RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 ERC1Q8IUD2 1116 aa37.77■■■■□ 3.64
CMTM4-202ENST00000394106 CA12O43570 354 aa37.76■■■■□ 3.64
CMTM4-202ENST00000394106 HMMRO75330 724 aa37.76■■■■□ 3.64
CMTM4-202ENST00000394106 IREB2P48200 963 aaKnown RBP37.76■■■■□ 3.64
CMTM4-202ENST00000394106 FKBP1CQ5VVH2 108 aa37.76■■■■□ 3.64
CMTM4-202ENST00000394106 TBC1D9Q6ZT07 1266 aa37.76■■■■□ 3.64
CMTM4-202ENST00000394106 CCDC8Q9H0W5 538 aaPredicted RBP37.76■■■■□ 3.64
CMTM4-202ENST00000394106 USP2O75604 605 aaPredicted RBP37.75■■■■□ 3.63
CMTM4-202ENST00000394106 HSP90AB4PQ58FF6 505 aa37.75■■■■□ 3.63
CMTM4-202ENST00000394106 FAM83AQ86UY5 434 aa37.75■■■■□ 3.63
CMTM4-202ENST00000394106 CSRNP1Q96S65 589 aa37.75■■■■□ 3.63
CMTM4-202ENST00000394106 USP40Q9NVE5 1235 aa37.75■■■■□ 3.63
CMTM4-202ENST00000394106 TLR7Q9NYK1 1049 aaKnown RBP37.75■■■■□ 3.63
CMTM4-202ENST00000394106 SLF2Q8IX21 1173 aa37.74■■■■□ 3.63
CMTM4-202ENST00000394106 SIRT2Q8IXJ6 389 aa37.74■■■■□ 3.63
CMTM4-202ENST00000394106 EAF2Q96CJ1 260 aaPredicted RBP37.74■■■■□ 3.63
CMTM4-202ENST00000394106 SLC10A4Q96EP9 437 aa37.74■■■■□ 3.63
CMTM4-202ENST00000394106 CLMNQ96JQ2 1002 aa37.74■■■■□ 3.63
CMTM4-202ENST00000394106 SNRKQ9NRH2 765 aa37.74■■■■□ 3.63
CMTM4-202ENST00000394106 DBNLQ9UJU6 430 aaKnown RBP37.74■■■■□ 3.63
CMTM4-202ENST00000394106 APBB1O00213 710 aa37.72■■■■□ 3.63
CMTM4-202ENST00000394106 MECOMQ03112 1051 aa37.72■■■■□ 3.63
CMTM4-202ENST00000394106 TNS4Q8IZW8 715 aa37.72■■■■□ 3.63
CMTM4-202ENST00000394106 GAKO14976 1311 aa37.71■■■■□ 3.63
CMTM4-202ENST00000394106 RAI14Q9P0K7 980 aa37.71■■■■□ 3.63
CMTM4-202ENST00000394106 AKAP11Q9UKA4 1901 aa37.71■■■■□ 3.63
CMTM4-202ENST00000394106 TCP10Q12799 353 aa37.7■■■■□ 3.63
CMTM4-202ENST00000394106 AACSQ86V21 672 aa37.7■■■■□ 3.63
CMTM4-202ENST00000394106 REM2Q8IYK8 340 aaPredicted RBP37.7■■■■□ 3.63
CMTM4-202ENST00000394106 OTOFQ9HC10 1997 aa37.69■■■■□ 3.62
CMTM4-202ENST00000394106 NFIAQ12857 509 aa37.69■■■■□ 3.62
CMTM4-202ENST00000394106 SPRYD7Q5W111 196 aa37.69■■■■□ 3.62
CMTM4-202ENST00000394106 RHPN1Q8TCX5 695 aa37.69■■■■□ 3.62
CMTM4-202ENST00000394106 IL1RAPL2Q9NP60 686 aa37.69■■■■□ 3.62
CMTM4-202ENST00000394106 LRP2BPQ9P2M1 347 aa37.69■■■■□ 3.62
CMTM4-202ENST00000394106 MROH7-TTC4A0A0A0MT08 1334 aa37.68■■■■□ 3.62
CMTM4-202ENST00000394106 ANKRD13AQ8IZ07 590 aa37.68■■■■□ 3.62
CMTM4-202ENST00000394106 UNCXA6NJT0 531 aa37.67■■■■□ 3.62
CMTM4-202ENST00000394106 BTDP43251 543 aa37.67■■■■□ 3.62
CMTM4-202ENST00000394106 ZNF384Q8TF68 577 aa37.67■■■■□ 3.62
CMTM4-202ENST00000394106 FAM151AQ8WW52 585 aa37.67■■■■□ 3.62
CMTM4-202ENST00000394106 FAM163AQ96GL9 167 aaPredicted RBP37.67■■■■□ 3.62
CMTM4-202ENST00000394106 RNF186Q9NXI6 227 aa37.67■■■■□ 3.62
CMTM4-202ENST00000394106 RPAP1Q9BWH6 1393 aaPredicted RBP37.67■■■■□ 3.62
CMTM4-202ENST00000394106 TRPA1O75762 1119 aa37.66■■■■□ 3.62
CMTM4-202ENST00000394106 GSTO1P78417 241 aa37.66■■■■□ 3.62
CMTM4-202ENST00000394106 NSUN4Q96CB9 384 aaKnown RBP37.66■■■■□ 3.62
CMTM4-202ENST00000394106 ZNF512BQ96KM6 892 aaPredicted RBP37.66■■■■□ 3.62
CMTM4-202ENST00000394106 BCL11AQ9H165 835 aa37.66■■■■□ 3.62
CMTM4-202ENST00000394106 HOOK2Q96ED9 719 aa37.65■■■■□ 3.62
CMTM4-202ENST00000394106 WNK4Q96J92 1243 aa37.65■■■■□ 3.62
CMTM4-202ENST00000394106 SAGE1Q9NXZ1 904 aa37.65■■■■□ 3.62
CMTM4-202ENST00000394106 FAM198AQ9UFP1 575 aa37.65■■■■□ 3.62
CMTM4-202ENST00000394106 AK9Q5TCS8 1911 aa37.65■■■■□ 3.62
CMTM4-202ENST00000394106 KIF1BPQ96EK5 621 aa37.64■■■■□ 3.62
CMTM4-202ENST00000394106 LDHCP07864 332 aa37.63■■■■□ 3.61
CMTM4-202ENST00000394106 ZAP70P43403 619 aa37.63■■■■□ 3.61
CMTM4-202ENST00000394106 ELP3Q9H9T3 547 aa37.63■■■■□ 3.61
CMTM4-202ENST00000394106 CYP2E1P05181 493 aaPredicted RBP37.62■■■■□ 3.61
CMTM4-202ENST00000394106 GPR75-ASB3A0A0A6YYF3 556 aa37.61■■■■□ 3.61
CMTM4-202ENST00000394106 RGS3P49796 1198 aa37.61■■■■□ 3.61
CMTM4-202ENST00000394106 RRP1P56182 461 aaKnown RBP37.61■■■■□ 3.61
CMTM4-202ENST00000394106 MAP3K9P80192 1104 aa37.61■■■■□ 3.61
CMTM4-202ENST00000394106 SREBF2Q12772 1141 aa37.61■■■■□ 3.61
CMTM4-202ENST00000394106 DCAF15Q66K64 600 aa37.61■■■■□ 3.61
CMTM4-202ENST00000394106 PPP1R3FQ6ZSY5 799 aaPredicted RBP37.61■■■■□ 3.61
CMTM4-202ENST00000394106 CLASRPQ8N2M8 674 aaKnown RBP37.61■■■■□ 3.61
CMTM4-202ENST00000394106 DDX55Q8NHQ9 600 aaKnown RBP eCLIP37.61■■■■□ 3.61
CMTM4-202ENST00000394106 RAB11FIP3O75154 756 aa37.6■■■■□ 3.61
CMTM4-202ENST00000394106 ZBTB48P10074 688 aaPredicted RBP37.6■■■■□ 3.61
CMTM4-202ENST00000394106 MIGA2Q7L4E1 593 aa37.6■■■■□ 3.61
CMTM4-202ENST00000394106 ZFPM1Q8IX07 1006 aa37.6■■■■□ 3.61
CMTM4-202ENST00000394106 IDI2Q9BXS1 227 aa37.6■■■■□ 3.61
CMTM4-202ENST00000394106 CSADQ9Y600 493 aa37.6■■■■□ 3.61
CMTM4-202ENST00000394106 MAST2Q6P0Q8 1798 aa37.6■■■■□ 3.61
CMTM4-202ENST00000394106 TM4SF4P48230 202 aa37.59■■■■□ 3.61
CMTM4-202ENST00000394106 VGLL4Q14135 290 aa37.59■■■■□ 3.61
CMTM4-202ENST00000394106 WRNIP1Q96S55 665 aa37.59■■■■□ 3.61
CMTM4-202ENST00000394106 PICALMQ13492 652 aa37.58■■■■□ 3.61
CMTM4-202ENST00000394106 PIH1D3Q9NQM4 214 aaKnown RBP37.58■■■■□ 3.61
CMTM4-202ENST00000394106 MYO5AQ9Y4I1 1855 aaKnown RBP37.58■■■■□ 3.61
CMTM4-202ENST00000394106 RFX7Q2KHR2 1363 aa37.57■■■■□ 3.61
CMTM4-202ENST00000394106 ENTPD3O75355 529 aa37.57■■■■□ 3.6
CMTM4-202ENST00000394106 WDHD1O75717 1129 aaPredicted RBP37.57■■■■□ 3.6
CMTM4-202ENST00000394106 GJA5P36382 358 aa37.57■■■■□ 3.6
CMTM4-202ENST00000394106 NAA16Q6N069 864 aaPredicted RBP37.57■■■■□ 3.6
CMTM4-202ENST00000394106 OPTNQ96CV9 577 aa37.57■■■■□ 3.6
CMTM4-202ENST00000394106 MANSC4A6NHS7 340 aaPredicted RBP37.56■■■■□ 3.6
CMTM4-202ENST00000394106 IFIT2P09913 472 aaKnown RBP37.56■■■■□ 3.6
CMTM4-202ENST00000394106 RHBDL3P58872 404 aa37.56■■■■□ 3.6
CMTM4-202ENST00000394106 ZNF341Q9BYN7 854 aa37.56■■■■□ 3.6
CMTM4-202ENST00000394106 NDUFB9Q9Y6M9 179 aa37.56■■■■□ 3.6
CMTM4-202ENST00000394106 CASP8AP2Q9UKL3 1982 aa37.56■■■■□ 3.6
CMTM4-202ENST00000394106 ZSCAN29Q8IWY8 852 aaPredicted RBP37.55■■■■□ 3.6
CMTM4-202ENST00000394106 NOL10Q9BSC4 688 aaKnown RBP37.55■■■■□ 3.6
CMTM4-202ENST00000394106 DDX4Q9NQI0 724 aaKnown RBP37.55■■■■□ 3.6
CMTM4-202ENST00000394106 CNKSR2Q8WXI2 1034 aa37.54■■■■□ 3.6
CMTM4-202ENST00000394106 ZKSCAN4Q969J2 545 aaPredicted RBP37.54■■■■□ 3.6
CMTM4-202ENST00000394106 DOCK2Q92608 1830 aa37.53■■■■□ 3.6
CMTM4-202ENST00000394106 LAMB1P07942 1786 aa37.51■■■■□ 3.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms