RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 ZFYP08048 801 aaPredicted RBP16.49■□□□□ 0.23
TNFRSF1B-201ENST00000376259 CYP7A1P22680 504 aa16.49■□□□□ 0.23
TNFRSF1B-201ENST00000376259 NLRP12P59046 1061 aa16.49■□□□□ 0.23
TNFRSF1B-201ENST00000376259 BMS1Q14692 1282 aaKnown RBP16.49■□□□□ 0.23
TNFRSF1B-201ENST00000376259 ENOX2Q16206 610 aaKnown RBP16.49■□□□□ 0.23
TNFRSF1B-201ENST00000376259 SERTAD1Q9UHV2 236 aa16.49■□□□□ 0.23
TNFRSF1B-201ENST00000376259 ZNF274Q96GC6 653 aaPredicted RBP16.48■□□□□ 0.23
TNFRSF1B-201ENST00000376259 PPP1R13BQ96KQ4 1090 aa16.48■□□□□ 0.23
TNFRSF1B-201ENST00000376259 WWC3Q9ULE0 1092 aa16.48■□□□□ 0.23
TNFRSF1B-201ENST00000376259 DLG5Q8TDM6 1919 aa16.48■□□□□ 0.23
TNFRSF1B-201ENST00000376259 NUTM2BA6NNL0 878 aaPredicted RBP16.48■□□□□ 0.23
TNFRSF1B-201ENST00000376259 NUTM2EB1AL46 878 aaPredicted RBP16.48■□□□□ 0.23
TNFRSF1B-201ENST00000376259 IPO7O95373 1038 aaKnown RBP16.48■□□□□ 0.23
TNFRSF1B-201ENST00000376259 ADAMTS2O95450 1211 aa16.48■□□□□ 0.23
TNFRSF1B-201ENST00000376259 LMAN1P49257 510 aa16.48■□□□□ 0.23
TNFRSF1B-201ENST00000376259 DMTNQ08495 405 aa16.48■□□□□ 0.23
TNFRSF1B-201ENST00000376259 NUTM2AQ8IVF1 878 aaPredicted RBP16.48■□□□□ 0.23
TNFRSF1B-201ENST00000376259 CCDC191Q8NCU4 936 aa16.48■□□□□ 0.23
TNFRSF1B-201ENST00000376259 SDR42E1Q8WUS8 393 aa16.48■□□□□ 0.23
TNFRSF1B-201ENST00000376259 DPF2Q92785 391 aa16.48■□□□□ 0.23
TNFRSF1B-201ENST00000376259 FEZ1Q99689 392 aa16.48■□□□□ 0.23
TNFRSF1B-201ENST00000376259 BRMS1Q9HCU9 246 aa16.48■□□□□ 0.23
TNFRSF1B-201ENST00000376259 VPS54Q9P1Q0 977 aa16.48■□□□□ 0.23
TNFRSF1B-201ENST00000376259 KMT5BQ4FZB7 885 aa16.48■□□□□ 0.23
TNFRSF1B-201ENST00000376259 SAMD1Q6SPF0 538 aaPredicted RBP16.48■□□□□ 0.23
TNFRSF1B-201ENST00000376259 BRAPQ7Z569 592 aa16.48■□□□□ 0.23
TNFRSF1B-201ENST00000376259 DHX40Q8IX18 779 aaKnown RBP16.48■□□□□ 0.23
TNFRSF1B-201ENST00000376259 BAG1Q99933 345 aaPredicted RBP16.48■□□□□ 0.23
TNFRSF1B-201ENST00000376259 N4BP3O15049 544 aa16.47■□□□□ 0.23
TNFRSF1B-201ENST00000376259 GPS2Q13227 327 aa16.47■□□□□ 0.23
TNFRSF1B-201ENST00000376259 HSP90B2PQ58FF3 399 aa16.47■□□□□ 0.23
TNFRSF1B-201ENST00000376259 GDAP1L1Q96MZ0 367 aa16.47■□□□□ 0.23
TNFRSF1B-201ENST00000376259 VWA3AA6NCI4 1184 aa16.47■□□□□ 0.23
TNFRSF1B-201ENST00000376259 ZSCAN20P17040 1043 aaPredicted RBP16.47■□□□□ 0.23
TNFRSF1B-201ENST00000376259 VPS16Q9H269 839 aa16.47■□□□□ 0.23
TNFRSF1B-201ENST00000376259 PODXL2Q9NZ53 605 aa16.47■□□□□ 0.23
TNFRSF1B-201ENST00000376259 CCP110O43303 1012 aa16.47■□□□□ 0.23
TNFRSF1B-201ENST00000376259 GTPBP4Q9BZE4 634 aaKnown RBP16.47■□□□□ 0.23
TNFRSF1B-201ENST00000376259 BLZF1Q9H2G9 400 aa16.47■□□□□ 0.23
TNFRSF1B-201ENST00000376259 FDPSP14324 419 aaKnown RBP16.46■□□□□ 0.23
TNFRSF1B-201ENST00000376259 IGHMBP2P38935 993 aaKnown RBP16.46■□□□□ 0.23
TNFRSF1B-201ENST00000376259 KRI1Q8N9T8 703 aaKnown RBP16.46■□□□□ 0.23
TNFRSF1B-201ENST00000376259 CEMIPQ8WUJ3 1361 aa16.46■□□□□ 0.23
TNFRSF1B-201ENST00000376259 ZBTB22O15209 634 aa16.46■□□□□ 0.23
TNFRSF1B-201ENST00000376259 WDHD1O75717 1129 aaPredicted RBP16.46■□□□□ 0.23
TNFRSF1B-201ENST00000376259 GYS2P54840 703 aa16.46■□□□□ 0.23
TNFRSF1B-201ENST00000376259 KIF23Q02241 960 aaPredicted RBP16.46■□□□□ 0.23
TNFRSF1B-201ENST00000376259 ATG9AQ7Z3C6 839 aa16.46■□□□□ 0.23
TNFRSF1B-201ENST00000376259 DRC1Q96MC2 740 aa16.46■□□□□ 0.23
TNFRSF1B-201ENST00000376259 UIMC1Q96RL1 719 aa16.46■□□□□ 0.23
TNFRSF1B-201ENST00000376259 RTEL1Q9NZ71 1219 aa16.46■□□□□ 0.23
TNFRSF1B-201ENST00000376259 CDC25AP30304 524 aa16.46■□□□□ 0.22
TNFRSF1B-201ENST00000376259 NLRP5P59047 1200 aa16.46■□□□□ 0.22
TNFRSF1B-201ENST00000376259 FMR1NBQ8N0W7 255 aaPredicted RBP16.46■□□□□ 0.22
TNFRSF1B-201ENST00000376259 USP42Q9H9J4 1324 aaKnown RBP16.46■□□□□ 0.22
TNFRSF1B-201ENST00000376259 VAT1LQ9HCJ6 419 aa16.46■□□□□ 0.22
TNFRSF1B-201ENST00000376259 MED23Q9ULK4 1368 aa16.45■□□□□ 0.22
TNFRSF1B-201ENST00000376259 SLC5A1P13866 664 aa16.45■□□□□ 0.22
TNFRSF1B-201ENST00000376259 V9GY48 417 aaPredicted RBP16.45■□□□□ 0.22
TNFRSF1B-201ENST00000376259 FAM170AA1A519 330 aa16.45■□□□□ 0.22
TNFRSF1B-201ENST00000376259 VGLL3A8MV65 326 aa16.45■□□□□ 0.22
TNFRSF1B-201ENST00000376259 KIF5CO60282 957 aa16.45■□□□□ 0.22
TNFRSF1B-201ENST00000376259 ZNF569Q5MCW4 686 aa16.45■□□□□ 0.22
TNFRSF1B-201ENST00000376259 ZCCHC17Q9NP64 241 aaKnown RBP16.45■□□□□ 0.22
TNFRSF1B-201ENST00000376259 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.45■□□□□ 0.22
TNFRSF1B-201ENST00000376259 IL2RBP14784 551 aa16.44■□□□□ 0.22
TNFRSF1B-201ENST00000376259 MATR3P43243 847 aaKnown RBP eCLIP16.44■□□□□ 0.222e-7■□□□□ 10.4
TNFRSF1B-201ENST00000376259 RRAGBQ5VZM2 374 aa16.44■□□□□ 0.22
TNFRSF1B-201ENST00000376259 NEK11Q8NG66 645 aa16.44■□□□□ 0.22
TNFRSF1B-201ENST00000376259 MCM7P33993 719 aa16.44■□□□□ 0.22
TNFRSF1B-201ENST00000376259 RFX5P48382 616 aaPredicted RBP16.44■□□□□ 0.22
TNFRSF1B-201ENST00000376259 ARMCX5Q6P1M9 558 aa16.44■□□□□ 0.22
TNFRSF1B-201ENST00000376259 APOA5Q6Q788 366 aa16.44■□□□□ 0.22
TNFRSF1B-201ENST00000376259 DACH1Q9UI36 760 aa16.44■□□□□ 0.22
TNFRSF1B-201ENST00000376259 YEATS4O95619 227 aa16.44■□□□□ 0.22
TNFRSF1B-201ENST00000376259 PDE6AP16499 860 aa16.44■□□□□ 0.22
TNFRSF1B-201ENST00000376259 BCAMP50895 628 aa16.44■□□□□ 0.22
TNFRSF1B-201ENST00000376259 TCIRG1Q13488 830 aa16.44■□□□□ 0.22
TNFRSF1B-201ENST00000376259 HLFQ16534 295 aa16.44■□□□□ 0.22
TNFRSF1B-201ENST00000376259 CYB5R4Q7L1T6 521 aa16.44■□□□□ 0.22
TNFRSF1B-201ENST00000376259 DZIP3Q86Y13 1208 aaKnown RBP16.44■□□□□ 0.22
TNFRSF1B-201ENST00000376259 TBC1D10CQ8IV04 446 aa16.44■□□□□ 0.22
TNFRSF1B-201ENST00000376259 LRRN4CLQ8ND94 238 aa16.44■□□□□ 0.22
TNFRSF1B-201ENST00000376259 IRX2Q9BZI1 471 aaPredicted RBP16.44■□□□□ 0.22
TNFRSF1B-201ENST00000376259 CDC27P30260 824 aa16.43■□□□□ 0.22
TNFRSF1B-201ENST00000376259 MCAMP43121 646 aa16.43■□□□□ 0.22
TNFRSF1B-201ENST00000376259 EIF5P55010 431 aaKnown RBP16.43■□□□□ 0.22
TNFRSF1B-201ENST00000376259 KCNQ4P56696 695 aa16.43■□□□□ 0.22
TNFRSF1B-201ENST00000376259 ETF1P62495 437 aaKnown RBP16.43■□□□□ 0.22
TNFRSF1B-201ENST00000376259 FOXO4P98177 505 aa16.43■□□□□ 0.22
TNFRSF1B-201ENST00000376259 RABEP2Q9H5N1 569 aa16.43■□□□□ 0.22
TNFRSF1B-201ENST00000376259 SAMSN1Q9NSI8 373 aaKnown RBP16.43■□□□□ 0.22
TNFRSF1B-201ENST00000376259 CYP2D7A0A087X1C5 515 aa16.43■□□□□ 0.22
TNFRSF1B-201ENST00000376259 SMARCC2Q8TAQ2 1214 aa16.43■□□□□ 0.22
TNFRSF1B-201ENST00000376259 WASF1Q92558 559 aa16.43■□□□□ 0.22
TNFRSF1B-201ENST00000376259 CAPZA3Q96KX2 299 aa16.43■□□□□ 0.22
TNFRSF1B-201ENST00000376259 PIH1D3Q9NQM4 214 aaKnown RBP16.43■□□□□ 0.22
TNFRSF1B-201ENST00000376259 PXDNQ92626 1479 aa16.43■□□□□ 0.22
TNFRSF1B-201ENST00000376259 SSBP05455 408 aaKnown RBP eCLIP16.43■□□□□ 0.22
TNFRSF1B-201ENST00000376259 ATP2B2Q01814 1243 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms