RNA–Protein interactions for RNA: ENST00000377823.1

CUBN-201, Transcript of cubilin, humanhuman

TSL 3 BASIC

Gene CUBN, Length 705 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-201ENST00000377823 SPDYE3A6NKU9 549 aa6.33□□□□□ -1.4
CUBN-201ENST00000377823 ADAM11O75078 769 aa6.33□□□□□ -1.4
CUBN-201ENST00000377823 TRIM37O94972 964 aa6.33□□□□□ -1.4
CUBN-201ENST00000377823 F13A1P00488 732 aa6.33□□□□□ -1.4
CUBN-201ENST00000377823 LORP23490 312 aaPredicted RBP6.33□□□□□ -1.4
CUBN-201ENST00000377823 TRIM28Q13263 835 aaKnown RBP6.33□□□□□ -1.4
CUBN-201ENST00000377823 PDE3AQ14432 1141 aa6.33□□□□□ -1.4
CUBN-201ENST00000377823 FOXD4L6Q3SYB3 417 aaPredicted RBP6.33□□□□□ -1.4
CUBN-201ENST00000377823 DIEXFQ68CQ4 756 aaKnown RBP6.33□□□□□ -1.4
CUBN-201ENST00000377823 SCARA3Q6AZY7 606 aa6.33□□□□□ -1.4
CUBN-201ENST00000377823 FOXD4L3Q6VB84 417 aaPredicted RBP6.33□□□□□ -1.4
CUBN-201ENST00000377823 BNC2Q6ZN30 1099 aaPredicted RBP6.33□□□□□ -1.4
CUBN-201ENST00000377823 VPS37DQ86XT2 251 aa6.33□□□□□ -1.4
CUBN-201ENST00000377823 FMR1NBQ8N0W7 255 aaPredicted RBP6.33□□□□□ -1.4
CUBN-201ENST00000377823 ZSCAN1Q8NBB4 408 aa6.33□□□□□ -1.4
CUBN-201ENST00000377823 SREK1Q8WXA9 508 aaKnown RBP6.33□□□□□ -1.4
CUBN-201ENST00000377823 EAF1Q96JC9 268 aaPredicted RBP6.33□□□□□ -1.4
CUBN-201ENST00000377823 NT5C1AQ9BXI3 368 aa6.33□□□□□ -1.4
CUBN-201ENST00000377823 KCNK4Q9NYG8 393 aa6.33□□□□□ -1.4
CUBN-201ENST00000377823 LOC100289279A0A1B0GTE1 492 aa6.32□□□□□ -1.4
CUBN-201ENST00000377823 FAM229AH3BQW9 127 aa6.32□□□□□ -1.4
CUBN-201ENST00000377823 DLL1O00548 723 aa6.32□□□□□ -1.4
CUBN-201ENST00000377823 CTSBP07858 339 aa6.32□□□□□ -1.4
CUBN-201ENST00000377823 PTPN11Q06124 597 aaPredicted RBP6.32□□□□□ -1.4
CUBN-201ENST00000377823 FAM196AQ6ZSG2 479 aa6.32□□□□□ -1.4
CUBN-201ENST00000377823 PODNQ7Z5L7 613 aa6.32□□□□□ -1.4
CUBN-201ENST00000377823 GAL3ST3Q96A11 431 aa6.32□□□□□ -1.4
CUBN-201ENST00000377823 ACSBG1Q96GR2 724 aa6.32□□□□□ -1.4
CUBN-201ENST00000377823 CCDC86Q9H6F5 360 aaKnown RBP6.32□□□□□ -1.4
CUBN-201ENST00000377823 KRT82Q9NSB4 513 aa6.32□□□□□ -1.4
CUBN-201ENST00000377823 UBP1Q9NZI7 540 aa6.32□□□□□ -1.4
CUBN-201ENST00000377823 USP35Q9P2H5 1018 aa6.32□□□□□ -1.4
CUBN-201ENST00000377823 ROBO2Q9HCK4 1378 aa6.31□□□□□ -1.4
CUBN-201ENST00000377823 DNAJA1P31689 397 aaKnown RBP6.31□□□□□ -1.4
CUBN-201ENST00000377823 ARID5AQ03989 594 aa6.31□□□□□ -1.4
CUBN-201ENST00000377823 APOBRQ0VD83 1088 aa6.31□□□□□ -1.4
CUBN-201ENST00000377823 SF3A1Q15459 793 aaKnown RBP6.31□□□□□ -1.4
CUBN-201ENST00000377823 DUOXA2Q1HG44 320 aa6.31□□□□□ -1.4
CUBN-201ENST00000377823 HP1BP3Q5SSJ5 553 aaPredicted RBP6.31□□□□□ -1.4
CUBN-201ENST00000377823 BEND7Q8N7W2 519 aaPredicted RBP6.31□□□□□ -1.4
CUBN-201ENST00000377823 RASGRP4Q8TDF6 673 aa6.31□□□□□ -1.4
CUBN-201ENST00000377823 GPBAR1Q8TDU6 330 aa6.31□□□□□ -1.4
CUBN-201ENST00000377823 GATAD2BQ8WXI9 593 aa6.31□□□□□ -1.4
CUBN-201ENST00000377823 SPATA32Q96LK8 384 aa6.31□□□□□ -1.4
CUBN-201ENST00000377823 TANGO6Q9C0B7 1094 aa6.31□□□□□ -1.4
CUBN-201ENST00000377823 CACNA2D2Q9NY47 1150 aa6.31□□□□□ -1.4
CUBN-201ENST00000377823 PRKAG2Q9UGJ0 569 aa6.31□□□□□ -1.4
CUBN-201ENST00000377823 ADAMTS8Q9UP79 889 aa6.31□□□□□ -1.4
CUBN-201ENST00000377823 CNTNAP5Q8WYK1 1306 aa6.3□□□□□ -1.4
CUBN-201ENST00000377823 FAM221AA4D161 298 aa6.3□□□□□ -1.4
CUBN-201ENST00000377823 TLR3O15455 904 aaKnown RBP6.3□□□□□ -1.4
CUBN-201ENST00000377823 IGSF3O75054 1194 aa6.3□□□□□ -1.4
CUBN-201ENST00000377823 BPNT1O95861 308 aa6.3□□□□□ -1.4
CUBN-201ENST00000377823 DLGAP3O95886 979 aa6.3□□□□□ -1.4
CUBN-201ENST00000377823 ATF4P18848 351 aaPredicted RBP6.3□□□□□ -1.4
CUBN-201ENST00000377823 LIG1P18858 919 aa6.3□□□□□ -1.4
CUBN-201ENST00000377823 CRKP46108 304 aa6.3□□□□□ -1.4
CUBN-201ENST00000377823 HNRNPUQ00839 825 aaKnown RBP eCLIP6.3□□□□□ -1.4
CUBN-201ENST00000377823 PRRT3Q5FWE3 981 aa6.3□□□□□ -1.4
CUBN-201ENST00000377823 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.3□□□□□ -1.4
CUBN-201ENST00000377823 FBXO27Q8NI29 283 aa6.3□□□□□ -1.4
CUBN-201ENST00000377823 UBASH3BQ8TF42 649 aa6.3□□□□□ -1.4
CUBN-201ENST00000377823 NKD1Q969G9 470 aa6.3□□□□□ -1.4
CUBN-201ENST00000377823 DRC1Q96MC2 740 aa6.3□□□□□ -1.4
CUBN-201ENST00000377823 GMLQ99445 158 aa6.3□□□□□ -1.4
CUBN-201ENST00000377823 NOP53Q9NZM5 478 aaKnown RBP6.3□□□□□ -1.4
CUBN-201ENST00000377823 PPP1R1BQ9UD71 204 aaPredicted RBP6.3□□□□□ -1.4
CUBN-201ENST00000377823 PCDHA4Q9UN74 947 aa6.3□□□□□ -1.4
CUBN-201ENST00000377823 ZNF862O60290 1169 aa6.29□□□□□ -1.4
CUBN-201ENST00000377823 CILPO75339 1184 aa6.29□□□□□ -1.4
CUBN-201ENST00000377823 WISP1O95388 367 aa6.29□□□□□ -1.4
CUBN-201ENST00000377823 ELNP15502 786 aa6.29□□□□□ -1.4
CUBN-201ENST00000377823 RPL6Q02878 288 aaKnown RBP6.29□□□□□ -1.4
CUBN-201ENST00000377823 MPP2Q14168 576 aa6.29□□□□□ -1.4
CUBN-201ENST00000377823 SEZ6Q53EL9 994 aa6.29□□□□□ -1.4
CUBN-201ENST00000377823 IGF2-ASQ6U949 168 aa6.29□□□□□ -1.4
CUBN-201ENST00000377823 WDR89Q96FK6 387 aaPredicted RBP6.29□□□□□ -1.4
CUBN-201ENST00000377823 LRRC3Q9BY71 257 aa6.29□□□□□ -1.4
CUBN-201ENST00000377823 EFR3BQ9Y2G0 817 aa6.29□□□□□ -1.4
CUBN-201ENST00000377823 CWF19L2Q2TBE0 894 aaKnown RBP6.28□□□□□ -1.4
CUBN-201ENST00000377823 EXOSC6Q5RKV6 272 aaKnown RBP6.28□□□□□ -1.4
CUBN-201ENST00000377823 ACAD11Q709F0 780 aa6.28□□□□□ -1.4
CUBN-201ENST00000377823 SLITRK4Q8IW52 837 aa6.28□□□□□ -1.4
CUBN-201ENST00000377823 SEC16BQ96JE7 1060 aa6.28□□□□□ -1.4
CUBN-201ENST00000377823 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.28□□□□□ -1.4
CUBN-201ENST00000377823 RUSC1Q9BVN2 902 aa6.28□□□□□ -1.4
CUBN-201ENST00000377823 MRPL18Q9H0U6 180 aaKnown RBP6.28□□□□□ -1.4
CUBN-201ENST00000377823 RAD18Q9NS91 495 aa6.28□□□□□ -1.4
CUBN-201ENST00000377823 GINM1Q9NU53 330 aa6.28□□□□□ -1.4
CUBN-201ENST00000377823 AOC2O75106 756 aa6.27□□□□□ -1.41
CUBN-201ENST00000377823 SLFN14P0C7P3 912 aa6.27□□□□□ -1.41
CUBN-201ENST00000377823 ATP2B1P20020 1258 aa6.27□□□□□ -1.41
CUBN-201ENST00000377823 MCM4P33991 863 aa6.27□□□□□ -1.41
CUBN-201ENST00000377823 NASPP49321 788 aaPredicted RBP6.27□□□□□ -1.41
CUBN-201ENST00000377823 CDK8P49336 464 aa6.27□□□□□ -1.41
CUBN-201ENST00000377823 COL9A2Q14055 689 aaPredicted RBP6.27□□□□□ -1.41
CUBN-201ENST00000377823 GRIK4Q16099 956 aa6.27□□□□□ -1.41
CUBN-201ENST00000377823 KIF4BQ2VIQ3 1234 aa6.27□□□□□ -1.41
CUBN-201ENST00000377823 WIPI1Q5MNZ9 446 aaPredicted RBP6.27□□□□□ -1.41
CUBN-201ENST00000377823 KIAA1211Q6ZU35 1233 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms