RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 ZSCAN26Q16670 478 aa18.98■□□□□ 0.63
TRIM39-201ENST00000376656 TC2NQ8N9U0 490 aa18.98■□□□□ 0.63
TRIM39-201ENST00000376656 DESI2Q9BSY9 194 aa18.98■□□□□ 0.63
TRIM39-201ENST00000376656 TSPYL1Q9H0U9 437 aa18.98■□□□□ 0.63
TRIM39-201ENST00000376656 C19orf44Q9H6X5 657 aa18.98■□□□□ 0.63
TRIM39-201ENST00000376656 PCDHA5Q9Y5H7 936 aa18.98■□□□□ 0.63
TRIM39-201ENST00000376656 PHRF1Q9P1Y6 1649 aaKnown RBP18.98■□□□□ 0.63
TRIM39-201ENST00000376656 FOXN1O15353 648 aa18.97■□□□□ 0.63
TRIM39-201ENST00000376656 KARSQ15046 597 aaKnown RBP18.97■□□□□ 0.63
TRIM39-201ENST00000376656 PTPAQ15257 358 aa18.97■□□□□ 0.63
TRIM39-201ENST00000376656 IMMTQ16891 758 aaKnown RBP18.97■□□□□ 0.63
TRIM39-201ENST00000376656 VPS37DQ86XT2 251 aa18.97■□□□□ 0.63
TRIM39-201ENST00000376656 RABGGTAQ92696 567 aa18.97■□□□□ 0.63
TRIM39-201ENST00000376656 H3BQF6 201 aa18.97■□□□□ 0.63
TRIM39-201ENST00000376656 FGAP02671 866 aa18.97■□□□□ 0.63
TRIM39-201ENST00000376656 LRRC24Q50LG9 513 aa18.97■□□□□ 0.63
TRIM39-201ENST00000376656 HSP90AB3PQ58FF7 597 aa18.97■□□□□ 0.63
TRIM39-201ENST00000376656 ZSWIM4Q9H7M6 989 aa18.97■□□□□ 0.63
TRIM39-201ENST00000376656 FKBP4Q02790 459 aaKnown RBP eCLIP18.96■□□□□ 0.63
TRIM39-201ENST00000376656 WASHC4Q2M389 1173 aa18.96■□□□□ 0.63
TRIM39-201ENST00000376656 ESCO1Q5FWF5 840 aa18.96■□□□□ 0.63
TRIM39-201ENST00000376656 RESP18Q5W5W9 173 aa18.96■□□□□ 0.63
TRIM39-201ENST00000376656 ZNF594Q96JF6 807 aaPredicted RBP18.96■□□□□ 0.63
TRIM39-201ENST00000376656 GOLGA6L9A6NEM1 432 aa18.96■□□□□ 0.63
TRIM39-201ENST00000376656 STX10O60499 249 aa18.96■□□□□ 0.63
TRIM39-201ENST00000376656 PPP6R2O75170 966 aa18.96■□□□□ 0.63
TRIM39-201ENST00000376656 LONRF2Q1L5Z9 754 aa18.96■□□□□ 0.63
TRIM39-201ENST00000376656 CCDC191Q8NCU4 936 aa18.96■□□□□ 0.63
TRIM39-201ENST00000376656 GOLGA1Q92805 767 aa18.96■□□□□ 0.63
TRIM39-201ENST00000376656 ALG1Q9BT22 464 aa18.96■□□□□ 0.63
TRIM39-201ENST00000376656 IRX2Q9BZI1 471 aaPredicted RBP18.96■□□□□ 0.63
TRIM39-201ENST00000376656 ADAMTS7Q9UKP4 1686 aa18.96■□□□□ 0.63
TRIM39-201ENST00000376656 ZBTB9Q96C00 473 aa18.95■□□□□ 0.62
TRIM39-201ENST00000376656 LCMT1Q9UIC8 334 aa18.95■□□□□ 0.62
TRIM39-201ENST00000376656 ADAM21Q9UKJ8 722 aa18.95■□□□□ 0.62
TRIM39-201ENST00000376656 KDM6AO15550 1401 aaPredicted RBP18.95■□□□□ 0.62
TRIM39-201ENST00000376656 A0A1B0GUL7 405 aa18.95■□□□□ 0.62
TRIM39-201ENST00000376656 CNNM3Q8NE01 707 aa18.95■□□□□ 0.62
TRIM39-201ENST00000376656 MAP3K14Q99558 947 aa18.95■□□□□ 0.62
TRIM39-201ENST00000376656 ARFGEF2Q9Y6D5 1785 aa18.95■□□□□ 0.62
TRIM39-201ENST00000376656 RXRAP19793 462 aa18.95■□□□□ 0.62
TRIM39-201ENST00000376656 MTF1Q14872 753 aa18.95■□□□□ 0.62
TRIM39-201ENST00000376656 KRT40Q6A162 431 aa18.95■□□□□ 0.62
TRIM39-201ENST00000376656 MRPL44Q9H9J2 332 aaKnown RBP18.95■□□□□ 0.62
TRIM39-201ENST00000376656 GPR108Q9NPR9 543 aa18.95■□□□□ 0.62
TRIM39-201ENST00000376656 C4AP0C0L4 1744 aa18.94■□□□□ 0.62
TRIM39-201ENST00000376656 C4BP0C0L5 1744 aa18.94■□□□□ 0.62
TRIM39-201ENST00000376656 FAM237AA0A1B0GTK4 181 aa18.94■□□□□ 0.62
TRIM39-201ENST00000376656 TXLNAP40222 546 aa18.94■□□□□ 0.62
TRIM39-201ENST00000376656 LMAN1P49257 510 aa18.94■□□□□ 0.62
TRIM39-201ENST00000376656 JMYQ8N9B5 988 aa18.94■□□□□ 0.62
TRIM39-201ENST00000376656 NCOA7Q8NI08 942 aa18.94■□□□□ 0.62
TRIM39-201ENST00000376656 CCDC12Q8WUD4 166 aaPredicted RBP18.94■□□□□ 0.62
TRIM39-201ENST00000376656 DENND2AQ9ULE3 1009 aa18.94■□□□□ 0.62
TRIM39-201ENST00000376656 MYO1BO43795 1136 aa18.94■□□□□ 0.62
TRIM39-201ENST00000376656 CCDC102BQ68D86 513 aa18.94■□□□□ 0.62
TRIM39-201ENST00000376656 RALYLQ86SE5 291 aaKnown RBP18.94■□□□□ 0.62
TRIM39-201ENST00000376656 IL15P40933 162 aaPredicted RBP18.94■□□□□ 0.62
TRIM39-201ENST00000376656 FMR1Q06787 632 aaKnown RBP eCLIP18.94■□□□□ 0.62
TRIM39-201ENST00000376656 SPECC1Q5M775 1068 aa18.94■□□□□ 0.62
TRIM39-201ENST00000376656 SPECC1LQ69YQ0 1117 aa18.94■□□□□ 0.62
TRIM39-201ENST00000376656 NKX2-3Q8TAU0 364 aa18.94■□□□□ 0.62
TRIM39-201ENST00000376656 KCNH3Q9ULD8 1083 aa18.94■□□□□ 0.62
TRIM39-201ENST00000376656 SNRPA1P09661 255 aaKnown RBP18.93■□□□□ 0.62
TRIM39-201ENST00000376656 LMOD2Q6P5Q4 547 aa18.93■□□□□ 0.62
TRIM39-201ENST00000376656 TICAM2Q86XR7 235 aa18.93■□□□□ 0.62
TRIM39-201ENST00000376656 TRMT44Q8IYL2 757 aaKnown RBP18.93■□□□□ 0.62
TRIM39-201ENST00000376656 PHKBQ93100 1093 aa18.93■□□□□ 0.62
TRIM39-201ENST00000376656 AK7Q96M32 723 aa18.93■□□□□ 0.62
TRIM39-201ENST00000376656 NFE2L3Q9Y4A8 694 aa18.93■□□□□ 0.62
TRIM39-201ENST00000376656 TRIM66O15016 1216 aa18.92■□□□□ 0.62
TRIM39-201ENST00000376656 IPO4Q8TEX9 1081 aaKnown RBP18.92■□□□□ 0.62
TRIM39-201ENST00000376656 EXOC4Q96A65 974 aa18.92■□□□□ 0.62
TRIM39-201ENST00000376656 PUS3Q9BZE2 481 aaKnown RBP18.92■□□□□ 0.62
TRIM39-201ENST00000376656 CCDC151A5D8V7 595 aa18.92■□□□□ 0.62
TRIM39-201ENST00000376656 H7C1W4 665 aa18.92■□□□□ 0.62
TRIM39-201ENST00000376656 MAP2K7O14733 419 aa18.92■□□□□ 0.62
TRIM39-201ENST00000376656 ZNF827Q17R98 1081 aa18.92■□□□□ 0.62
TRIM39-201ENST00000376656 PUS7LQ9H0K6 701 aaKnown RBP18.92■□□□□ 0.62
TRIM39-201ENST00000376656 MAN1B1Q9UKM7 699 aa18.92■□□□□ 0.62
TRIM39-201ENST00000376656 DDX60Q8IY21 1712 aaKnown RBP18.92■□□□□ 0.62
TRIM39-201ENST00000376656 A0A0U1RQJ8 604 aa18.91■□□□□ 0.62
TRIM39-201ENST00000376656 EYA2O00167 538 aa18.91■□□□□ 0.62
TRIM39-201ENST00000376656 ZNF18P17022 549 aa18.91■□□□□ 0.62
TRIM39-201ENST00000376656 MDM2Q00987 491 aaPredicted RBP18.91■□□□□ 0.62
TRIM39-201ENST00000376656 THEMISQ8N1K5 641 aaPredicted RBP18.91■□□□□ 0.62
TRIM39-201ENST00000376656 ATRIPQ8WXE1 791 aa18.91■□□□□ 0.62
TRIM39-201ENST00000376656 PUF60Q9UHX1 559 aaKnown RBP18.91■□□□□ 0.62
TRIM39-201ENST00000376656 MYO1CO00159 1063 aa18.91■□□□□ 0.62
TRIM39-201ENST00000376656 CUTAO60888 179 aa18.91■□□□□ 0.62
TRIM39-201ENST00000376656 C10orf67Q8IYJ2 551 aa18.91■□□□□ 0.62
TRIM39-201ENST00000376656 PLBD2Q8NHP8 589 aa18.91■□□□□ 0.62
TRIM39-201ENST00000376656 GOLGA5Q8TBA6 731 aa18.91■□□□□ 0.62
TRIM39-201ENST00000376656 LZTFL1Q9NQ48 299 aa18.91■□□□□ 0.62
TRIM39-201ENST00000376656 CPDO75976 1380 aa18.91■□□□□ 0.62
TRIM39-201ENST00000376656 ZNF213O14771 459 aa18.9■□□□□ 0.62
TRIM39-201ENST00000376656 CHMP4BP1P59074 171 aa18.9■□□□□ 0.62
TRIM39-201ENST00000376656 JAKMIP3Q5VZ66 844 aa18.9■□□□□ 0.62
TRIM39-201ENST00000376656 PLCD3Q8N3E9 789 aa18.9■□□□□ 0.62
TRIM39-201ENST00000376656 PSD3Q9NYI0 1048 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms