RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 MFSD6Q6ZSS7 791 aa14.95□□□□□ -0.02
USP11-204ENST00000377107 AKAP17AQ02040 695 aaKnown RBP14.95□□□□□ -0.02
USP11-204ENST00000377107 SSRP1Q08945 709 aaKnown RBP14.95□□□□□ -0.02
USP11-204ENST00000377107 KLHL10Q6JEL2 608 aa14.95□□□□□ -0.02
USP11-204ENST00000377107 APOA5Q6Q788 366 aa14.95□□□□□ -0.02
USP11-204ENST00000377107 ENGASEQ8NFI3 743 aa14.95□□□□□ -0.02
USP11-204ENST00000377107 CCDC94Q9BW85 323 aaPredicted RBP14.95□□□□□ -0.02
USP11-204ENST00000377107 RIPOR2Q9Y4F9 1068 aa14.95□□□□□ -0.02
USP11-204ENST00000377107 NEDD4P46934 1319 aa14.95□□□□□ -0.02
USP11-204ENST00000377107 BTBD18B2RXH4 712 aa14.94□□□□□ -0.02
USP11-204ENST00000377107 OLFM4Q6UX06 510 aa14.94□□□□□ -0.02
USP11-204ENST00000377107 SDR42E1Q8WUS8 393 aa14.94□□□□□ -0.02
USP11-204ENST00000377107 PKNOX2Q96KN3 472 aa14.94□□□□□ -0.02
USP11-204ENST00000377107 CDKL5O76039 1030 aa14.94□□□□□ -0.02
USP11-204ENST00000377107 SLC5A1P13866 664 aa14.94□□□□□ -0.02
USP11-204ENST00000377107 CAVIN2O95810 425 aa14.93□□□□□ -0.02
USP11-204ENST00000377107 TTF1Q15361 905 aaPredicted RBP14.93□□□□□ -0.02
USP11-204ENST00000377107 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.93□□□□□ -0.02
USP11-204ENST00000377107 TEX13AQ9BXU3 409 aaPredicted RBP14.93□□□□□ -0.02
USP11-204ENST00000377107 ZSWIM5Q9P217 1185 aa14.93□□□□□ -0.02
USP11-204ENST00000377107 RBM43Q6ZSC3 357 aaKnown RBP14.93□□□□□ -0.02
USP11-204ENST00000377107 SPATA5Q8NB90 893 aa14.93□□□□□ -0.02
USP11-204ENST00000377107 UBAC1Q9BSL1 405 aa14.93□□□□□ -0.02
USP11-204ENST00000377107 RANBP6O60518 1105 aaKnown RBP14.93□□□□□ -0.02
USP11-204ENST00000377107 BRAPQ7Z569 592 aa14.93□□□□□ -0.02
USP11-204ENST00000377107 TRIM22Q8IYM9 498 aa14.93□□□□□ -0.02
USP11-204ENST00000377107 GRAMD1CQ8IYS0 662 aa14.93□□□□□ -0.02
USP11-204ENST00000377107 JMYQ8N9B5 988 aa14.93□□□□□ -0.02
USP11-204ENST00000377107 C5P01031 1676 aa14.93□□□□□ -0.02
USP11-204ENST00000377107 JCADQ9P266 1359 aa14.93□□□□□ -0.02
USP11-204ENST00000377107 FOXN1O15353 648 aa14.92□□□□□ -0.02
USP11-204ENST00000377107 ATP6V1AP38606 617 aa14.92□□□□□ -0.02
USP11-204ENST00000377107 UBASH3AP57075 661 aa14.92□□□□□ -0.02
USP11-204ENST00000377107 SYT10Q6XYQ8 523 aa14.92□□□□□ -0.02
USP11-204ENST00000377107 IFNL3Q8IZI9 196 aa14.92□□□□□ -0.02
USP11-204ENST00000377107 CCAR2Q8N163 923 aaKnown RBP14.92□□□□□ -0.02
USP11-204ENST00000377107 NIP7Q9Y221 180 aaKnown RBP eCLIP14.92□□□□□ -0.02
USP11-204ENST00000377107 PDE8AO60658 829 aa14.92□□□□□ -0.02
USP11-204ENST00000377107 GUCY1A2P33402 732 aa14.92□□□□□ -0.02
USP11-204ENST00000377107 RASGRF1Q13972 1273 aa14.92□□□□□ -0.02
USP11-204ENST00000377107 SART3Q15020 963 aaKnown RBP14.92□□□□□ -0.02
USP11-204ENST00000377107 TRMT44Q8IYL2 757 aaKnown RBP14.92□□□□□ -0.02
USP11-204ENST00000377107 NACAP1Q9BZK3 213 aa14.92□□□□□ -0.02
USP11-204ENST00000377107 CYP7A1P22680 504 aa14.92□□□□□ -0.02
USP11-204ENST00000377107 ZNF215Q9UL58 517 aaPredicted RBP14.92□□□□□ -0.02
USP11-204ENST00000377107 WTIPA6NIX2 430 aaPredicted RBP14.91□□□□□ -0.02
USP11-204ENST00000377107 SMTNL1A8MU46 457 aa14.91□□□□□ -0.02
USP11-204ENST00000377107 SMIM22K7EJ46 135 aa14.91□□□□□ -0.02
USP11-204ENST00000377107 IGHMBP2P38935 993 aaKnown RBP14.91□□□□□ -0.02
USP11-204ENST00000377107 NR5A1Q13285 461 aa14.91□□□□□ -0.02
USP11-204ENST00000377107 WTAPQ15007 396 aa14.91□□□□□ -0.02
USP11-204ENST00000377107 PUM3Q15397 648 aaKnown RBP14.91□□□□□ -0.02
USP11-204ENST00000377107 MRFAP1L1Q96HT8 127 aa14.91□□□□□ -0.02
USP11-204ENST00000377107 AGXT2Q9BYV1 514 aa14.91□□□□□ -0.02
USP11-204ENST00000377107 CYP2D7A0A087X1C5 515 aa14.91□□□□□ -0.02
USP11-204ENST00000377107 YEATS4O95619 227 aa14.91□□□□□ -0.02
USP11-204ENST00000377107 AFMP43652 599 aa14.91□□□□□ -0.02
USP11-204ENST00000377107 FANCCQ00597 558 aa14.91□□□□□ -0.02
USP11-204ENST00000377107 CPLX3Q8WVH0 158 aa14.91□□□□□ -0.02
USP11-204ENST00000377107 RFX7Q2KHR2 1363 aa14.91□□□□□ -0.02
USP11-204ENST00000377107 MROH7-TTC4A0A0A0MT08 1334 aa14.91□□□□□ -0.02
USP11-204ENST00000377107 ATL3Q6DD88 541 aa14.91□□□□□ -0.02
USP11-204ENST00000377107 DIS3L2Q8IYB7 885 aaKnown RBP14.91□□□□□ -0.02
USP11-204ENST00000377107 LCORLQ8N3X6 602 aa14.91□□□□□ -0.02
USP11-204ENST00000377107 KIF18AQ8NI77 898 aa14.91□□□□□ -0.02
USP11-204ENST00000377107 STAMQ92783 540 aa14.91□□□□□ -0.02
USP11-204ENST00000377107 SH2B2O14492 632 aaPredicted RBP14.9□□□□□ -0.02
USP11-204ENST00000377107 COBLO75128 1261 aa14.9□□□□□ -0.02
USP11-204ENST00000377107 RTN1Q16799 776 aa14.9□□□□□ -0.02
USP11-204ENST00000377107 SLC4A9Q96Q91 983 aa14.9□□□□□ -0.02
USP11-204ENST00000377107 POLR3EQ9NVU0 708 aa14.9□□□□□ -0.02
USP11-204ENST00000377107 SALL1Q9NSC2 1324 aa14.9□□□□□ -0.02
USP11-204ENST00000377107 GYG1P46976 350 aa14.9□□□□□ -0.02
USP11-204ENST00000377107 STX17P56962 302 aa14.9□□□□□ -0.02
USP11-204ENST00000377107 SUSD4Q5VX71 490 aa14.9□□□□□ -0.02
USP11-204ENST00000377107 LPIN2Q92539 896 aa14.9□□□□□ -0.02
USP11-204ENST00000377107 STRBPQ96SI9 672 aaKnown RBP14.9□□□□□ -0.02
USP11-204ENST00000377107 NBPF3Q9H094 633 aa14.9□□□□□ -0.02
USP11-204ENST00000377107 CABP5Q9NP86 173 aa14.9□□□□□ -0.02
USP11-204ENST00000377107 ZMYM6O95789 1325 aa14.9□□□□□ -0.02
USP11-204ENST00000377107 POLR2DO15514 142 aaKnown RBP14.89□□□□□ -0.03
USP11-204ENST00000377107 CSF1RP07333 972 aa14.89□□□□□ -0.03
USP11-204ENST00000377107 UQCRFS1P1P0C7P4 283 aa14.89□□□□□ -0.03
USP11-204ENST00000377107 NLRP12P59046 1061 aa14.89□□□□□ -0.03
USP11-204ENST00000377107 LONRF3Q496Y0 759 aa14.89□□□□□ -0.03
USP11-204ENST00000377107 KCNH3Q9ULD8 1083 aa14.89□□□□□ -0.03
USP11-204ENST00000377107 NCBP1Q09161 790 aaKnown RBP14.89□□□□□ -0.03
USP11-204ENST00000377107 SLC39A14Q15043 492 aa14.89□□□□□ -0.03
USP11-204ENST00000377107 UTP14AQ9BVJ6 771 aaKnown RBP14.89□□□□□ -0.03
USP11-204ENST00000377107 FANCLQ9NW38 375 aa14.89□□□□□ -0.03
USP11-204ENST00000377107 DNAI1Q9UI46 699 aa14.89□□□□□ -0.03
USP11-204ENST00000377107 AFDNP55196 1824 aaKnown RBP14.89□□□□□ -0.03
USP11-204ENST00000377107 CYP19A1P11511 503 aaPredicted RBP14.89□□□□□ -0.03
USP11-204ENST00000377107 GRIN1Q05586 938 aa14.89□□□□□ -0.03
USP11-204ENST00000377107 ELF2Q15723 593 aa14.89□□□□□ -0.03
USP11-204ENST00000377107 PCDHA5Q9Y5H7 936 aa14.89□□□□□ -0.03
USP11-204ENST00000377107 TOP1P11387 765 aaKnown RBP14.88□□□□□ -0.03
USP11-204ENST00000377107 CMA1P23946 247 aa14.88□□□□□ -0.03
USP11-204ENST00000377107 SHC4Q6S5L8 630 aa14.88□□□□□ -0.03
USP11-204ENST00000377107 DPF2Q92785 391 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms