RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 COG6Q9Y2V7 657 aa20.7■□□□□ 0.9
HMGN4-201ENST00000377575 SPATA5Q8NB90 893 aa20.69■□□□□ 0.9
HMGN4-201ENST00000377575 HOOK2Q96ED9 719 aa20.69■□□□□ 0.9
HMGN4-201ENST00000377575 CSRNP1Q96S65 589 aa20.69■□□□□ 0.9
HMGN4-201ENST00000377575 SREBF2Q12772 1141 aa20.68■□□□□ 0.9
HMGN4-201ENST00000377575 ERC1Q8IUD2 1116 aa20.68■□□□□ 0.9
HMGN4-201ENST00000377575 ANKRD13AQ8IZ07 590 aa20.68■□□□□ 0.9
HMGN4-201ENST00000377575 SLC10A4Q96EP9 437 aa20.68■□□□□ 0.9
HMGN4-201ENST00000377575 HMG20BQ9P0W2 317 aa20.68■□□□□ 0.9
HMGN4-201ENST00000377575 DOCK2Q92608 1830 aa20.68■□□□□ 0.9
HMGN4-201ENST00000377575 CASP8AP2Q9UKL3 1982 aa20.68■□□□□ 0.9
HMGN4-201ENST00000377575 HMMRO75330 724 aa20.67■□□□□ 0.9
HMGN4-201ENST00000377575 PDE3AQ14432 1141 aa20.67■□□□□ 0.9
HMGN4-201ENST00000377575 HSP90AB4PQ58FF6 505 aa20.67■□□□□ 0.9
HMGN4-201ENST00000377575 CCDC158Q5M9N0 1113 aa20.67■□□□□ 0.9
HMGN4-201ENST00000377575 TTC39AQ5SRH9 613 aa20.67■□□□□ 0.9
HMGN4-201ENST00000377575 ERICH6Q7L0X2 663 aa20.67■□□□□ 0.9
HMGN4-201ENST00000377575 RNF186Q9NXI6 227 aa20.67■□□□□ 0.9
HMGN4-201ENST00000377575 GAKO14976 1311 aa20.67■□□□□ 0.9
HMGN4-201ENST00000377575 USP2O75604 605 aaPredicted RBP20.66■□□□□ 0.9
HMGN4-201ENST00000377575 ZBTB48P10074 688 aaPredicted RBP20.66■□□□□ 0.9
HMGN4-201ENST00000377575 MKRN3Q13064 507 aaKnown RBP20.66■□□□□ 0.9
HMGN4-201ENST00000377575 SPRYD7Q5W111 196 aa20.66■□□□□ 0.9
HMGN4-201ENST00000377575 CDC42EP5Q6NZY7 148 aa20.66■□□□□ 0.9
HMGN4-201ENST00000377575 CDAN1Q8IWY9 1227 aa20.66■□□□□ 0.9
HMGN4-201ENST00000377575 RPAP2Q8IXW5 612 aaPredicted RBP20.66■□□□□ 0.9
HMGN4-201ENST00000377575 ZBTB40Q9NUA8 1239 aa20.66■□□□□ 0.9
HMGN4-201ENST00000377575 TRPA1O75762 1119 aa20.65■□□□□ 0.9
HMGN4-201ENST00000377575 MCAMP43121 646 aa20.65■□□□□ 0.9
HMGN4-201ENST00000377575 WNK4Q96J92 1243 aa20.65■□□□□ 0.9
HMGN4-201ENST00000377575 CLMNQ96JQ2 1002 aa20.65■□□□□ 0.9
HMGN4-201ENST00000377575 DBNDD2Q9BQY9 259 aa20.65■□□□□ 0.9
HMGN4-201ENST00000377575 USP40Q9NVE5 1235 aa20.65■□□□□ 0.9
HMGN4-201ENST00000377575 EXOC6BQ9Y2D4 811 aa20.65■□□□□ 0.9
HMGN4-201ENST00000377575 MROH7-TTC4A0A0A0MT08 1334 aa20.64■□□□□ 0.89
HMGN4-201ENST00000377575 GSTO1P78417 241 aa20.64■□□□□ 0.89
HMGN4-201ENST00000377575 DCAF15Q66K64 600 aa20.64■□□□□ 0.89
HMGN4-201ENST00000377575 PI16Q6UXB8 463 aa20.64■□□□□ 0.89
HMGN4-201ENST00000377575 FAM151AQ8WW52 585 aa20.64■□□□□ 0.89
HMGN4-201ENST00000377575 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.64■□□□□ 0.89
HMGN4-201ENST00000377575 MANSC4A6NHS7 340 aaPredicted RBP20.63■□□□□ 0.89
HMGN4-201ENST00000377575 TM4SF4P48230 202 aa20.63■□□□□ 0.89
HMGN4-201ENST00000377575 MECOMQ03112 1051 aa20.63■□□□□ 0.89
HMGN4-201ENST00000377575 FAM163AQ96GL9 167 aaPredicted RBP20.63■□□□□ 0.89
HMGN4-201ENST00000377575 CSADQ9Y600 493 aa20.63■□□□□ 0.89
HMGN4-201ENST00000377575 MYO5AQ9Y4I1 1855 aaKnown RBP20.62■□□□□ 0.89
HMGN4-201ENST00000377575 TCP10Q12799 353 aa20.62■□□□□ 0.89
HMGN4-201ENST00000377575 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.62■□□□□ 0.89
HMGN4-201ENST00000377575 ZNF512BQ96KM6 892 aaPredicted RBP20.62■□□□□ 0.89
HMGN4-201ENST00000377575 RAI14Q9P0K7 980 aa20.62■□□□□ 0.89
HMGN4-201ENST00000377575 LRP2BPQ9P2M1 347 aa20.62■□□□□ 0.89
HMGN4-201ENST00000377575 DBNLQ9UJU6 430 aaKnown RBP20.62■□□□□ 0.89
HMGN4-201ENST00000377575 RFX7Q2KHR2 1363 aa20.61■□□□□ 0.89
HMGN4-201ENST00000377575 LDHCP07864 332 aa20.61■□□□□ 0.89
HMGN4-201ENST00000377575 BTDP43251 543 aa20.61■□□□□ 0.89
HMGN4-201ENST00000377575 MAP3K9P80192 1104 aa20.61■□□□□ 0.89
HMGN4-201ENST00000377575 NFIAQ12857 509 aa20.61■□□□□ 0.89
HMGN4-201ENST00000377575 C20orf194Q5TEA3 1177 aa20.61■□□□□ 0.89
HMGN4-201ENST00000377575 TBC1D9Q6ZT07 1266 aa20.61■□□□□ 0.89
HMGN4-201ENST00000377575 ELP3Q9H9T3 547 aa20.61■□□□□ 0.89
HMGN4-201ENST00000377575 INHBEP58166 350 aa20.6■□□□□ 0.89
HMGN4-201ENST00000377575 VGLL4Q14135 290 aa20.6■□□□□ 0.89
HMGN4-201ENST00000377575 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.6■□□□□ 0.89
HMGN4-201ENST00000377575 NSUN4Q96CB9 384 aaKnown RBP20.6■□□□□ 0.89
HMGN4-201ENST00000377575 EAF2Q96CJ1 260 aaPredicted RBP20.6■□□□□ 0.89
HMGN4-201ENST00000377575 WRNIP1Q96S55 665 aa20.6■□□□□ 0.89
HMGN4-201ENST00000377575 IDI2Q9BXS1 227 aa20.6■□□□□ 0.89
HMGN4-201ENST00000377575 ZNF341Q9BYN7 854 aa20.6■□□□□ 0.89
HMGN4-201ENST00000377575 CCDC8Q9H0W5 538 aaPredicted RBP20.6■□□□□ 0.89
HMGN4-201ENST00000377575 TLR7Q9NYK1 1049 aaKnown RBP20.6■□□□□ 0.89
HMGN4-201ENST00000377575 FAM198AQ9UFP1 575 aa20.6■□□□□ 0.89
HMGN4-201ENST00000377575 GPR75-ASB3A0A0A6YYF3 556 aa20.59■□□□□ 0.89
HMGN4-201ENST00000377575 IGSF3O75054 1194 aa20.59■□□□□ 0.89
HMGN4-201ENST00000377575 ENTPD3O75355 529 aa20.59■□□□□ 0.89
HMGN4-201ENST00000377575 ALDH1A1P00352 501 aa20.59■□□□□ 0.89
HMGN4-201ENST00000377575 AACSQ86V21 672 aa20.59■□□□□ 0.89
HMGN4-201ENST00000377575 RHPN1Q8TCX5 695 aa20.59■□□□□ 0.89
HMGN4-201ENST00000377575 OPTNQ96CV9 577 aa20.59■□□□□ 0.89
HMGN4-201ENST00000377575 KIF1BPQ96EK5 621 aa20.59■□□□□ 0.89
HMGN4-201ENST00000377575 SNRKQ9NRH2 765 aa20.59■□□□□ 0.89
HMGN4-201ENST00000377575 FOCADQ5VW36 1801 aa20.58■□□□□ 0.89
HMGN4-201ENST00000377575 MAP4K4O95819 1239 aaPredicted RBP20.58■□□□□ 0.89
HMGN4-201ENST00000377575 RGS3P49796 1198 aa20.58■□□□□ 0.89
HMGN4-201ENST00000377575 NOL10Q9BSC4 688 aaKnown RBP20.58■□□□□ 0.89
HMGN4-201ENST00000377575 CDK5RAP2Q96SN8 1893 aa20.58■□□□□ 0.88
HMGN4-201ENST00000377575 GJA5P36382 358 aa20.57■□□□□ 0.88
HMGN4-201ENST00000377575 SIRT2Q8IXJ6 389 aa20.57■□□□□ 0.88
HMGN4-201ENST00000377575 CLASRPQ8N2M8 674 aaKnown RBP20.57■□□□□ 0.88
HMGN4-201ENST00000377575 ZNF384Q8TF68 577 aa20.57■□□□□ 0.88
HMGN4-201ENST00000377575 RAB11FIP3O75154 756 aa20.56■□□□□ 0.88
HMGN4-201ENST00000377575 WDHD1O75717 1129 aaPredicted RBP20.56■□□□□ 0.88
HMGN4-201ENST00000377575 CYP2E1P05181 493 aaPredicted RBP20.56■□□□□ 0.88
HMGN4-201ENST00000377575 OTUD7BQ6GQQ9 843 aa20.56■□□□□ 0.88
HMGN4-201ENST00000377575 NAA16Q6N069 864 aaPredicted RBP20.56■□□□□ 0.88
HMGN4-201ENST00000377575 MIGA2Q7L4E1 593 aa20.56■□□□□ 0.88
HMGN4-201ENST00000377575 IFNL1Q8IU54 200 aa20.56■□□□□ 0.88
HMGN4-201ENST00000377575 YTHDC1Q96MU7 727 aaKnown RBP20.56■□□□□ 0.88
HMGN4-201ENST00000377575 CFHR5Q9BXR6 569 aa20.56■□□□□ 0.88
HMGN4-201ENST00000377575 IL1RAPL2Q9NP60 686 aa20.56■□□□□ 0.88
HMGN4-201ENST00000377575 APBB1O00213 710 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms