RNA–Protein interactions for RNA: ENST00000378204.6

EXT1-201, Transcript of exostosin glycosyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXT1, Length 8,270 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-201ENST00000378204 DZIP3Q86Y13 1208 aaKnown RBP16.72■□□□□ 0.27
EXT1-201ENST00000378204 NFATC2IPQ8NCF5 419 aa16.72■□□□□ 0.27
EXT1-201ENST00000378204 MICAL1Q8TDZ2 1067 aa16.72■□□□□ 0.27
EXT1-201ENST00000378204 CCDC110Q8TBZ0 833 aa16.72■□□□□ 0.27
EXT1-201ENST00000378204 FLT4P35916 1363 aa16.72■□□□□ 0.27
EXT1-201ENST00000378204 TNNC1P63316 161 aa16.72■□□□□ 0.27
EXT1-201ENST00000378204 NDC80O14777 642 aa16.72■□□□□ 0.27
EXT1-201ENST00000378204 POLR3AO14802 1390 aaPredicted RBP16.72■□□□□ 0.27
EXT1-201ENST00000378204 STMN1P16949 149 aa16.72■□□□□ 0.27
EXT1-201ENST00000378204 SIRT1Q96EB6 747 aa16.72■□□□□ 0.27
EXT1-201ENST00000378204 LDHBP07195 334 aaKnown RBP16.72■□□□□ 0.27
EXT1-201ENST00000378204 GJC1P36383 396 aa16.72■□□□□ 0.27
EXT1-201ENST00000378204 STX17P56962 302 aa16.72■□□□□ 0.27
EXT1-201ENST00000378204 DMTNQ08495 405 aa16.72■□□□□ 0.27
EXT1-201ENST00000378204 ANAPC4Q9UJX5 808 aa16.71■□□□□ 0.27
EXT1-201ENST00000378204 UHRF1BP1LA0JNW5 1464 aa16.71■□□□□ 0.27
EXT1-201ENST00000378204 FAM212AQ96EL1 285 aa16.71■□□□□ 0.27
EXT1-201ENST00000378204 SELENOSQ9BQE4 189 aa16.71■□□□□ 0.27
EXT1-201ENST00000378204 SAMD15Q9P1V8 674 aa16.71■□□□□ 0.27
EXT1-201ENST00000378204 PPP1R7Q15435 360 aa16.71■□□□□ 0.27
EXT1-201ENST00000378204 WHAMMQ8TF30 809 aa16.71■□□□□ 0.27
EXT1-201ENST00000378204 TRIM7Q9C029 511 aa16.71■□□□□ 0.27
EXT1-201ENST00000378204 PUS7Q96PZ0 661 aaKnown RBP16.71■□□□□ 0.27
EXT1-201ENST00000378204 MAP3K5Q99683 1374 aa16.71■□□□□ 0.27
EXT1-201ENST00000378204 LRRC23Q53EV4 343 aaPredicted RBP16.71■□□□□ 0.27
EXT1-201ENST00000378204 IFT81Q8WYA0 676 aa16.71■□□□□ 0.26
EXT1-201ENST00000378204 ACSBG1Q96GR2 724 aa16.71■□□□□ 0.26
EXT1-201ENST00000378204 ANKRD2Q9GZV1 360 aa16.71■□□□□ 0.26
EXT1-201ENST00000378204 BIVM-ERCC5R4GMW8 1640 aa16.7■□□□□ 0.26
EXT1-201ENST00000378204 ZEB2O60315 1214 aa16.7■□□□□ 0.26
EXT1-201ENST00000378204 KARSQ15046 597 aaKnown RBP16.7■□□□□ 0.26
EXT1-201ENST00000378204 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.7■□□□□ 0.26
EXT1-201ENST00000378204 ABCC1P33527 1531 aa16.7■□□□□ 0.26
EXT1-201ENST00000378204 AKR1B15C9JRZ8 316 aaPredicted RBP16.7■□□□□ 0.26
EXT1-201ENST00000378204 LUC7L3O95232 432 aaKnown RBP16.7■□□□□ 0.26
EXT1-201ENST00000378204 PLEKHM2Q8IWE5 1019 aa16.7■□□□□ 0.26
EXT1-201ENST00000378204 TRIM4Q9C037 500 aa16.7■□□□□ 0.26
EXT1-201ENST00000378204 MYL5Q02045 173 aa16.7■□□□□ 0.26
EXT1-201ENST00000378204 DDB1Q16531 1140 aa16.7■□□□□ 0.26
EXT1-201ENST00000378204 PPP1R9BQ96SB3 815 aa16.7■□□□□ 0.26
EXT1-201ENST00000378204 MAK16Q9BXY0 300 aaKnown RBP16.7■□□□□ 0.26
EXT1-201ENST00000378204 ZFYVE9O95405 1425 aa16.7■□□□□ 0.26
EXT1-201ENST00000378204 DPH6Q7L8W6 267 aa16.7■□□□□ 0.26
EXT1-201ENST00000378204 CCDC26Q8TAB7 109 aa16.7■□□□□ 0.26
EXT1-201ENST00000378204 VTI1AQ96AJ9 217 aa16.7■□□□□ 0.26
EXT1-201ENST00000378204 BAG1Q99933 345 aaPredicted RBP16.7■□□□□ 0.26
EXT1-201ENST00000378204 IRS4O14654 1257 aaPredicted RBP16.7■□□□□ 0.26
EXT1-201ENST00000378204 CHMLP26374 656 aa16.7■□□□□ 0.26
EXT1-201ENST00000378204 PSMC4P43686 418 aa16.7■□□□□ 0.26
EXT1-201ENST00000378204 CALCOCO2Q13137 446 aa16.7■□□□□ 0.26
EXT1-201ENST00000378204 C8orf34Q49A92 452 aa16.7■□□□□ 0.26
EXT1-201ENST00000378204 CCDC25Q86WR0 208 aa16.7■□□□□ 0.26
EXT1-201ENST00000378204 MIGA1Q8NAN2 632 aa16.7■□□□□ 0.26
EXT1-201ENST00000378204 GBP5Q96PP8 586 aa16.7■□□□□ 0.26
EXT1-201ENST00000378204 NAP1L4Q99733 375 aaKnown RBP16.69■□□□□ 0.26
EXT1-201ENST00000378204 VEZTQ9HBM0 779 aa16.69■□□□□ 0.26
EXT1-201ENST00000378204 RTCBQ9Y3I0 505 aaKnown RBP16.69■□□□□ 0.26
EXT1-201ENST00000378204 VAMP4O75379 141 aa16.69■□□□□ 0.26
EXT1-201ENST00000378204 SETDB1Q15047 1291 aa16.69■□□□□ 0.26
EXT1-201ENST00000378204 GPATCH8Q9UKJ3 1502 aaKnown RBP16.69■□□□□ 0.26
EXT1-201ENST00000378204 WDR7Q9Y4E6 1490 aa16.69■□□□□ 0.26
EXT1-201ENST00000378204 CEP104O60308 925 aa16.69■□□□□ 0.26
EXT1-201ENST00000378204 ZC4H2Q9NQZ6 224 aa16.69■□□□□ 0.26
EXT1-201ENST00000378204 IL2RBP14784 551 aa16.69■□□□□ 0.26
EXT1-201ENST00000378204 SV2BQ7L1I2 683 aa16.69■□□□□ 0.26
EXT1-201ENST00000378204 HELLSQ9NRZ9 838 aa16.69■□□□□ 0.26
EXT1-201ENST00000378204 NSFL1CQ9UNZ2 370 aaKnown RBP16.69■□□□□ 0.26
EXT1-201ENST00000378204 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.69■□□□□ 0.26
EXT1-201ENST00000378204 DCAF17Q5H9S7 520 aaPredicted RBP16.69■□□□□ 0.26
EXT1-201ENST00000378204 TTC16Q8NEE8 873 aa16.69■□□□□ 0.26
EXT1-201ENST00000378204 CSRNP2Q9H175 543 aa16.69■□□□□ 0.26
EXT1-201ENST00000378204 ZBTB40Q9NUA8 1239 aa16.69■□□□□ 0.26
EXT1-201ENST00000378204 ODF2LQ9ULJ1 636 aa16.69■□□□□ 0.26
EXT1-201ENST00000378204 ALDH3A1P30838 453 aa16.69■□□□□ 0.26
EXT1-201ENST00000378204 CA8P35219 290 aa16.69■□□□□ 0.26
EXT1-201ENST00000378204 BICC1Q9H694 974 aaKnown RBP16.69■□□□□ 0.26
EXT1-201ENST00000378204 PARD3Q8TEW0 1356 aa16.68■□□□□ 0.26
EXT1-201ENST00000378204 VWA3AA6NCI4 1184 aa16.68■□□□□ 0.26
EXT1-201ENST00000378204 EPB41P11171 864 aaKnown RBP16.68■□□□□ 0.26
EXT1-201ENST00000378204 CCDC122Q5T0U0 273 aa16.68■□□□□ 0.26
EXT1-201ENST00000378204 URB2Q14146 1524 aaKnown RBP16.68■□□□□ 0.26
EXT1-201ENST00000378204 PARP1P09874 1014 aaKnown RBP16.68■□□□□ 0.26
EXT1-201ENST00000378204 TFCP2Q12800 502 aa16.68■□□□□ 0.26
EXT1-201ENST00000378204 APBB1IPQ7Z5R6 666 aaPredicted RBP16.68■□□□□ 0.26
EXT1-201ENST00000378204 KIFAP3Q92845 792 aa16.68■□□□□ 0.26
EXT1-201ENST00000378204 GAS8O95995 478 aa16.68■□□□□ 0.26
EXT1-201ENST00000378204 PLCD1P51178 756 aa16.68■□□□□ 0.26
EXT1-201ENST00000378204 POLKQ9UBT6 870 aa16.68■□□□□ 0.26
EXT1-201ENST00000378204 RILPL1Q5EBL4 403 aa16.68■□□□□ 0.26
EXT1-201ENST00000378204 AFAP1L1Q8TED9 768 aa16.68■□□□□ 0.26
EXT1-201ENST00000378204 SLC8A1P32418 973 aa16.68■□□□□ 0.26
EXT1-201ENST00000378204 VWA3BQ502W6 1294 aa16.68■□□□□ 0.26
EXT1-201ENST00000378204 PRAG1Q86YV5 1406 aa16.68■□□□□ 0.26
EXT1-201ENST00000378204 RHOXF2BP0C7M4 288 aa16.68■□□□□ 0.26
EXT1-201ENST00000378204 RHOXF2Q9BQY4 288 aa16.68■□□□□ 0.26
EXT1-201ENST00000378204 TRIM14Q14142 442 aa16.67■□□□□ 0.26
EXT1-201ENST00000378204 PPP2R5AQ15172 486 aa16.67■□□□□ 0.26
EXT1-201ENST00000378204 CWF19L2Q2TBE0 894 aaKnown RBP16.67■□□□□ 0.26
EXT1-201ENST00000378204 SYT10Q6XYQ8 523 aa16.67■□□□□ 0.26
EXT1-201ENST00000378204 PHLDB2Q86SQ0 1253 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms