RNA–Protein interactions for RNA: ENST00000398568.6

CYLD-202, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYLD, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-202ENST00000398568 PPP1R12AO14974 1030 aaPredicted RBP17.17■□□□□ 0.34
CYLD-202ENST00000398568 NDUFA8P51970 172 aa17.17■□□□□ 0.34
CYLD-202ENST00000398568 ADALQ6DHV7 355 aa17.17■□□□□ 0.34
CYLD-202ENST00000398568 HMG20BQ9P0W2 317 aa17.17■□□□□ 0.34
CYLD-202ENST00000398568 CTAGE15A4D2H0 777 aa17.17■□□□□ 0.34
CYLD-202ENST00000398568 CTAGE8P0CG41 777 aa17.17■□□□□ 0.34
CYLD-202ENST00000398568 VSNL1P62760 191 aa17.17■□□□□ 0.34
CYLD-202ENST00000398568 NMIQ13287 307 aaPredicted RBP17.17■□□□□ 0.34
CYLD-202ENST00000398568 KRT32Q14532 448 aa17.17■□□□□ 0.34
CYLD-202ENST00000398568 TOGARAM2Q6ZUX3 1019 aa17.17■□□□□ 0.34
CYLD-202ENST00000398568 CTAGE6Q86UF2 777 aa17.17■□□□□ 0.34
CYLD-202ENST00000398568 CTAGE4Q8IX94 777 aa17.17■□□□□ 0.34
CYLD-202ENST00000398568 NLRP2Q9NX02 1062 aa17.17■□□□□ 0.34
CYLD-202ENST00000398568 KIF1AQ12756 1690 aa17.16■□□□□ 0.34
CYLD-202ENST00000398568 CCDC175P0C221 793 aa17.16■□□□□ 0.34
CYLD-202ENST00000398568 MYL5Q02045 173 aa17.16■□□□□ 0.34
CYLD-202ENST00000398568 KCNH5Q8NCM2 988 aa17.16■□□□□ 0.34
CYLD-202ENST00000398568 FAM227BQ96M60 508 aa17.16■□□□□ 0.34
CYLD-202ENST00000398568 MTX1Q13505 466 aa17.16■□□□□ 0.34
CYLD-202ENST00000398568 NEDD9Q14511 834 aa17.16■□□□□ 0.34
CYLD-202ENST00000398568 OLFM4Q6UX06 510 aa17.16■□□□□ 0.34
CYLD-202ENST00000398568 CABS1Q96KC9 395 aa17.16■□□□□ 0.34
CYLD-202ENST00000398568 DESI2Q9BSY9 194 aa17.16■□□□□ 0.34
CYLD-202ENST00000398568 A0A1W2PQ27 194 aa17.15■□□□□ 0.34
CYLD-202ENST00000398568 A0A1W2PQ64 194 aa17.15■□□□□ 0.34
CYLD-202ENST00000398568 A0A1W2PQD8 194 aa17.15■□□□□ 0.34
CYLD-202ENST00000398568 NF2P35240 595 aa17.15■□□□□ 0.34
CYLD-202ENST00000398568 STAG1Q8WVM7 1258 aa17.15■□□□□ 0.34
CYLD-202ENST00000398568 LZTFL1Q9NQ48 299 aa17.15■□□□□ 0.34
CYLD-202ENST00000398568 PIK3C2AO00443 1686 aa17.15■□□□□ 0.34
CYLD-202ENST00000398568 KIAA0754O94854 1291 aa17.15■□□□□ 0.34
CYLD-202ENST00000398568 COL9A3Q14050 684 aaPredicted RBP17.15■□□□□ 0.34
CYLD-202ENST00000398568 POLA2Q14181 598 aa17.15■□□□□ 0.34
CYLD-202ENST00000398568 PTPN21Q16825 1174 aa17.15■□□□□ 0.34
CYLD-202ENST00000398568 RBM28Q9NW13 759 aaKnown RBP17.15■□□□□ 0.34
CYLD-202ENST00000398568 CCDC189A1A4V9 331 aa17.14■□□□□ 0.34
CYLD-202ENST00000398568 MAP9Q49MG5 647 aa17.14■□□□□ 0.34
CYLD-202ENST00000398568 KCNV1Q6PIU1 500 aa17.14■□□□□ 0.34
CYLD-202ENST00000398568 CAPN7Q9Y6W3 813 aa17.14■□□□□ 0.34
CYLD-202ENST00000398568 TMEM232C9JQI7 657 aa17.14■□□□□ 0.33
CYLD-202ENST00000398568 SCP2P22307 547 aa17.14■□□□□ 0.33
CYLD-202ENST00000398568 Q6ZUG5 572 aa17.14■□□□□ 0.33
CYLD-202ENST00000398568 ARHGEF25Q86VW2 580 aa17.14■□□□□ 0.33
CYLD-202ENST00000398568 FAM76AQ8TAV0 307 aa17.14■□□□□ 0.33
CYLD-202ENST00000398568 LLPHQ9BRT6 129 aaKnown RBP17.14■□□□□ 0.33
CYLD-202ENST00000398568 LRRIQ3A6PVS8 624 aaPredicted RBP17.14■□□□□ 0.33
CYLD-202ENST00000398568 GUCY1B3Q02153 619 aa17.14■□□□□ 0.33
CYLD-202ENST00000398568 NEK1Q96PY6 1258 aa17.14■□□□□ 0.33
CYLD-202ENST00000398568 COL16A1Q07092 1604 aaPredicted RBP17.14■□□□□ 0.33
CYLD-202ENST00000398568 AKAP12Q02952 1782 aa17.13■□□□□ 0.33
CYLD-202ENST00000398568 USP42Q9H9J4 1324 aaKnown RBP17.13■□□□□ 0.33
CYLD-202ENST00000398568 CTAGE9A4FU28 777 aa17.13■□□□□ 0.33
CYLD-202ENST00000398568 TMEM139Q8IV31 216 aa17.13■□□□□ 0.33
CYLD-202ENST00000398568 ZNF569Q5MCW4 686 aa17.13■□□□□ 0.33
CYLD-202ENST00000398568 TOM1L2Q6ZVM7 507 aa17.13■□□□□ 0.33
CYLD-202ENST00000398568 VEZTQ9HBM0 779 aa17.13■□□□□ 0.33
CYLD-202ENST00000398568 ZNF202O95125 648 aa17.13■□□□□ 0.33
CYLD-202ENST00000398568 HOXC9P31274 260 aa17.13■□□□□ 0.33
CYLD-202ENST00000398568 ELF1P32519 619 aa17.13■□□□□ 0.33
CYLD-202ENST00000398568 ADKP55263 362 aaKnown RBP17.13■□□□□ 0.33
CYLD-202ENST00000398568 IGSF22Q8N9C0 903 aa17.13■□□□□ 0.33
CYLD-202ENST00000398568 CLIC6Q96NY7 704 aa17.13■□□□□ 0.33
CYLD-202ENST00000398568 CRACR2AQ9BSW2 395 aa17.13■□□□□ 0.33
CYLD-202ENST00000398568 FSD1Q9BTV5 496 aa17.13■□□□□ 0.33
CYLD-202ENST00000398568 VIPAS39Q9H9C1 493 aa17.13■□□□□ 0.33
CYLD-202ENST00000398568 OVOS2A0A0J9YW53 1432 aa17.13■□□□□ 0.33
CYLD-202ENST00000398568 OVOS2Q6IE36 1432 aa17.13■□□□□ 0.33
CYLD-202ENST00000398568 SCRN1Q12765 414 aa17.12■□□□□ 0.33
CYLD-202ENST00000398568 IRX2Q9BZI1 471 aaPredicted RBP17.12■□□□□ 0.33
CYLD-202ENST00000398568 A1CFQ9NQ94 594 aaKnown RBP17.12■□□□□ 0.33
CYLD-202ENST00000398568 MAP2P11137 1827 aaKnown RBP17.12■□□□□ 0.33
CYLD-202ENST00000398568 MON2Q7Z3U7 1717 aa17.12■□□□□ 0.33
CYLD-202ENST00000398568 KIF20BQ96Q89 1820 aa17.12■□□□□ 0.33
CYLD-202ENST00000398568 MYO1BO43795 1136 aa17.12■□□□□ 0.33
CYLD-202ENST00000398568 BCAS4Q8TDM0 211 aa17.12■□□□□ 0.33
CYLD-202ENST00000398568 KCNG4Q8TDN1 519 aa17.12■□□□□ 0.33
CYLD-202ENST00000398568 NHSL1Q5SYE7 1610 aa17.12■□□□□ 0.33
CYLD-202ENST00000398568 MED1Q15648 1581 aaPredicted RBP17.12■□□□□ 0.33
CYLD-202ENST00000398568 MCM3P25205 808 aa17.12■□□□□ 0.33
CYLD-202ENST00000398568 AKAP17AQ02040 695 aaKnown RBP17.12■□□□□ 0.33
CYLD-202ENST00000398568 CCDC148Q8NFR7 591 aa17.12■□□□□ 0.33
CYLD-202ENST00000398568 ANKRD24Q8TF21 1146 aa17.12■□□□□ 0.33
CYLD-202ENST00000398568 AHDC1Q5TGY3 1603 aaPredicted RBP17.11■□□□□ 0.33
CYLD-202ENST00000398568 PTPDC1A2A3K4 754 aa17.11■□□□□ 0.33
CYLD-202ENST00000398568 NEBLO76041 1014 aa17.11■□□□□ 0.33
CYLD-202ENST00000398568 OTUD6BQ8N6M0 293 aa17.11■□□□□ 0.33
CYLD-202ENST00000398568 C21orf2O43822 256 aa17.1■□□□□ 0.33
CYLD-202ENST00000398568 STIM1Q13586 685 aa17.1■□□□□ 0.33
CYLD-202ENST00000398568 SMARCC2Q8TAQ2 1214 aa17.1■□□□□ 0.33
CYLD-202ENST00000398568 FANCLQ9NW38 375 aa17.1■□□□□ 0.33
CYLD-202ENST00000398568 RTEL1Q9NZ71 1219 aa17.1■□□□□ 0.33
CYLD-202ENST00000398568 USP21Q9UK80 565 aa17.1■□□□□ 0.33
CYLD-202ENST00000398568 CHUKO15111 745 aa17.1■□□□□ 0.33
CYLD-202ENST00000398568 N4BP2L2Q92802 583 aaPredicted RBP17.1■□□□□ 0.33
CYLD-202ENST00000398568 MIEF2Q96C03 454 aa17.1■□□□□ 0.33
CYLD-202ENST00000398568 TAF6LQ9Y6J9 622 aa17.1■□□□□ 0.33
CYLD-202ENST00000398568 AFF2P51816 1311 aa17.1■□□□□ 0.33
CYLD-202ENST00000398568 AARSP49588 968 aaKnown RBP eCLIP17.1■□□□□ 0.33
CYLD-202ENST00000398568 WHAMMP3Q1A5X7 153 aa17.1■□□□□ 0.33
CYLD-202ENST00000398568 CPLX2Q6PUV4 134 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms