RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 MSANTD4Q8NCY6 345 aa15.38■□□□□ 0.05
GPC6-201ENST00000377047 ZFYVE16Q7Z3T8 1539 aa15.38■□□□□ 0.05
GPC6-201ENST00000377047 DNMT1P26358 1616 aaKnown RBP15.38■□□□□ 0.05
GPC6-201ENST00000377047 ARHGEF12Q9NZN5 1544 aa15.37■□□□□ 0.05
GPC6-201ENST00000377047 ARL1P40616 181 aaPredicted RBP15.37■□□□□ 0.05
GPC6-201ENST00000377047 DLGAP5Q15398 846 aa15.37■□□□□ 0.05
GPC6-201ENST00000377047 GPR162Q16538 588 aa15.37■□□□□ 0.05
GPC6-201ENST00000377047 IQUBQ8NA54 791 aa15.37■□□□□ 0.05
GPC6-201ENST00000377047 CGNQ9P2M7 1197 aaKnown RBP15.37■□□□□ 0.05
GPC6-201ENST00000377047 PIK3AP1Q6ZUJ8 805 aa15.37■□□□□ 0.05
GPC6-201ENST00000377047 CPXCR1Q8N123 301 aa15.37■□□□□ 0.05
GPC6-201ENST00000377047 ZNF496Q96IT1 587 aaPredicted RBP15.37■□□□□ 0.05
GPC6-201ENST00000377047 TMEM87BQ96K49 555 aa15.37■□□□□ 0.05
GPC6-201ENST00000377047 FERP16591 822 aa15.37■□□□□ 0.05
GPC6-201ENST00000377047 TGFBRAP1Q8WUH2 860 aa15.37■□□□□ 0.05
GPC6-201ENST00000377047 DDX39AO00148 427 aaKnown RBP15.37■□□□□ 0.05
GPC6-201ENST00000377047 ZBTB7BO15156 539 aaPredicted RBP15.37■□□□□ 0.05
GPC6-201ENST00000377047 RPS6KB1P23443 525 aa15.37■□□□□ 0.05
GPC6-201ENST00000377047 CKAP4Q07065 602 aaKnown RBP15.37■□□□□ 0.05
GPC6-201ENST00000377047 USH1GQ495M9 461 aa15.37■□□□□ 0.05
GPC6-201ENST00000377047 BBXQ8WY36 941 aaPredicted RBP15.37■□□□□ 0.05
GPC6-201ENST00000377047 FRMD4BQ9Y2L6 1034 aa15.37■□□□□ 0.05
GPC6-201ENST00000377047 CERS3Q8IU89 383 aa15.37■□□□□ 0.05
GPC6-201ENST00000377047 TMEM2Q9UHN6 1383 aa15.37■□□□□ 0.05
GPC6-201ENST00000377047 GCKRQ14397 625 aa15.37■□□□□ 0.05
GPC6-201ENST00000377047 GINS2Q9Y248 185 aa15.37■□□□□ 0.05
GPC6-201ENST00000377047 ERVV-2B6SEH9 535 aa15.36■□□□□ 0.05
GPC6-201ENST00000377047 DEXIO95424 95 aa15.36■□□□□ 0.05
GPC6-201ENST00000377047 FNBP1Q96RU3 617 aa15.36■□□□□ 0.05
GPC6-201ENST00000377047 RASAL2Q9UJF2 1139 aa15.36■□□□□ 0.05
GPC6-201ENST00000377047 SLC27A2O14975 620 aa15.36■□□□□ 0.05
GPC6-201ENST00000377047 CCDC175P0C221 793 aa15.36■□□□□ 0.05
GPC6-201ENST00000377047 SLC1A4P43007 532 aa15.36■□□□□ 0.05
GPC6-201ENST00000377047 TCIRG1Q13488 830 aa15.36■□□□□ 0.05
GPC6-201ENST00000377047 BIRC3Q13489 604 aa15.36■□□□□ 0.05
GPC6-201ENST00000377047 FAM200AQ8TCP9 573 aa15.36■□□□□ 0.05
GPC6-201ENST00000377047 V9GY48 417 aaPredicted RBP15.36■□□□□ 0.05
GPC6-201ENST00000377047 A0A1W2PRG0 241 aa15.36■□□□□ 0.05
GPC6-201ENST00000377047 RNF187Q5TA31 235 aaPredicted RBP15.36■□□□□ 0.05
GPC6-201ENST00000377047 H7C1D1 291 aa15.36■□□□□ 0.05
GPC6-201ENST00000377047 PLCB3Q01970 1234 aa15.36■□□□□ 0.05
GPC6-201ENST00000377047 DDX12PQ92771 950 aa15.36■□□□□ 0.05
GPC6-201ENST00000377047 CFAP65Q6ZU64 1925 aaKnown RBP15.36■□□□□ 0.05
GPC6-201ENST00000377047 TACC1O75410 805 aa15.36■□□□□ 0.05
GPC6-201ENST00000377047 SYT1P21579 422 aa15.36■□□□□ 0.05
GPC6-201ENST00000377047 RAPGEF1Q13905 1077 aa15.36■□□□□ 0.05
GPC6-201ENST00000377047 NDUFB9Q9Y6M9 179 aa15.36■□□□□ 0.05
GPC6-201ENST00000377047 KRT5P13647 590 aa15.35■□□□□ 0.05
GPC6-201ENST00000377047 RPL13P26373 211 aaKnown RBP15.35■□□□□ 0.05
GPC6-201ENST00000377047 LMBR1Q8WVP7 490 aa15.35■□□□□ 0.05
GPC6-201ENST00000377047 GTPBP4Q9BZE4 634 aaKnown RBP15.35■□□□□ 0.05
GPC6-201ENST00000377047 FNBP4Q8N3X1 1017 aaPredicted RBP15.35■□□□□ 0.05
GPC6-201ENST00000377047 SNX21Q969T3 373 aa15.35■□□□□ 0.05
GPC6-201ENST00000377047 SMTNP53814 917 aa15.35■□□□□ 0.05
GPC6-201ENST00000377047 CCDC155Q8N6L0 562 aa15.35■□□□□ 0.05
GPC6-201ENST00000377047 CHL1O00533 1208 aa15.35■□□□□ 0.05
GPC6-201ENST00000377047 ZNF830Q96NB3 372 aaPredicted RBP15.35■□□□□ 0.05
GPC6-201ENST00000377047 SKILP12757 684 aa15.35■□□□□ 0.05
GPC6-201ENST00000377047 GTF2IP78347 998 aa15.35■□□□□ 0.05
GPC6-201ENST00000377047 NCAPH2Q6IBW4 605 aa15.35■□□□□ 0.05
GPC6-201ENST00000377047 HSF2BPO75031 334 aa15.34■□□□□ 0.05
GPC6-201ENST00000377047 ZAP70P43403 619 aa15.34■□□□□ 0.05
GPC6-201ENST00000377047 CEP112Q8N8E3 955 aa15.34■□□□□ 0.05
GPC6-201ENST00000377047 IFT74Q96LB3 600 aa15.34■□□□□ 0.05
GPC6-201ENST00000377047 FAM227BQ96M60 508 aa15.34■□□□□ 0.05
GPC6-201ENST00000377047 CCDC42Q96M95 316 aa15.34■□□□□ 0.05
GPC6-201ENST00000377047 ZNF532Q9HCE3 1301 aa15.34■□□□□ 0.05
GPC6-201ENST00000377047 EPB41P11171 864 aaKnown RBP15.34■□□□□ 0.05
GPC6-201ENST00000377047 TXKP42681 527 aa15.34■□□□□ 0.05
GPC6-201ENST00000377047 IRX3P78415 501 aaPredicted RBP15.34■□□□□ 0.05
GPC6-201ENST00000377047 WDR44Q5JSH3 913 aa15.34■□□□□ 0.05
GPC6-201ENST00000377047 MAEAQ7L5Y9 396 aa15.34■□□□□ 0.05
GPC6-201ENST00000377047 USP26Q9BXU7 913 aa15.34■□□□□ 0.05
GPC6-201ENST00000377047 PLCD1P51178 756 aa15.34■□□□□ 0.05
GPC6-201ENST00000377047 TYRO3Q06418 890 aa15.34■□□□□ 0.05
GPC6-201ENST00000377047 STRN3Q13033 797 aa15.34■□□□□ 0.05
GPC6-201ENST00000377047 NSMFQ6X4W1 530 aa15.34■□□□□ 0.05
GPC6-201ENST00000377047 OTUD7AQ8TE49 926 aaPredicted RBP15.34■□□□□ 0.05
GPC6-201ENST00000377047 USP40Q9NVE5 1235 aa15.34■□□□□ 0.05
GPC6-201ENST00000377047 CTSWP56202 376 aa15.33■□□□□ 0.05
GPC6-201ENST00000377047 CCDC117Q8IWD4 279 aaPredicted RBP15.33■□□□□ 0.05
GPC6-201ENST00000377047 SREK1Q8WXA9 508 aaKnown RBP15.33■□□□□ 0.05
GPC6-201ENST00000377047 ANGEL1Q9UNK9 670 aaKnown RBP15.33■□□□□ 0.05
GPC6-201ENST00000377047 EIF4A1P60842 406 aaKnown RBP15.33■□□□□ 0.04
GPC6-201ENST00000377047 KRT83P78385 493 aa15.33■□□□□ 0.04
GPC6-201ENST00000377047 HAUS3Q68CZ6 603 aa15.33■□□□□ 0.04
GPC6-201ENST00000377047 UIMC1Q96RL1 719 aa15.33■□□□□ 0.04
GPC6-201ENST00000377047 TRAF5O00463 557 aa15.33■□□□□ 0.04
GPC6-201ENST00000377047 LTKP29376 864 aa15.33■□□□□ 0.04
GPC6-201ENST00000377047 KIF5AQ12840 1032 aa15.33■□□□□ 0.04
GPC6-201ENST00000377047 C2CD5Q86YS7 1000 aa15.33■□□□□ 0.04
GPC6-201ENST00000377047 TBC1D22AQ8WUA7 517 aa15.33■□□□□ 0.04
GPC6-201ENST00000377047 IQCGQ9H095 443 aaKnown RBP15.33■□□□□ 0.04
GPC6-201ENST00000377047 CTNND2Q9UQB3 1225 aa15.33■□□□□ 0.04
GPC6-201ENST00000377047 PZPP20742 1482 aa15.33■□□□□ 0.04
GPC6-201ENST00000377047 CEP170Q5SW79 1584 aa15.33■□□□□ 0.04
GPC6-201ENST00000377047 ADCY7P51828 1080 aa15.33■□□□□ 0.04
GPC6-201ENST00000377047 CCDC186Q7Z3E2 898 aa15.33■□□□□ 0.04
GPC6-201ENST00000377047 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.33■□□□□ 0.04
GPC6-201ENST00000377047 TTF2Q9UNY4 1162 aaKnown RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms