RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 NFE2Q16621 373 aaPredicted RBP4.24□□□□□ -1.73
XRN1-202ENST00000392981 SPECC1Q5M775 1068 aa4.24□□□□□ -1.73
XRN1-202ENST00000392981 ARMC3Q5W041 872 aa4.24□□□□□ -1.73
XRN1-202ENST00000392981 LMBRD2Q68DH5 695 aaPredicted RBP4.24□□□□□ -1.73
XRN1-202ENST00000392981 CENPOQ9BU64 300 aa4.24□□□□□ -1.73
XRN1-202ENST00000392981 DNAJC25Q9H1X3 360 aa4.24□□□□□ -1.73
XRN1-202ENST00000392981 PLCB1Q9NQ66 1216 aa4.24□□□□□ -1.73
XRN1-202ENST00000392981 PRDM9Q9NQV7 894 aa4.24□□□□□ -1.73
XRN1-202ENST00000392981 C9orf78Q9NZ63 289 aaPredicted RBP4.24□□□□□ -1.73
XRN1-202ENST00000392981 hCG_1642624A0A1W2PR95 340 aa4.24□□□□□ -1.73
XRN1-202ENST00000392981 RNASEH2AO75792 299 aaKnown RBP4.24□□□□□ -1.73
XRN1-202ENST00000392981 STAT3P40763 770 aa4.24□□□□□ -1.73
XRN1-202ENST00000392981 EEPD1Q7L9B9 569 aa4.24□□□□□ -1.73
XRN1-202ENST00000392981 ELAC2Q9BQ52 826 aaKnown RBP4.24□□□□□ -1.73
XRN1-202ENST00000392981 ZFATQ9P243 1243 aa4.24□□□□□ -1.73
XRN1-202ENST00000392981 LRFN2Q9ULH4 789 aa4.24□□□□□ -1.73
XRN1-202ENST00000392981 CCDC163A0A0D9SF12 145 aa4.24□□□□□ -1.73
XRN1-202ENST00000392981 KLF4O43474 513 aa4.24□□□□□ -1.73
XRN1-202ENST00000392981 PQBP1O60828 265 aaKnown RBP4.24□□□□□ -1.73
XRN1-202ENST00000392981 TMEM127O75204 238 aa4.24□□□□□ -1.73
XRN1-202ENST00000392981 RLBP1P12271 317 aa4.24□□□□□ -1.73
XRN1-202ENST00000392981 ATICP31939 592 aa4.24□□□□□ -1.73
XRN1-202ENST00000392981 VPS72Q15906 364 aa4.24□□□□□ -1.73
XRN1-202ENST00000392981 JAKMIP3Q5VZ66 844 aa4.24□□□□□ -1.73
XRN1-202ENST00000392981 KIAA0907Q7Z7F0 614 aaPredicted RBP4.24□□□□□ -1.73
XRN1-202ENST00000392981 IFNL2Q8IZJ0 200 aa4.24□□□□□ -1.73
XRN1-202ENST00000392981 PI4K2BQ8TCG2 481 aa4.24□□□□□ -1.73
XRN1-202ENST00000392981 TARS2Q9BW92 718 aaKnown RBP4.24□□□□□ -1.73
XRN1-202ENST00000392981 APOL5Q9BWW9 433 aa4.24□□□□□ -1.73
XRN1-202ENST00000392981 AVENQ9NQS1 362 aaPredicted RBP4.24□□□□□ -1.73
XRN1-202ENST00000392981 KLHL3Q9UH77 587 aa4.24□□□□□ -1.73
XRN1-202ENST00000392981 USP31Q70CQ4 1352 aa4.24□□□□□ -1.73
XRN1-202ENST00000392981 IQCA1LA6NCM1 817 aa4.24□□□□□ -1.73
XRN1-202ENST00000392981 SAFBQ15424 915 aaKnown RBP eCLIP4.24□□□□□ -1.73
XRN1-202ENST00000392981 TTBK2Q6IQ55 1244 aa4.24□□□□□ -1.73
XRN1-202ENST00000392981 FBXL19Q6PCT2 694 aa4.24□□□□□ -1.73
XRN1-202ENST00000392981 FAM186BQ8IYM0 893 aa4.24□□□□□ -1.73
XRN1-202ENST00000392981 SLFN12Q8IYM2 578 aa4.24□□□□□ -1.73
XRN1-202ENST00000392981 FAM169BQ8N8A8 192 aa4.24□□□□□ -1.73
XRN1-202ENST00000392981 TRIM52Q96A61 297 aa4.24□□□□□ -1.73
XRN1-202ENST00000392981 TMPRSS4Q9NRS4 437 aa4.24□□□□□ -1.73
XRN1-202ENST00000392981 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.24□□□□□ -1.73
XRN1-202ENST00000392981 TRAK1Q9UPV9 953 aa4.24□□□□□ -1.73
XRN1-202ENST00000392981 ESPNB1AK53 854 aa4.23□□□□□ -1.73
XRN1-202ENST00000392981 PRPF3O43395 683 aaKnown RBP4.23□□□□□ -1.73
XRN1-202ENST00000392981 FSHRP23945 695 aa4.23□□□□□ -1.73
XRN1-202ENST00000392981 CYP2U1Q7Z449 544 aa4.23□□□□□ -1.73
XRN1-202ENST00000392981 SNX32Q86XE0 403 aa4.23□□□□□ -1.73
XRN1-202ENST00000392981 ALKBH8Q96BT7 664 aaKnown RBP4.23□□□□□ -1.73
XRN1-202ENST00000392981 CCDC113Q9H0I3 377 aa4.23□□□□□ -1.73
XRN1-202ENST00000392981 TMEM260Q9NX78 707 aa4.23□□□□□ -1.73
XRN1-202ENST00000392981 NRBP1Q9UHY1 535 aa4.23□□□□□ -1.73
XRN1-202ENST00000392981 MAGED1Q9Y5V3 778 aaPredicted RBP4.23□□□□□ -1.73
XRN1-202ENST00000392981 TRIM75PA6NK02 468 aa4.23□□□□□ -1.73
XRN1-202ENST00000392981 HAX1O00165 279 aa4.23□□□□□ -1.73
XRN1-202ENST00000392981 FLT3P36888 993 aa4.23□□□□□ -1.73
XRN1-202ENST00000392981 PABPC4Q13310 644 aaKnown RBP eCLIP4.23□□□□□ -1.73
XRN1-202ENST00000392981 CAMK2GQ13555 558 aaPredicted RBP4.23□□□□□ -1.73
XRN1-202ENST00000392981 RASGRF1Q13972 1273 aa4.23□□□□□ -1.73
XRN1-202ENST00000392981 IFIT1BQ5T764 474 aaKnown RBP4.23□□□□□ -1.73
XRN1-202ENST00000392981 SH3PXD2AQ5TCZ1 1133 aa4.23□□□□□ -1.73
XRN1-202ENST00000392981 PCNX4Q63HM2 1172 aa4.23□□□□□ -1.73
XRN1-202ENST00000392981 PRPF40BQ6NWY9 871 aaKnown RBP4.23□□□□□ -1.73
XRN1-202ENST00000392981 SHQ1Q6PI26 577 aaKnown RBP4.23□□□□□ -1.73
XRN1-202ENST00000392981 MYCBPQ99417 103 aaPredicted RBP4.23□□□□□ -1.73
XRN1-202ENST00000392981 AP1M1Q9BXS5 423 aa4.23□□□□□ -1.73
XRN1-202ENST00000392981 WASHC2CQ9Y4E1 1318 aa4.23□□□□□ -1.73
XRN1-202ENST00000392981 GOLIM4O00461 696 aa4.23□□□□□ -1.73
XRN1-202ENST00000392981 SLC34A2O95436 690 aa4.23□□□□□ -1.73
XRN1-202ENST00000392981 FAM153BP0C7A2 387 aa4.23□□□□□ -1.73
XRN1-202ENST00000392981 CCNFP41002 786 aa4.23□□□□□ -1.73
XRN1-202ENST00000392981 MLLT1Q03111 559 aaPredicted RBP4.23□□□□□ -1.73
XRN1-202ENST00000392981 MTMR1Q13613 665 aa4.23□□□□□ -1.73
XRN1-202ENST00000392981 COL9A2Q14055 689 aaPredicted RBP4.23□□□□□ -1.73
XRN1-202ENST00000392981 GNPTABQ3T906 1256 aa4.23□□□□□ -1.73
XRN1-202ENST00000392981 MINDY4Q4G0A6 757 aa4.23□□□□□ -1.73
XRN1-202ENST00000392981 SLC27A3Q5K4L6 730 aa4.23□□□□□ -1.73
XRN1-202ENST00000392981 FAAH2Q6GMR7 532 aa4.23□□□□□ -1.73
XRN1-202ENST00000392981 VHLLQ6RSH7 139 aa4.23□□□□□ -1.73
XRN1-202ENST00000392981 RUFY4Q6ZNE9 571 aa4.23□□□□□ -1.73
XRN1-202ENST00000392981 FAM178BQ8IXR5 827 aa4.23□□□□□ -1.73
XRN1-202ENST00000392981 FBXO27Q8NI29 283 aa4.23□□□□□ -1.73
XRN1-202ENST00000392981 NUDT16L1Q9BRJ7 211 aaKnown RBP4.23□□□□□ -1.73
XRN1-202ENST00000392981 CSRNP2Q9H175 543 aa4.23□□□□□ -1.73
XRN1-202ENST00000392981 BCL2L12Q9HB09 334 aa4.23□□□□□ -1.73
XRN1-202ENST00000392981 DEKP35659 375 aaKnown RBP4.23□□□□□ -1.73
XRN1-202ENST00000392981 DDX10Q13206 875 aaKnown RBP4.23□□□□□ -1.73
XRN1-202ENST00000392981 G3BP1Q13283 466 aaKnown RBP eCLIP4.23□□□□□ -1.73
XRN1-202ENST00000392981 LLGL1Q15334 1064 aa4.23□□□□□ -1.73
XRN1-202ENST00000392981 MAPRE1Q15691 268 aaKnown RBP4.23□□□□□ -1.73
XRN1-202ENST00000392981 CFAP100Q494V2 611 aa4.23□□□□□ -1.73
XRN1-202ENST00000392981 KIAA1211LQ6NV74 962 aa4.23□□□□□ -1.73
XRN1-202ENST00000392981 PIP4P2Q8N4L2 257 aa4.23□□□□□ -1.73
XRN1-202ENST00000392981 ELP3Q9H9T3 547 aa4.23□□□□□ -1.73
XRN1-202ENST00000392981 ARFGAP3Q9NP61 516 aa4.23□□□□□ -1.73
XRN1-202ENST00000392981 ERVH48-1M5A8F1 160 aa4.22□□□□□ -1.73
XRN1-202ENST00000392981 CHKAP35790 457 aa4.22□□□□□ -1.73
XRN1-202ENST00000392981 KCNJ6P48051 423 aa4.22□□□□□ -1.73
XRN1-202ENST00000392981 RENBPP51606 427 aa4.22□□□□□ -1.73
XRN1-202ENST00000392981 FAM98CQ17RN3 349 aaKnown RBP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms