RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 POTEJP0CG39 1038 aa19.44■□□□□ 0.7
SGCB-201ENST00000381431 RNF187Q5TA31 235 aaPredicted RBP19.44■□□□□ 0.7
SGCB-201ENST00000381431 ZNF532Q9HCE3 1301 aa19.44■□□□□ 0.7
SGCB-201ENST00000381431 CCDC94Q9BW85 323 aaPredicted RBP19.44■□□□□ 0.7
SGCB-201ENST00000381431 PDE8AO60658 829 aa19.43■□□□□ 0.7
SGCB-201ENST00000381431 LDHBP07195 334 aaKnown RBP19.43■□□□□ 0.7
SGCB-201ENST00000381431 ZNF853P0CG23 659 aa19.43■□□□□ 0.7
SGCB-201ENST00000381431 LETM2Q2VYF4 491 aa19.43■□□□□ 0.7
SGCB-201ENST00000381431 KRT79Q5XKE5 535 aa19.43■□□□□ 0.7
SGCB-201ENST00000381431 NFE2L3Q9Y4A8 694 aa19.43■□□□□ 0.7
SGCB-201ENST00000381431 KDM5AP29375 1690 aaKnown RBP19.43■□□□□ 0.7
SGCB-201ENST00000381431 DEXIO95424 95 aa19.43■□□□□ 0.7
SGCB-201ENST00000381431 LRMPQ12912 555 aa19.43■□□□□ 0.7
SGCB-201ENST00000381431 GOLGA1Q92805 767 aa19.43■□□□□ 0.7
SGCB-201ENST00000381431 LRRC27Q9C0I9 530 aa19.43■□□□□ 0.7
SGCB-201ENST00000381431 TLR7Q9NYK1 1049 aaKnown RBP19.43■□□□□ 0.7
SGCB-201ENST00000381431 PRAMEF22A3QJZ6 481 aa19.43■□□□□ 0.7
SGCB-201ENST00000381431 ADD1P35611 737 aaKnown RBP19.43■□□□□ 0.7
SGCB-201ENST00000381431 STAP2Q9UGK3 403 aa19.43■□□□□ 0.7
SGCB-201ENST00000381431 KRT86O43790 486 aa19.42■□□□□ 0.7
SGCB-201ENST00000381431 PIK3AP1Q6ZUJ8 805 aa19.42■□□□□ 0.7
SGCB-201ENST00000381431 ZC3H12CQ9C0D7 883 aaKnown RBP19.42■□□□□ 0.7
SGCB-201ENST00000381431 LRRC24Q50LG9 513 aa19.42■□□□□ 0.7
SGCB-201ENST00000381431 IGSF22Q8N9C0 903 aa19.42■□□□□ 0.7
SGCB-201ENST00000381431 ST5P78524 1137 aa19.42■□□□□ 0.7
SGCB-201ENST00000381431 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.42■□□□□ 0.7
SGCB-201ENST00000381431 UBE2Q2Q8WVN8 375 aa19.42■□□□□ 0.7
SGCB-201ENST00000381431 TACC1O75410 805 aa19.41■□□□□ 0.7
SGCB-201ENST00000381431 LSG1Q9H089 658 aaKnown RBP19.41■□□□□ 0.7
SGCB-201ENST00000381431 OSBPL3Q9H4L5 887 aa19.41■□□□□ 0.7
SGCB-201ENST00000381431 EVCP57679 992 aa19.41■□□□□ 0.7
SGCB-201ENST00000381431 AKR1B15C9JRZ8 316 aaPredicted RBP19.41■□□□□ 0.7
SGCB-201ENST00000381431 RIMBP2O15034 1052 aa19.41■□□□□ 0.7
SGCB-201ENST00000381431 MYSM1Q5VVJ2 828 aa19.41■□□□□ 0.7
SGCB-201ENST00000381431 WWC3Q9ULE0 1092 aa19.41■□□□□ 0.7
SGCB-201ENST00000381431 RTCBQ9Y3I0 505 aaKnown RBP19.41■□□□□ 0.7
SGCB-201ENST00000381431 TRMT44Q8IYL2 757 aaKnown RBP19.41■□□□□ 0.7
SGCB-201ENST00000381431 PPP1R9BQ96SB3 815 aa19.41■□□□□ 0.7
SGCB-201ENST00000381431 SAP30BPQ9UHR5 308 aaKnown RBP19.41■□□□□ 0.7
SGCB-201ENST00000381431 CKAP4Q07065 602 aaKnown RBP19.4■□□□□ 0.7
SGCB-201ENST00000381431 CMTR1Q8N1G2 835 aaKnown RBP19.4■□□□□ 0.7
SGCB-201ENST00000381431 ERMNQ8TAM6 284 aa19.4■□□□□ 0.7
SGCB-201ENST00000381431 LPIN2Q92539 896 aa19.4■□□□□ 0.7
SGCB-201ENST00000381431 RRP36Q96EU6 259 aaKnown RBP19.4■□□□□ 0.7
SGCB-201ENST00000381431 PRR36Q9H6K5 1346 aa19.4■□□□□ 0.7
SGCB-201ENST00000381431 TUBB4AP04350 444 aa19.4■□□□□ 0.7
SGCB-201ENST00000381431 HSPD1P10809 573 aaKnown RBP19.4■□□□□ 0.7
SGCB-201ENST00000381431 ZNF804AQ7Z570 1209 aa19.4■□□□□ 0.7
SGCB-201ENST00000381431 DSCC1Q9BVC3 393 aa19.4■□□□□ 0.7
SGCB-201ENST00000381431 DBNLQ9UJU6 430 aaKnown RBP19.4■□□□□ 0.7
SGCB-201ENST00000381431 CEP112Q8N8E3 955 aa19.4■□□□□ 0.7
SGCB-201ENST00000381431 TFCP2L1Q9NZI6 479 aa19.4■□□□□ 0.7
SGCB-201ENST00000381431 GNA11P29992 359 aa19.39■□□□□ 0.7
SGCB-201ENST00000381431 KRT83P78385 493 aa19.39■□□□□ 0.7
SGCB-201ENST00000381431 MAP2K1Q02750 393 aaPredicted RBP19.39■□□□□ 0.7
SGCB-201ENST00000381431 TCIRG1Q13488 830 aa19.39■□□□□ 0.7
SGCB-201ENST00000381431 MYRIPQ8NFW9 859 aa19.39■□□□□ 0.7
SGCB-201ENST00000381431 ADGBQ8N7X0 1667 aa19.39■□□□□ 0.7
SGCB-201ENST00000381431 FSD2A1L4K1 749 aa19.39■□□□□ 0.69
SGCB-201ENST00000381431 PHKG2P15735 406 aa19.39■□□□□ 0.69
SGCB-201ENST00000381431 CARD6Q9BX69 1037 aa19.39■□□□□ 0.69
SGCB-201ENST00000381431 PLXNC1O60486 1568 aa19.39■□□□□ 0.69
SGCB-201ENST00000381431 SAMD9LQ8IVG5 1584 aa19.39■□□□□ 0.69
SGCB-201ENST00000381431 GPIHBP1Q8IV16 184 aa19.39■□□□□ 0.69
SGCB-201ENST00000381431 CNGA4Q8IV77 575 aa19.39■□□□□ 0.69
SGCB-201ENST00000381431 CUTAO60888 179 aa19.39■□□□□ 0.69
SGCB-201ENST00000381431 XPO4Q9C0E2 1151 aaKnown RBP19.39■□□□□ 0.69
SGCB-201ENST00000381431 TARBP1Q13395 1621 aaKnown RBP19.38■□□□□ 0.69
SGCB-201ENST00000381431 GNPATO15228 680 aa19.38■□□□□ 0.69
SGCB-201ENST00000381431 ERCC3P19447 782 aa19.38■□□□□ 0.69
SGCB-201ENST00000381431 TBC1D8BQ0IIM8 1120 aa19.38■□□□□ 0.69
SGCB-201ENST00000381431 AATFQ9NY61 560 aaKnown RBP eCLIP19.38■□□□□ 0.69
SGCB-201ENST00000381431 EIF6P56537 245 aaKnown RBP19.38■□□□□ 0.69
SGCB-201ENST00000381431 STXBP4Q6ZWJ1 553 aa19.38■□□□□ 0.69
SGCB-201ENST00000381431 MAP4K1Q92918 833 aa19.38■□□□□ 0.69
SGCB-201ENST00000381431 ERO1AQ96HE7 468 aa19.38■□□□□ 0.69
SGCB-201ENST00000381431 DENND2AQ9ULE3 1009 aa19.38■□□□□ 0.69
SGCB-201ENST00000381431 CCDC122Q5T0U0 273 aa19.38■□□□□ 0.69
SGCB-201ENST00000381431 NYXQ9GZU5 481 aa19.38■□□□□ 0.69
SGCB-201ENST00000381431 CTNND2Q9UQB3 1225 aa19.38■□□□□ 0.69
SGCB-201ENST00000381431 SSH2Q76I76 1423 aa19.38■□□□□ 0.69
SGCB-201ENST00000381431 HIBADHP31937 336 aaKnown RBP19.37■□□□□ 0.69
SGCB-201ENST00000381431 ELF2Q15723 593 aa19.37■□□□□ 0.69
SGCB-201ENST00000381431 SPATA5Q8NB90 893 aa19.37■□□□□ 0.69
SGCB-201ENST00000381431 VPS54Q9P1Q0 977 aa19.37■□□□□ 0.69
SGCB-201ENST00000381431 AATKQ6ZMQ8 1374 aa19.37■□□□□ 0.69
SGCB-201ENST00000381431 FGAP02671 866 aa19.37■□□□□ 0.69
SGCB-201ENST00000381431 PPP2R3AQ06190 1150 aa19.37■□□□□ 0.69
SGCB-201ENST00000381431 SCLT1Q96NL6 688 aa19.37■□□□□ 0.69
SGCB-201ENST00000381431 IGSF1Q8N6C5 1336 aa19.37■□□□□ 0.69
SGCB-201ENST00000381431 CAPN2P17655 700 aa19.37■□□□□ 0.69
SGCB-201ENST00000381431 PUS3Q9BZE2 481 aaKnown RBP19.37■□□□□ 0.69
SGCB-201ENST00000381431 EHMT1Q9H9B1 1298 aa19.37■□□□□ 0.69
SGCB-201ENST00000381431 RSPH14Q9UHP6 348 aa19.37■□□□□ 0.69
SGCB-201ENST00000381431 KDRP35968 1356 aa19.37■□□□□ 0.69
SGCB-201ENST00000381431 GBP2P32456 591 aaPredicted RBP19.36■□□□□ 0.69
SGCB-201ENST00000381431 SMARCC2Q8TAQ2 1214 aa19.36■□□□□ 0.69
SGCB-201ENST00000381431 NLRP12P59046 1061 aa19.36■□□□□ 0.69
SGCB-201ENST00000381431 ZNF589Q86UQ0 364 aaPredicted RBP19.36■□□□□ 0.69
SGCB-201ENST00000381431 TEX11Q8IYF3 940 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms