RNA–Protein interactions for RNA: ENST00000380815.4

GMDS-202, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GMDS, Length 1,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-202ENST00000380815 LARP1BQ659C4 914 aaKnown RBP25.31■■□□□ 1.64
GMDS-202ENST00000380815 SDR42E1Q8WUS8 393 aa25.31■■□□□ 1.64
GMDS-202ENST00000380815 STAG1Q8WVM7 1258 aa25.31■■□□□ 1.64
GMDS-202ENST00000380815 NEDD4P46934 1319 aa25.31■■□□□ 1.64
GMDS-202ENST00000380815 LDHBP07195 334 aaKnown RBP25.31■■□□□ 1.64
GMDS-202ENST00000380815 DZIP1Q86YF9 867 aaKnown RBP25.31■■□□□ 1.64
GMDS-202ENST00000380815 SMARCC2Q8TAQ2 1214 aa25.31■■□□□ 1.64
GMDS-202ENST00000380815 KRT23Q9C075 422 aa25.31■■□□□ 1.64
GMDS-202ENST00000380815 JAG2Q9Y219 1238 aa25.31■■□□□ 1.64
GMDS-202ENST00000380815 DUOX1Q9NRD9 1551 aa25.3■■□□□ 1.64
GMDS-202ENST00000380815 F13A1P00488 732 aa25.3■■□□□ 1.64
GMDS-202ENST00000380815 CTDSPL2Q05D32 466 aa25.3■■□□□ 1.64
GMDS-202ENST00000380815 MFSD6Q6ZSS7 791 aa25.3■■□□□ 1.64
GMDS-202ENST00000380815 GPHNQ9NQX3 736 aaPredicted RBP25.3■■□□□ 1.64
GMDS-202ENST00000380815 LMBRD1Q9NUN5 540 aa25.3■■□□□ 1.64
GMDS-202ENST00000380815 ANAPC4Q9UJX5 808 aa25.3■■□□□ 1.64
GMDS-202ENST00000380815 ATP6V1DQ9Y5K8 247 aa25.3■■□□□ 1.64
GMDS-202ENST00000380815 COL11A2P13942 1736 aaPredicted RBP25.3■■□□□ 1.64
GMDS-202ENST00000380815 B4E1Z4 1266 aa25.29■■□□□ 1.64
GMDS-202ENST00000380815 C6orf229H3BNL8 230 aa25.29■■□□□ 1.64
GMDS-202ENST00000380815 PPARAQ07869 468 aa25.29■■□□□ 1.64
GMDS-202ENST00000380815 SF3B2Q13435 895 aaKnown RBP25.29■■□□□ 1.64
GMDS-202ENST00000380815 CYB5R4Q7L1T6 521 aa25.29■■□□□ 1.64
GMDS-202ENST00000380815 TMEM87BQ96K49 555 aa25.29■■□□□ 1.64
GMDS-202ENST00000380815 RNF41Q9H4P4 317 aaPredicted RBP25.29■■□□□ 1.64
GMDS-202ENST00000380815 ANGEL1Q9UNK9 670 aaKnown RBP25.29■■□□□ 1.64
GMDS-202ENST00000380815 KIAA1551Q9HCM1 1747 aa25.29■■□□□ 1.64
GMDS-202ENST00000380815 DTNBO60941 627 aa25.28■■□□□ 1.64
GMDS-202ENST00000380815 BAG6P46379 1132 aa25.28■■□□□ 1.64
GMDS-202ENST00000380815 CHD4Q14839 1912 aa25.28■■□□□ 1.64
GMDS-202ENST00000380815 JAK2O60674 1132 aa25.28■■□□□ 1.64
GMDS-202ENST00000380815 DEKP35659 375 aaKnown RBP25.28■■□□□ 1.64
GMDS-202ENST00000380815 GSTO1P78417 241 aa25.28■■□□□ 1.64
GMDS-202ENST00000380815 NSUN7Q8NE18 718 aaKnown RBP25.28■■□□□ 1.64
GMDS-202ENST00000380815 CRNKL1Q9BZJ0 848 aaKnown RBP25.28■■□□□ 1.64
GMDS-202ENST00000380815 AATFQ9NY61 560 aaKnown RBP eCLIP25.28■■□□□ 1.64
GMDS-202ENST00000380815 BRPF3Q9ULD4 1205 aa25.28■■□□□ 1.64
GMDS-202ENST00000380815 SH2B2O14492 632 aaPredicted RBP25.27■■□□□ 1.64
GMDS-202ENST00000380815 HMGN5P82970 282 aaKnown RBP25.27■■□□□ 1.64
GMDS-202ENST00000380815 NKX2-3Q8TAU0 364 aa25.27■■□□□ 1.64
GMDS-202ENST00000380815 NAP1L2Q9ULW6 460 aaPredicted RBP25.27■■□□□ 1.64
GMDS-202ENST00000380815 TACC3Q9Y6A5 838 aa25.27■■□□□ 1.64
GMDS-202ENST00000380815 KLF18A0A0U1RQI7 1052 aa25.26■■□□□ 1.63
GMDS-202ENST00000380815 CCT2P78371 535 aaKnown RBP25.26■■□□□ 1.63
GMDS-202ENST00000380815 MPNDQ8N594 471 aa25.26■■□□□ 1.63
GMDS-202ENST00000380815 CHAMP1Q96JM3 812 aa25.26■■□□□ 1.63
GMDS-202ENST00000380815 TMX4Q9H1E5 349 aaPredicted RBP25.26■■□□□ 1.63
GMDS-202ENST00000380815 PRPF40AO75400 957 aaKnown RBP25.26■■□□□ 1.63
GMDS-202ENST00000380815 CTDNEP1O95476 244 aa25.26■■□□□ 1.63
GMDS-202ENST00000380815 KLHL40Q2TBA0 621 aa25.26■■□□□ 1.63
GMDS-202ENST00000380815 STYK1Q6J9G0 422 aa25.26■■□□□ 1.63
GMDS-202ENST00000380815 C2CD5Q86YS7 1000 aa25.26■■□□□ 1.63
GMDS-202ENST00000380815 MTA3Q9BTC8 594 aa25.26■■□□□ 1.63
GMDS-202ENST00000380815 INCENPQ9NQS7 918 aa25.26■■□□□ 1.63
GMDS-202ENST00000380815 ATP8A2Q9NTI2 1148 aa25.26■■□□□ 1.63
GMDS-202ENST00000380815 ZSWIM5Q9P217 1185 aa25.26■■□□□ 1.63
GMDS-202ENST00000380815 VPS37CA5D8V6 355 aaPredicted RBP25.25■■□□□ 1.63
GMDS-202ENST00000380815 DHX16O60231 1041 aaKnown RBP25.25■■□□□ 1.63
GMDS-202ENST00000380815 KDM4AO75164 1064 aa25.25■■□□□ 1.63
GMDS-202ENST00000380815 IGDCC4Q8TDY8 1250 aa25.25■■□□□ 1.63
GMDS-202ENST00000380815 HPS5Q9UPZ3 1129 aa25.25■■□□□ 1.63
GMDS-202ENST00000380815 MINDY4BA8MYZ0 360 aa25.24■■□□□ 1.63
GMDS-202ENST00000380815 H0YIN7 160 aa25.24■■□□□ 1.63
GMDS-202ENST00000380815 TBC1D22AQ8WUA7 517 aa25.24■■□□□ 1.63
GMDS-202ENST00000380815 COA1Q9GZY4 146 aa25.24■■□□□ 1.63
GMDS-202ENST00000380815 NCOA5Q9HCD5 579 aaKnown RBP25.24■■□□□ 1.63
GMDS-202ENST00000380815 KIF3AQ9Y496 699 aa25.24■■□□□ 1.63
GMDS-202ENST00000380815 PTPDC1A2A3K4 754 aa25.23■■□□□ 1.63
GMDS-202ENST00000380815 GOLGA8BA8MQT2 603 aa25.23■■□□□ 1.63
GMDS-202ENST00000380815 LDHCP07864 332 aa25.23■■□□□ 1.63
GMDS-202ENST00000380815 LIFRP42702 1097 aa25.23■■□□□ 1.63
GMDS-202ENST00000380815 DPP8Q6V1X1 898 aaPredicted RBP25.23■■□□□ 1.63
GMDS-202ENST00000380815 SGMS1Q86VZ5 419 aa25.23■■□□□ 1.63
GMDS-202ENST00000380815 ZNF622Q969S3 477 aaKnown RBP eCLIP25.23■■□□□ 1.63
GMDS-202ENST00000380815 DDX49Q9Y6V7 483 aaKnown RBP25.23■■□□□ 1.63
GMDS-202ENST00000380815 FAM205AQ6ZU69 1335 aa25.23■■□□□ 1.63
GMDS-202ENST00000380815 PCP11498 1178 aaKnown RBP25.23■■□□□ 1.63
GMDS-202ENST00000380815 FAM184AQ8NB25 1140 aa25.23■■□□□ 1.63
GMDS-202ENST00000380815 DCP1AQ9NPI6 582 aaPredicted RBP25.23■■□□□ 1.63
GMDS-202ENST00000380815 PPP4CP60510 307 aa25.22■■□□□ 1.63
GMDS-202ENST00000380815 GRIK5Q16478 980 aa25.22■■□□□ 1.63
GMDS-202ENST00000380815 CTR9Q6PD62 1173 aa25.22■■□□□ 1.63
GMDS-202ENST00000380815 CDC37L1Q7L3B6 337 aa25.22■■□□□ 1.63
GMDS-202ENST00000380815 DDX11Q96FC9 970 aa25.22■■□□□ 1.63
GMDS-202ENST00000380815 ZC3H12CQ9C0D7 883 aaKnown RBP25.22■■□□□ 1.63
GMDS-202ENST00000380815 LY9Q9HBG7 655 aa25.22■■□□□ 1.63
GMDS-202ENST00000380815 BAG3O95817 575 aa25.21■■□□□ 1.63
GMDS-202ENST00000380815 FGRP09769 529 aa25.21■■□□□ 1.63
GMDS-202ENST00000380815 TMEM67Q5HYA8 995 aa25.21■■□□□ 1.63
GMDS-202ENST00000380815 CERS3Q8IU89 383 aa25.21■■□□□ 1.63
GMDS-202ENST00000380815 SART3Q15020 963 aaKnown RBP25.21■■□□□ 1.63
GMDS-202ENST00000380815 MFSD14BQ5SR56 506 aa25.21■■□□□ 1.63
GMDS-202ENST00000380815 OLFM4Q6UX06 510 aa25.21■■□□□ 1.63
GMDS-202ENST00000380815 DEFB132Q7Z7B7 95 aa25.21■■□□□ 1.63
GMDS-202ENST00000380815 TOMM22Q9NS69 142 aa25.21■■□□□ 1.63
GMDS-202ENST00000380815 USP17L12C9JPN9 530 aa25.2■■□□□ 1.62
GMDS-202ENST00000380815 USP17L21D6R901 530 aa25.2■■□□□ 1.62
GMDS-202ENST00000380815 IFIT3O14879 490 aaKnown RBP25.2■■□□□ 1.62
GMDS-202ENST00000380815 DIXDC1Q155Q3 683 aa25.2■■□□□ 1.62
GMDS-202ENST00000380815 FOXD4L6Q3SYB3 417 aaPredicted RBP25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms