RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 FAM160A1Q05DH4 1040 aa18.01■□□□□ 0.47
CPSF7-202ENST00000394888 TTF1Q15361 905 aaPredicted RBP18.01■□□□□ 0.47
CPSF7-202ENST00000394888 MYSM1Q5VVJ2 828 aa18.01■□□□□ 0.47
CPSF7-202ENST00000394888 NBPF11Q86T75 865 aa18.01■□□□□ 0.47
CPSF7-202ENST00000394888 AMIGO3Q86WK7 504 aa18.01■□□□□ 0.47
CPSF7-202ENST00000394888 BCL2L12Q9HB09 334 aa18.01■□□□□ 0.47
CPSF7-202ENST00000394888 ANGEL1Q9UNK9 670 aaKnown RBP18.01■□□□□ 0.47
CPSF7-202ENST00000394888 IRS2Q9Y4H2 1338 aa18.01■□□□□ 0.47
CPSF7-202ENST00000394888 SARM1Q6SZW1 724 aa18.01■□□□□ 0.47
CPSF7-202ENST00000394888 ZSWIM5Q9P217 1185 aa18.01■□□□□ 0.47
CPSF7-202ENST00000394888 A0A1W2PQ27 194 aa18■□□□□ 0.47
CPSF7-202ENST00000394888 A0A1W2PQ64 194 aa18■□□□□ 0.47
CPSF7-202ENST00000394888 A0A1W2PQD8 194 aa18■□□□□ 0.47
CPSF7-202ENST00000394888 ADALQ6DHV7 355 aa18■□□□□ 0.47
CPSF7-202ENST00000394888 IFNL3Q8IZI9 196 aa18■□□□□ 0.47
CPSF7-202ENST00000394888 LINC00116Q8NCU8 138 aa18■□□□□ 0.47
CPSF7-202ENST00000394888 BICD2Q8TD16 824 aa18■□□□□ 0.47
CPSF7-202ENST00000394888 PTGS1P23219 599 aa18■□□□□ 0.47
CPSF7-202ENST00000394888 CTDSPL2Q05D32 466 aa18■□□□□ 0.47
CPSF7-202ENST00000394888 PNPLA7Q6ZV29 1317 aa18■□□□□ 0.47
CPSF7-202ENST00000394888 IDH1O75874 414 aaKnown RBP18■□□□□ 0.47
CPSF7-202ENST00000394888 SMIM5Q71RC9 77 aa18■□□□□ 0.47
CPSF7-202ENST00000394888 LRMPQ12912 555 aa17.99■□□□□ 0.47
CPSF7-202ENST00000394888 SLC51AQ86UW1 340 aa17.99■□□□□ 0.47
CPSF7-202ENST00000394888 MAGEB6Q8N7X4 407 aa17.99■□□□□ 0.47
CPSF7-202ENST00000394888 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.99■□□□□ 0.474e-7■■■□□ 16.7
CPSF7-202ENST00000394888 ARMT1Q9H993 441 aa17.99■□□□□ 0.47
CPSF7-202ENST00000394888 HPSEQ9Y251 543 aa17.99■□□□□ 0.47
CPSF7-202ENST00000394888 FAM237AA0A1B0GTK4 181 aa17.99■□□□□ 0.47
CPSF7-202ENST00000394888 PATL2C9JE40 543 aaKnown RBP17.99■□□□□ 0.47
CPSF7-202ENST00000394888 GUCY1A2P33402 732 aa17.99■□□□□ 0.47
CPSF7-202ENST00000394888 ATP6V1AP38606 617 aa17.99■□□□□ 0.47
CPSF7-202ENST00000394888 BARGINQ6ZT62 677 aa17.99■□□□□ 0.47
CPSF7-202ENST00000394888 ORC3Q9UBD5 711 aaPredicted RBP17.99■□□□□ 0.47
CPSF7-202ENST00000394888 UQCRFS1P1P0C7P4 283 aa17.98■□□□□ 0.47
CPSF7-202ENST00000394888 ZNF165P49910 485 aa17.98■□□□□ 0.47
CPSF7-202ENST00000394888 FGD1P98174 961 aa17.98■□□□□ 0.47
CPSF7-202ENST00000394888 EVX2Q03828 476 aa17.98■□□□□ 0.47
CPSF7-202ENST00000394888 SPC24Q8NBT2 197 aa17.98■□□□□ 0.47
CPSF7-202ENST00000394888 MYL10Q9BUA6 226 aa17.98■□□□□ 0.47
CPSF7-202ENST00000394888 A0A1B0GVL5 298 aa17.98■□□□□ 0.47
CPSF7-202ENST00000394888 MBD4O95243 580 aa17.98■□□□□ 0.47
CPSF7-202ENST00000394888 POLR3DP05423 398 aaPredicted RBP17.98■□□□□ 0.47
CPSF7-202ENST00000394888 U2AF2P26368 475 aaKnown RBP eCLIP17.98■□□□□ 0.471e-6■■■□□ 18.8
CPSF7-202ENST00000394888 PHKBQ93100 1093 aa17.98■□□□□ 0.47
CPSF7-202ENST00000394888 UTP14AQ9BVJ6 771 aaKnown RBP17.98■□□□□ 0.47
CPSF7-202ENST00000394888 CHRNDQ07001 517 aa17.97■□□□□ 0.47
CPSF7-202ENST00000394888 LRRFIP1Q32MZ4 808 aaKnown RBP17.97■□□□□ 0.47
CPSF7-202ENST00000394888 YEATS4O95619 227 aa17.97■□□□□ 0.47
CPSF7-202ENST00000394888 CDC25BP30305 580 aa17.97■□□□□ 0.47
CPSF7-202ENST00000394888 GTF2F1P35269 517 aaKnown RBP eCLIP17.97■□□□□ 0.475e-10■■■■■ 57.2
CPSF7-202ENST00000394888 DDB1Q16531 1140 aa17.96■□□□□ 0.47
CPSF7-202ENST00000394888 FSIP1Q8NA03 581 aa17.96■□□□□ 0.47
CPSF7-202ENST00000394888 C8orf76Q96K31 380 aa17.96■□□□□ 0.47
CPSF7-202ENST00000394888 ARID5BQ14865 1188 aa17.96■□□□□ 0.47
CPSF7-202ENST00000394888 NCAPHQ15003 741 aa17.96■□□□□ 0.47
CPSF7-202ENST00000394888 ZSCAN25Q6NSZ9 544 aa17.96■□□□□ 0.47
CPSF7-202ENST00000394888 SHC4Q6S5L8 630 aa17.96■□□□□ 0.47
CPSF7-202ENST00000394888 STAG1Q8WVM7 1258 aa17.96■□□□□ 0.47
CPSF7-202ENST00000394888 RIOK1Q9BRS2 568 aaKnown RBP17.96■□□□□ 0.47
CPSF7-202ENST00000394888 LTBP1Q14766 1721 aa17.96■□□□□ 0.47
CPSF7-202ENST00000394888 TOB1P50616 345 aaPredicted RBP17.96■□□□□ 0.47
CPSF7-202ENST00000394888 ZNF710Q8N1W2 664 aa17.96■□□□□ 0.47
CPSF7-202ENST00000394888 LIFRP42702 1097 aa17.95■□□□□ 0.46
CPSF7-202ENST00000394888 FOCADQ5VW36 1801 aa17.95■□□□□ 0.46
CPSF7-202ENST00000394888 SASS6Q6UVJ0 657 aa17.95■□□□□ 0.46
CPSF7-202ENST00000394888 CDCA7Q9BWT1 371 aaPredicted RBP17.95■□□□□ 0.46
CPSF7-202ENST00000394888 KLRK1P26718 216 aa17.95■□□□□ 0.46
CPSF7-202ENST00000394888 BRAPQ7Z569 592 aa17.95■□□□□ 0.46
CPSF7-202ENST00000394888 CACTINQ8WUQ7 758 aaKnown RBP17.95■□□□□ 0.46
CPSF7-202ENST00000394888 MRPS27Q92552 414 aaKnown RBP17.95■□□□□ 0.46
CPSF7-202ENST00000394888 ZNF396Q96N95 335 aaPredicted RBP17.95■□□□□ 0.46
CPSF7-202ENST00000394888 UBR3Q6ZT12 1888 aa17.94■□□□□ 0.46
CPSF7-202ENST00000394888 SEC23AQ15436 765 aa17.94■□□□□ 0.46
CPSF7-202ENST00000394888 DPCR1Q3MIW9 517 aa17.94■□□□□ 0.46
CPSF7-202ENST00000394888 ERFEQ4G0M1 354 aa17.94■□□□□ 0.46
CPSF7-202ENST00000394888 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.94■□□□□ 0.46
CPSF7-202ENST00000394888 STK36Q9NRP7 1315 aa17.94■□□□□ 0.46
CPSF7-202ENST00000394888 UQCRHLA0A096LP55 91 aa17.94■□□□□ 0.46
CPSF7-202ENST00000394888 FAM177BA6PVY3 158 aa17.94■□□□□ 0.46
CPSF7-202ENST00000394888 UQCRHP07919 91 aa17.94■□□□□ 0.46
CPSF7-202ENST00000394888 KCNQ4P56696 695 aa17.94■□□□□ 0.46
CPSF7-202ENST00000394888 VPS37DQ86XT2 251 aa17.94■□□□□ 0.46
CPSF7-202ENST00000394888 ADAMTS2O95450 1211 aa17.94■□□□□ 0.46
CPSF7-202ENST00000394888 PTMAP06454 111 aaKnown RBP17.94■□□□□ 0.46
CPSF7-202ENST00000394888 SLC39A14Q15043 492 aa17.94■□□□□ 0.46
CPSF7-202ENST00000394888 PARP10Q53GL7 1025 aa17.94■□□□□ 0.46
CPSF7-202ENST00000394888 ANO1Q5XXA6 986 aa17.94■□□□□ 0.46
CPSF7-202ENST00000394888 KRT40Q6A162 431 aa17.94■□□□□ 0.46
CPSF7-202ENST00000394888 TMEM87BQ96K49 555 aa17.94■□□□□ 0.46
CPSF7-202ENST00000394888 SLC5A1P13866 664 aa17.93■□□□□ 0.46
CPSF7-202ENST00000394888 MYRIPQ8NFW9 859 aa17.93■□□□□ 0.46
CPSF7-202ENST00000394888 NAP1L2Q9ULW6 460 aaPredicted RBP17.93■□□□□ 0.46
CPSF7-202ENST00000394888 GOLGB1Q14789 3259 aaKnown RBP17.93■□□□□ 0.46
CPSF7-202ENST00000394888 FUT2Q10981 343 aa17.93■□□□□ 0.46
CPSF7-202ENST00000394888 STX1AQ16623 288 aa17.93■□□□□ 0.46
CPSF7-202ENST00000394888 CCDC186Q7Z3E2 898 aa17.93■□□□□ 0.46
CPSF7-202ENST00000394888 NIP7Q9Y221 180 aaKnown RBP eCLIP17.93■□□□□ 0.46
CPSF7-202ENST00000394888 ME1P48163 572 aa17.93■□□□□ 0.46
CPSF7-202ENST00000394888 METAP2P50579 478 aaKnown RBP eCLIP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms