RNA–Protein interactions for RNA: ENST00000395978.7

BDNF-203, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,988 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-203ENST00000395978 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.53□□□□□ -1.2
BDNF-203ENST00000395978 SLF2Q8IX21 1173 aa7.53□□□□□ -1.2
BDNF-203ENST00000395978 MYL10Q9BUA6 226 aa7.53□□□□□ -1.2
BDNF-203ENST00000395978 ISCA1Q9BUE6 129 aa7.53□□□□□ -1.2
BDNF-203ENST00000395978 ERVV-1B6SEH8 477 aa7.52□□□□□ -1.2
BDNF-203ENST00000395978 ZNF202O95125 648 aa7.52□□□□□ -1.2
BDNF-203ENST00000395978 DEXIO95424 95 aa7.52□□□□□ -1.2
BDNF-203ENST00000395978 CTDSPL2Q05D32 466 aa7.52□□□□□ -1.2
BDNF-203ENST00000395978 IKQ13123 557 aaPredicted RBP7.52□□□□□ -1.2
BDNF-203ENST00000395978 RFX7Q2KHR2 1363 aa7.52□□□□□ -1.2
BDNF-203ENST00000395978 CCDC70Q6NSX1 233 aa7.52□□□□□ -1.2
BDNF-203ENST00000395978 C8orf37Q96NL8 207 aa7.52□□□□□ -1.2
BDNF-203ENST00000395978 PYM1Q9BRP8 204 aaKnown RBP7.52□□□□□ -1.2
BDNF-203ENST00000395978 ALDH8A1Q9H2A2 487 aaPredicted RBP7.52□□□□□ -1.2
BDNF-203ENST00000395978 ZNHIT6Q9NWK9 470 aaKnown RBP7.52□□□□□ -1.2
BDNF-203ENST00000395978 SEC63Q9UGP8 760 aaKnown RBP7.52□□□□□ -1.2
BDNF-203ENST00000395978 RCOR1Q9UKL0 485 aa7.52□□□□□ -1.2
BDNF-203ENST00000395978 RTCBQ9Y3I0 505 aaKnown RBP7.52□□□□□ -1.2
BDNF-203ENST00000395978 KNDC1Q76NI1 1749 aa7.52□□□□□ -1.21
BDNF-203ENST00000395978 LOC102724428A0A0B4J2F2 783 aa7.52□□□□□ -1.21
BDNF-203ENST00000395978 GNAQP50148 359 aa7.52□□□□□ -1.21
BDNF-203ENST00000395978 SIK1P57059 783 aa7.52□□□□□ -1.21
BDNF-203ENST00000395978 GSTO1P78417 241 aa7.52□□□□□ -1.21
BDNF-203ENST00000395978 CEP135Q66GS9 1140 aa7.52□□□□□ -1.21
BDNF-203ENST00000395978 DIS3L2Q8IYB7 885 aaKnown RBP7.52□□□□□ -1.21
BDNF-203ENST00000395978 IFNL3Q8IZI9 196 aa7.52□□□□□ -1.21
BDNF-203ENST00000395978 STX8Q9UNK0 236 aa7.52□□□□□ -1.21
BDNF-203ENST00000395978 ANKRD26Q9UPS8 1709 aa7.52□□□□□ -1.21
BDNF-203ENST00000395978 C6orf229H3BNL8 230 aa7.52□□□□□ -1.21
BDNF-203ENST00000395978 ADD2P35612 726 aa7.52□□□□□ -1.21
BDNF-203ENST00000395978 SLFNL1Q499Z3 407 aa7.52□□□□□ -1.21
BDNF-203ENST00000395978 CCDC178Q5BJE1 867 aa7.52□□□□□ -1.21
BDNF-203ENST00000395978 ATG9AQ7Z3C6 839 aa7.52□□□□□ -1.21
BDNF-203ENST00000395978 GOLGA6L1Q8N7Z2 621 aa7.52□□□□□ -1.21
BDNF-203ENST00000395978 PUS7LQ9H0K6 701 aaKnown RBP7.52□□□□□ -1.21
BDNF-203ENST00000395978 IFNKQ9P0W0 207 aa7.52□□□□□ -1.21
BDNF-203ENST00000395978 HIBADHP31937 336 aaKnown RBP7.52□□□□□ -1.21
BDNF-203ENST00000395978 UBA7P41226 1012 aa7.52□□□□□ -1.21
BDNF-203ENST00000395978 RFX5P48382 616 aaPredicted RBP7.52□□□□□ -1.21
BDNF-203ENST00000395978 BCAMP50895 628 aa7.52□□□□□ -1.21
BDNF-203ENST00000395978 RESTQ13127 1097 aa7.52□□□□□ -1.21
BDNF-203ENST00000395978 PPP2R5BQ15173 497 aa7.52□□□□□ -1.21
BDNF-203ENST00000395978 SLC4A8Q2Y0W8 1093 aa7.52□□□□□ -1.21
BDNF-203ENST00000395978 UBXN4Q92575 508 aa7.52□□□□□ -1.21
BDNF-203ENST00000395978 CUTAO60888 179 aa7.51□□□□□ -1.21
BDNF-203ENST00000395978 SNW1Q13573 536 aaKnown RBP7.51□□□□□ -1.21
BDNF-203ENST00000395978 ZNF771Q7L3S4 317 aaPredicted RBP7.51□□□□□ -1.21
BDNF-203ENST00000395978 MCM9Q9NXL9 1143 aa7.51□□□□□ -1.21
BDNF-203ENST00000395978 KCNH3Q9ULD8 1083 aa7.51□□□□□ -1.21
BDNF-203ENST00000395978 PCDHA7Q9UN72 937 aa7.51□□□□□ -1.21
BDNF-203ENST00000395978 OVOS2A0A0G2JMS6 1433 aa7.51□□□□□ -1.21
BDNF-203ENST00000395978 AFMP43652 599 aa7.51□□□□□ -1.21
BDNF-203ENST00000395978 CRKLP46109 303 aaKnown RBP7.51□□□□□ -1.21
BDNF-203ENST00000395978 MYL5Q02045 173 aa7.51□□□□□ -1.21
BDNF-203ENST00000395978 HLFQ16534 295 aa7.51□□□□□ -1.21
BDNF-203ENST00000395978 USPL1Q5W0Q7 1092 aa7.51□□□□□ -1.21
BDNF-203ENST00000395978 C17orf53Q8N3J3 647 aaPredicted RBP7.51□□□□□ -1.21
BDNF-203ENST00000395978 CCDC12Q8WUD4 166 aaPredicted RBP7.51□□□□□ -1.21
BDNF-203ENST00000395978 PDLIM2Q96JY6 352 aa7.51□□□□□ -1.21
BDNF-203ENST00000395978 CABP5Q9NP86 173 aa7.51□□□□□ -1.21
BDNF-203ENST00000395978 RTEL1Q9NZ71 1219 aa7.51□□□□□ -1.21
BDNF-203ENST00000395978 ZMYM6O95789 1325 aa7.51□□□□□ -1.21
BDNF-203ENST00000395978 GNPATO15228 680 aa7.51□□□□□ -1.21
BDNF-203ENST00000395978 URI1O94763 535 aaPredicted RBP7.51□□□□□ -1.21
BDNF-203ENST00000395978 CALML3P27482 149 aa7.51□□□□□ -1.21
BDNF-203ENST00000395978 KRT2P35908 639 aa7.51□□□□□ -1.21
BDNF-203ENST00000395978 RBM28Q9NW13 759 aaKnown RBP7.51□□□□□ -1.21
BDNF-203ENST00000395978 KIAA1468Q9P260 1216 aa7.51□□□□□ -1.21
BDNF-203ENST00000395978 MRVI1Q9Y6F6 885 aa7.51□□□□□ -1.21
BDNF-203ENST00000395978 SETD1AO15047 1707 aaKnown RBP7.5□□□□□ -1.21
BDNF-203ENST00000395978 A0A1W2PQ27 194 aa7.5□□□□□ -1.21
BDNF-203ENST00000395978 A0A1W2PQ64 194 aa7.5□□□□□ -1.21
BDNF-203ENST00000395978 A0A1W2PQD8 194 aa7.5□□□□□ -1.21
BDNF-203ENST00000395978 UBAP1LF5GYI3 381 aa7.5□□□□□ -1.21
BDNF-203ENST00000395978 PRDM1O75626 825 aa7.5□□□□□ -1.21
BDNF-203ENST00000395978 TSPY3P0CV98 308 aa7.5□□□□□ -1.21
BDNF-203ENST00000395978 TSPY8P0CW00 308 aa7.5□□□□□ -1.21
BDNF-203ENST00000395978 RPS8P62241 208 aaKnown RBP7.5□□□□□ -1.21
BDNF-203ENST00000395978 ARHGAP29Q52LW3 1261 aa7.5□□□□□ -1.21
BDNF-203ENST00000395978 TEX35Q5T0J7 233 aa7.5□□□□□ -1.21
BDNF-203ENST00000395978 DHX58Q96C10 678 aa7.5□□□□□ -1.21
BDNF-203ENST00000395978 ZMYND15Q9H091 742 aa7.5□□□□□ -1.21
BDNF-203ENST00000395978 BMP2KQ9NSY1 1161 aaPredicted RBP7.5□□□□□ -1.21
BDNF-203ENST00000395978 TCP11L1Q9NUJ3 509 aa7.5□□□□□ -1.21
BDNF-203ENST00000395978 V9GY48 417 aaPredicted RBP7.5□□□□□ -1.21
BDNF-203ENST00000395978 CARMIL3Q8ND23 1372 aa7.5□□□□□ -1.21
BDNF-203ENST00000395978 CHD2O14647 1828 aaKnown RBP7.5□□□□□ -1.21
BDNF-203ENST00000395978 CMA1P23946 247 aa7.5□□□□□ -1.21
BDNF-203ENST00000395978 HSP90AA4PQ58FG1 418 aa7.5□□□□□ -1.21
BDNF-203ENST00000395978 APOA5Q6Q788 366 aa7.5□□□□□ -1.21
BDNF-203ENST00000395978 ZSCAN29Q8IWY8 852 aaPredicted RBP7.5□□□□□ -1.21
BDNF-203ENST00000395978 SYNE4Q8N205 404 aa7.5□□□□□ -1.21
BDNF-203ENST00000395978 CPLX3Q8WVH0 158 aa7.5□□□□□ -1.21
BDNF-203ENST00000395978 ERCC4Q92889 916 aaPredicted RBP7.5□□□□□ -1.21
BDNF-203ENST00000395978 KRT18P05783 430 aaKnown RBP7.5□□□□□ -1.21
BDNF-203ENST00000395978 LDHBP07195 334 aaKnown RBP7.5□□□□□ -1.21
BDNF-203ENST00000395978 RBM5P52756 815 aaKnown RBP eCLIP7.5□□□□□ -1.21
BDNF-203ENST00000395978 CHRNDQ07001 517 aa7.5□□□□□ -1.21
BDNF-203ENST00000395978 ZNF804AQ7Z570 1209 aa7.5□□□□□ -1.21
BDNF-203ENST00000395978 KCNB2Q92953 911 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms