RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 TRIM75PA6NK02 468 aa17.65■□□□□ 0.42
LSS-202ENST00000397728 IRX3P78415 501 aaPredicted RBP17.65■□□□□ 0.42
LSS-202ENST00000397728 FAM47AQ5JRC9 791 aa17.65■□□□□ 0.42
LSS-202ENST00000397728 LUC7LQ9NQ29 371 aaKnown RBP17.65■□□□□ 0.42
LSS-202ENST00000397728 ANGEL1Q9UNK9 670 aaKnown RBP17.65■□□□□ 0.42
LSS-202ENST00000397728 BMP15O95972 392 aa17.65■□□□□ 0.42
LSS-202ENST00000397728 RBM28Q9NW13 759 aaKnown RBP17.65■□□□□ 0.42
LSS-202ENST00000397728 ZSCAN22P10073 491 aaPredicted RBP17.64■□□□□ 0.41
LSS-202ENST00000397728 DCAF15Q66K64 600 aa17.64■□□□□ 0.41
LSS-202ENST00000397728 CC2D2BQ6DHV5 1058 aa17.64■□□□□ 0.41
LSS-202ENST00000397728 TRIM21P19474 475 aaKnown RBP17.64■□□□□ 0.41
LSS-202ENST00000397728 CCDC173Q0VFZ6 552 aa17.64■□□□□ 0.41
LSS-202ENST00000397728 CLIP2Q9UDT6 1046 aa17.64■□□□□ 0.41
LSS-202ENST00000397728 MARCKSP29966 332 aaPredicted RBP17.64■□□□□ 0.41
LSS-202ENST00000397728 R3HDM1Q15032 1099 aaKnown RBP17.64■□□□□ 0.41
LSS-202ENST00000397728 TBC1D9BQ66K14 1250 aa17.64■□□□□ 0.41
LSS-202ENST00000397728 TTLL11Q8NHH1 800 aa17.64■□□□□ 0.41
LSS-202ENST00000397728 ANO10Q9NW15 660 aa17.64■□□□□ 0.41
LSS-202ENST00000397728 PKD2L1Q9P0L9 805 aa17.64■□□□□ 0.41
LSS-202ENST00000397728 C8orf34Q49A92 452 aa17.63■□□□□ 0.41
LSS-202ENST00000397728 DBNLQ9UJU6 430 aaKnown RBP17.63■□□□□ 0.41
LSS-202ENST00000397728 PATL2C9JE40 543 aaKnown RBP17.63■□□□□ 0.41
LSS-202ENST00000397728 CIAO1O76071 339 aa17.63■□□□□ 0.41
LSS-202ENST00000397728 TCERG1LQ5VWI1 586 aa17.63■□□□□ 0.41
LSS-202ENST00000397728 CAGE1Q8TC20 777 aa17.63■□□□□ 0.41
LSS-202ENST00000397728 ZBTB21Q9ULJ3 1066 aa17.63■□□□□ 0.41
LSS-202ENST00000397728 SETBP1Q9Y6X0 1596 aa17.63■□□□□ 0.41
LSS-202ENST00000397728 NSMFQ6X4W1 530 aa17.63■□□□□ 0.41
LSS-202ENST00000397728 MYL10Q9BUA6 226 aa17.63■□□□□ 0.41
LSS-202ENST00000397728 ARPP21Q9UBL0 812 aaPredicted RBP17.63■□□□□ 0.41
LSS-202ENST00000397728 BACH1O14867 736 aa17.62■□□□□ 0.41
LSS-202ENST00000397728 SEC62Q99442 399 aaKnown RBP17.62■□□□□ 0.41
LSS-202ENST00000397728 HOMER2Q9NSB8 354 aa17.62■□□□□ 0.41
LSS-202ENST00000397728 V9GY48 417 aaPredicted RBP17.62■□□□□ 0.41
LSS-202ENST00000397728 KRT2P35908 639 aa17.62■□□□□ 0.41
LSS-202ENST00000397728 STXBP4Q6ZWJ1 553 aa17.62■□□□□ 0.41
LSS-202ENST00000397728 BICD1Q96G01 975 aa17.62■□□□□ 0.41
LSS-202ENST00000397728 GPR101Q96P66 508 aaPredicted RBP17.62■□□□□ 0.41
LSS-202ENST00000397728 RTKN2Q8IZC4 609 aa17.62■□□□□ 0.41
LSS-202ENST00000397728 QRICH2Q9H0J4 1663 aa17.62■□□□□ 0.41
LSS-202ENST00000397728 ISM2Q6H9L7 571 aa17.62■□□□□ 0.41
LSS-202ENST00000397728 SYNE4Q8N205 404 aa17.62■□□□□ 0.41
LSS-202ENST00000397728 MNS1Q8NEH6 495 aa17.62■□□□□ 0.41
LSS-202ENST00000397728 TAOK3Q9H2K8 898 aa17.62■□□□□ 0.41
LSS-202ENST00000397728 SPATA31A5Q5VU36 1347 aa17.61■□□□□ 0.41
LSS-202ENST00000397728 SPATA31A7Q8IWB4 1347 aa17.61■□□□□ 0.41
LSS-202ENST00000397728 PPARAQ07869 468 aa17.61■□□□□ 0.41
LSS-202ENST00000397728 RPS6KB1P23443 525 aa17.61■□□□□ 0.41
LSS-202ENST00000397728 HAUS7Q99871 368 aa17.61■□□□□ 0.41
LSS-202ENST00000397728 PYM1Q9BRP8 204 aaKnown RBP17.61■□□□□ 0.41
LSS-202ENST00000397728 RNF123Q5XPI4 1314 aa17.61■□□□□ 0.41
LSS-202ENST00000397728 AKNAD1Q5T1N1 836 aa17.61■□□□□ 0.41
LSS-202ENST00000397728 CCDC183Q5T5S1 534 aa17.61■□□□□ 0.41
LSS-202ENST00000397728 MCM7P33993 719 aa17.6■□□□□ 0.41
LSS-202ENST00000397728 SSH2Q76I76 1423 aa17.6■□□□□ 0.41
LSS-202ENST00000397728 TRMT2AQ8IZ69 625 aaKnown RBP17.6■□□□□ 0.41
LSS-202ENST00000397728 ZC3H13Q5T200 1668 aaKnown RBP17.6■□□□□ 0.41
LSS-202ENST00000397728 ZBED4O75132 1171 aa17.6■□□□□ 0.41
LSS-202ENST00000397728 STAT6P42226 847 aa17.6■□□□□ 0.41
LSS-202ENST00000397728 AFMP43652 599 aa17.6■□□□□ 0.41
LSS-202ENST00000397728 NCOA5Q9HCD5 579 aaKnown RBP17.6■□□□□ 0.41
LSS-202ENST00000397728 TLR7Q9NYK1 1049 aaKnown RBP17.6■□□□□ 0.41
LSS-202ENST00000397728 FGFR1OPO95684 399 aaKnown RBP17.6■□□□□ 0.41
LSS-202ENST00000397728 SYKP43405 635 aa17.6■□□□□ 0.41
LSS-202ENST00000397728 FKBP15Q5T1M5 1219 aa17.6■□□□□ 0.41
LSS-202ENST00000397728 DDX19AQ9NUU7 478 aaKnown RBP17.6■□□□□ 0.41
LSS-202ENST00000397728 LAMC1P11047 1609 aa17.6■□□□□ 0.41
LSS-202ENST00000397728 KRT79Q5XKE5 535 aa17.6■□□□□ 0.41
LSS-202ENST00000397728 IFNL3Q8IZI9 196 aa17.6■□□□□ 0.41
LSS-202ENST00000397728 LRRC27Q9C0I9 530 aa17.6■□□□□ 0.41
LSS-202ENST00000397728 CTAGE5O15320 804 aa17.59■□□□□ 0.41
LSS-202ENST00000397728 SEC24BO95487 1268 aa17.59■□□□□ 0.41
LSS-202ENST00000397728 SPON1Q9HCB6 807 aa17.59■□□□□ 0.41
LSS-202ENST00000397728 DIP2AQ14689 1571 aa17.59■□□□□ 0.41
LSS-202ENST00000397728 A0A0D9SFI3 127 aa17.59■□□□□ 0.41
LSS-202ENST00000397728 LETM2Q2VYF4 491 aa17.59■□□□□ 0.41
LSS-202ENST00000397728 USH1GQ495M9 461 aa17.59■□□□□ 0.41
LSS-202ENST00000397728 CIAPIN1Q6FI81 312 aa17.59■□□□□ 0.41
LSS-202ENST00000397728 KCNG4Q8TDN1 519 aa17.59■□□□□ 0.41
LSS-202ENST00000397728 DLC1Q96QB1 1528 aa17.59■□□□□ 0.41
LSS-202ENST00000397728 H7C1W4 665 aa17.59■□□□□ 0.41
LSS-202ENST00000397728 BARGINQ6ZT62 677 aa17.59■□□□□ 0.41
LSS-202ENST00000397728 GOPCQ9HD26 462 aa17.59■□□□□ 0.41
LSS-202ENST00000397728 ZNF521Q96K83 1311 aa17.59■□□□□ 0.41
LSS-202ENST00000397728 SEMA3EO15041 775 aa17.59■□□□□ 0.41
LSS-202ENST00000397728 PTPN12Q05209 780 aaKnown RBP17.59■□□□□ 0.41
LSS-202ENST00000397728 NFIXQ14938 502 aa17.59■□□□□ 0.41
LSS-202ENST00000397728 CERKLQ49MI3 558 aaPredicted RBP17.59■□□□□ 0.41
LSS-202ENST00000397728 CCDC40Q4G0X9 1142 aa17.59■□□□□ 0.41
LSS-202ENST00000397728 TCHPQ9BT92 498 aa17.59■□□□□ 0.41
LSS-202ENST00000397728 PAGR1Q9BTK6 254 aa17.59■□□□□ 0.41
LSS-202ENST00000397728 SNX14Q9Y5W7 946 aa17.59■□□□□ 0.41
LSS-202ENST00000397728 ENOX2Q16206 610 aaKnown RBP17.58■□□□□ 0.41
LSS-202ENST00000397728 PI16Q6UXB8 463 aa17.58■□□□□ 0.41
LSS-202ENST00000397728 BSDC1Q9NW68 430 aaPredicted RBP17.58■□□□□ 0.41
LSS-202ENST00000397728 IGKV5-2P06315 115 aa17.58■□□□□ 0.4
LSS-202ENST00000397728 FNBP4Q8N3X1 1017 aaPredicted RBP17.58■□□□□ 0.4
LSS-202ENST00000397728 KIFC2Q96AC6 838 aa17.58■□□□□ 0.4
LSS-202ENST00000397728 KANK3Q6NY19 840 aa17.58■□□□□ 0.4
LSS-202ENST00000397728 CACNA2D4Q7Z3S7 1137 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 194.8 ms