 142 aaKnown RBP18.03■□□□□ 0.48
ITSN1-209ENST00000399352 VPS52Q8N1B4 723 aa18.03■□□□□ 0.48
ITSN1-209ENST00000399352 NCOA5Q9HCD5 579 aaKnown RBP18.03■□□□□ 0.48
ITSN1-209ENST00000399352 NFE2L3Q9Y4A8 694 aa18.03■□□□□ 0.48
ITSN1-209ENST00000399352 RALGAPBQ86X10 1494 aa18.02■□□□□ 0.48
ITSN1-209ENST00000399352 RPS6KB1P23443 525 aa18.02■□□□□ 0.48
ITSN1-209ENST00000399352 GSTO1P78417 241 aa18.02■□□□□ 0.48
ITSN1-209ENST00000399352 PAK2Q13177 524 aa18.02■□□□□ 0.48
ITSN1-209ENST00000399352 PICALMQ13492 652 aa18.02■□□□□ 0.48
ITSN1-209ENST00000399352 RRP36Q96EU6 259 aaKnown RBP18.02■□□□□ 0.48
ITSN1-209ENST00000399352 DDX21Q9NR30 783 aaKnown RBP eCLIP18.02■□□□□ 0.48
ITSN1-209ENST00000399352 CCDC170Q8IYT3 715 aa18.02■□□□□ 0.48
ITSN1-209ENST00000399352 TAB2Q9NYJ8 693 aa18.02■□□□□ 0.48
ITSN1-209ENST00000399352 ANKRD36BQ8N2N9 1353 aa18.02■□□□□ 0.48
ITSN1-209ENST00000399352 TNFAIP3P21580 790 aa18.02■□□□□ 0.48
ITSN1-209ENST00000399352 SLC39A6Q13433 755 aa18.02■□□□□ 0.48
ITSN1-209ENST00000399352 CCDC62Q6P9F0 684 aa18.02■□□□□ 0.48
ITSN1-209ENST00000399352 ZNF365Q70YC5 407 aa18.02■□□□□ 0.48
ITSN1-209ENST00000399352 CSGALNACT2Q8N6G5 542 aa18.02■□□□□ 0.48
ITSN1-209ENST00000399352 FAM184BQ9ULE4 1060 aa18.02■□□□□ 0.48
ITSN1-209ENST00000399352 MAGEB6P1A0A0J9YX57 407 aa18.02■□□□□ 0.47
ITSN1-209ENST00000399352 VAMP4O75379 141 aa18.02■□□□□ 0.47
ITSN1-209ENST00000399352 GMNNO75496 209 aa18.02■□□□□ 0.47
ITSN1-209ENST00000399352 TFCP2Q12800 502 aa18.02■□□□□ 0.47
ITSN1-209ENST00000399352 TTLL12Q14166 644 aaPredicted RBP18.02■□□□□ 0.47
ITSN1-209ENST00000399352 SV2BQ7L1I2 683 aa18.02■□□□□ 0.47
ITSN1-209ENST00000399352 CWF19L2Q2TBE0 894 aaKnown RBP18.01■□□□□ 0.47
ITSN1-209ENST00000399352 CCDC152Q4G0S7 254 aa18.01■□□□□ 0.47
ITSN1-209ENST00000399352 TMTC1Q8IUR5 882 aa18.01■□□□□ 0.47
ITSN1-209ENST00000399352 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.01■□□□□ 0.47
ITSN1-209ENST00000399352 SPDYE3A6NKU9 549 aa18.01■□□□□ 0.47
ITSN1-209ENST00000399352 F8W031 263 aaPredicted RBP18.01■□□□□ 0.47
ITSN1-209ENST00000399352 LIG3P49916 1009 aa18.01■□□□□ 0.47
ITSN1-209ENST00000399352 GNGT1P63211 74 aa18.01■□□□□ 0.47
ITSN1-209ENST00000399352 EPSTI1Q96J88 318 aa18.01■□□□□ 0.47
ITSN1-209ENST00000399352 ODF2LQ9ULJ1 636 aa18.01■□□□□ 0.47
ITSN1-209ENST00000399352 ZBTB21Q9ULJ3 1066 aa18.01■□□□□ 0.47
ITSN1-209ENST00000399352 GEN1Q17RS7 908 aa18.01■□□□□ 0.47
ITSN1-209ENST00000399352 KRT71Q3SY84 523 aa18.01■□□□□ 0.47
ITSN1-209ENST00000399352 TAOK1Q7L7X3 1001 aa18.01■□□□□ 0.47
ITSN1-209ENST00000399352 GRIN2BQ13224 1484 aa18.01■□□□□ 0.47
ITSN1-209ENST00000399352 RPL13P26373 211 aaKnown RBP18.01■□□□□ 0.47
ITSN1-209ENST00000399352 LETM2Q2VYF4 491 aa18.01■□□□□ 0.47
ITSN1-209ENST00000399352 HHATQ5VTY9 493 aa18.01■□□□□ 0.47
ITSN1-209ENST00000399352 RNF10Q8N5U6 811 aaKnown RBP18.01■□□□□ 0.47
ITSN1-209ENST00000399352 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.01■□□□□ 0.47
ITSN1-209ENST00000399352 RPRD2Q5VT52 1461 aaKnown RBP18.01■□□□□ 0.47
ITSN1-209ENST00000399352 MAGEA1P43355 309 aa18.01■□□□□ 0.47
ITSN1-209ENST00000399352 NLRP12P59046 1061 aa18.01■□□□□ 0.47
ITSN1-209ENST00000399352 MGARPQ8TDB4 240 aa18.01■□□□□ 0.47
ITSN1-209ENST00000399352 ASIC3Q9UHC3 531 aa18.01■□□□□ 0.47
ITSN1-209ENST00000399352 SOS1Q07889 1333 aaPredicted RBP18■□□□□ 0.47
ITSN1-209ENST00000399352 ZNF202O95125 648 aa18■□□□□ 0.47
ITSN1-209ENST00000399352 KRT5P13647 590 aa18■□□□□ 0.47
ITSN1-209ENST00000399352 CCDC65Q8IXS2 484 aa18■□□□□ 0.47
ITSN1-209ENST00000399352 MAGEB6Q8N7X4 407 aa18■□□□□ 0.47
ITSN1-209ENST00000399352 MAK16Q9BXY0 300 aaKnown RBP18■□□□□ 0.47
ITSN1-209ENST00000399352 ZNF215Q9UL58 517 aaPredicted RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms