RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 ELP1O95163 1332 aa14.2□□□□□ -0.14
HMGCL-202ENST00000374487 LAMB2P55268 1798 aa14.2□□□□□ -0.14
HMGCL-202ENST00000374487 PTPDC1A2A3K4 754 aa14.2□□□□□ -0.14
HMGCL-202ENST00000374487 APPP05067 770 aa14.2□□□□□ -0.14
HMGCL-202ENST00000374487 SLC5A1P13866 664 aa14.2□□□□□ -0.14
HMGCL-202ENST00000374487 PDIA3P30101 505 aaKnown RBP14.2□□□□□ -0.14
HMGCL-202ENST00000374487 ADD2P35612 726 aa14.2□□□□□ -0.14
HMGCL-202ENST00000374487 PHKA1P46020 1223 aa14.2□□□□□ -0.14
HMGCL-202ENST00000374487 RALYLQ86SE5 291 aaKnown RBP14.2□□□□□ -0.14
HMGCL-202ENST00000374487 NSUN7Q8NE18 718 aaKnown RBP14.2□□□□□ -0.14
HMGCL-202ENST00000374487 ZNF526Q8TF50 670 aaPredicted RBP14.2□□□□□ -0.14
HMGCL-202ENST00000374487 PDLIM2Q96JY6 352 aa14.2□□□□□ -0.14
HMGCL-202ENST00000374487 FOXP2O15409 715 aa14.19□□□□□ -0.14
HMGCL-202ENST00000374487 MCM5P33992 734 aa14.19□□□□□ -0.14
HMGCL-202ENST00000374487 CCDC152Q4G0S7 254 aa14.19□□□□□ -0.14
HMGCL-202ENST00000374487 C9orf131Q5VYM1 1079 aa14.19□□□□□ -0.14
HMGCL-202ENST00000374487 NCOA7Q8NI08 942 aa14.19□□□□□ -0.14
HMGCL-202ENST00000374487 NCOA5Q9HCD5 579 aaKnown RBP14.19□□□□□ -0.14
HMGCL-202ENST00000374487 ARFGEF1Q9Y6D6 1849 aa14.19□□□□□ -0.14
HMGCL-202ENST00000374487 ARID4AP29374 1257 aaPredicted RBP14.19□□□□□ -0.14
HMGCL-202ENST00000374487 GIMAP6Q6P9H5 292 aa14.19□□□□□ -0.14
HMGCL-202ENST00000374487 ZSCAN30Q86W11 494 aa14.19□□□□□ -0.14
HMGCL-202ENST00000374487 RBM17Q96I25 401 aaKnown RBP14.19□□□□□ -0.14
HMGCL-202ENST00000374487 PIH1D3Q9NQM4 214 aaKnown RBP14.19□□□□□ -0.14
HMGCL-202ENST00000374487 PRC1O43663 620 aa14.18□□□□□ -0.14
HMGCL-202ENST00000374487 ALDH1B1P30837 517 aa14.18□□□□□ -0.14
HMGCL-202ENST00000374487 IGHMBP2P38935 993 aaKnown RBP14.18□□□□□ -0.14
HMGCL-202ENST00000374487 TRDNQ13061 729 aa14.18□□□□□ -0.14
HMGCL-202ENST00000374487 UBE3CQ15386 1083 aa14.18□□□□□ -0.14
HMGCL-202ENST00000374487 HS1BP3Q53T59 392 aa14.18□□□□□ -0.14
HMGCL-202ENST00000374487 LEO1Q8WVC0 666 aaPredicted RBP14.18□□□□□ -0.14
HMGCL-202ENST00000374487 CFAP45Q9UL16 551 aa14.18□□□□□ -0.14
HMGCL-202ENST00000374487 PPEF1O14829 653 aaPredicted RBP14.17□□□□□ -0.14
HMGCL-202ENST00000374487 CTDNEP1O95476 244 aa14.17□□□□□ -0.14
HMGCL-202ENST00000374487 FGFR2P21802 821 aa14.17□□□□□ -0.14
HMGCL-202ENST00000374487 MSNP26038 577 aaKnown RBP14.17□□□□□ -0.14
HMGCL-202ENST00000374487 FOSBP53539 338 aa14.17□□□□□ -0.14
HMGCL-202ENST00000374487 RESTQ13127 1097 aa14.17□□□□□ -0.14
HMGCL-202ENST00000374487 NAA16Q6N069 864 aaPredicted RBP14.17□□□□□ -0.14
HMGCL-202ENST00000374487 FBXL16Q8N461 479 aa14.17□□□□□ -0.14
HMGCL-202ENST00000374487 CRAMP1Q96RY5 1269 aa14.17□□□□□ -0.14
HMGCL-202ENST00000374487 RNF181Q9P0P0 153 aa14.17□□□□□ -0.14
HMGCL-202ENST00000374487 ZNF532Q9HCE3 1301 aa14.17□□□□□ -0.14
HMGCL-202ENST00000374487 DHX16O60231 1041 aaKnown RBP14.17□□□□□ -0.14
HMGCL-202ENST00000374487 SF3B3Q15393 1217 aaKnown RBP14.17□□□□□ -0.14
HMGCL-202ENST00000374487 UVSSAQ2YD98 709 aa14.17□□□□□ -0.14
HMGCL-202ENST00000374487 SPATA5Q8NB90 893 aa14.17□□□□□ -0.14
HMGCL-202ENST00000374487 ZNF277Q9NRM2 450 aaPredicted RBP14.17□□□□□ -0.14
HMGCL-202ENST00000374487 PDE6AP16499 860 aa14.16□□□□□ -0.14
HMGCL-202ENST00000374487 ZNF784Q8NCA9 323 aaPredicted RBP14.16□□□□□ -0.14
HMGCL-202ENST00000374487 AIDAQ96BJ3 306 aa14.16□□□□□ -0.14
HMGCL-202ENST00000374487 MYH3P11055 1940 aa14.16□□□□□ -0.14
HMGCL-202ENST00000374487 WTIPA6NIX2 430 aaPredicted RBP14.16□□□□□ -0.14
HMGCL-202ENST00000374487 PPFIA3O75145 1194 aa14.16□□□□□ -0.14
HMGCL-202ENST00000374487 EVCP57679 992 aa14.16□□□□□ -0.14
HMGCL-202ENST00000374487 MAP3K12Q12852 859 aa14.16□□□□□ -0.14
HMGCL-202ENST00000374487 NUP62CLQ9H1M0 184 aa14.16□□□□□ -0.14
HMGCL-202ENST00000374487 GPHNQ9NQX3 736 aaPredicted RBP14.16□□□□□ -0.14
HMGCL-202ENST00000374487 KLF18A0A0U1RQI7 1052 aa14.15□□□□□ -0.14
HMGCL-202ENST00000374487 SNAP23O00161 211 aa14.15□□□□□ -0.14
HMGCL-202ENST00000374487 CCDC192P0DO97 292 aa14.15□□□□□ -0.14
HMGCL-202ENST00000374487 GRAPQ13588 217 aa14.15□□□□□ -0.14
HMGCL-202ENST00000374487 MB21D2Q8IYB1 491 aaPredicted RBP14.15□□□□□ -0.14
HMGCL-202ENST00000374487 GRAPLQ8TC17 118 aaPredicted RBP14.15□□□□□ -0.14
HMGCL-202ENST00000374487 BICD2Q8TD16 824 aa14.15□□□□□ -0.14
HMGCL-202ENST00000374487 CHD4Q14839 1912 aa14.15□□□□□ -0.14
HMGCL-202ENST00000374487 LIG1P18858 919 aa14.15□□□□□ -0.15
HMGCL-202ENST00000374487 MAP3K11Q16584 847 aa14.15□□□□□ -0.15
HMGCL-202ENST00000374487 GPR101Q96P66 508 aaPredicted RBP14.15□□□□□ -0.15
HMGCL-202ENST00000374487 DACT1Q9NYF0 836 aa14.15□□□□□ -0.15
HMGCL-202ENST00000374487 CCDC39Q9UFE4 941 aa14.15□□□□□ -0.15
HMGCL-202ENST00000374487 SNED1Q8TER0 1413 aa14.14□□□□□ -0.15
HMGCL-202ENST00000374487 GOLGA8BA8MQT2 603 aa14.14□□□□□ -0.15
HMGCL-202ENST00000374487 CPLX1O14810 134 aa14.14□□□□□ -0.15
HMGCL-202ENST00000374487 PTMAP06454 111 aaKnown RBP14.14□□□□□ -0.15
HMGCL-202ENST00000374487 CEBPZQ03701 1054 aaKnown RBP14.14□□□□□ -0.15
HMGCL-202ENST00000374487 RASGRF1Q13972 1273 aa14.14□□□□□ -0.15
HMGCL-202ENST00000374487 CAMK4Q16566 473 aa14.14□□□□□ -0.15
HMGCL-202ENST00000374487 CCDC93Q567U6 631 aa14.14□□□□□ -0.15
HMGCL-202ENST00000374487 TAOK3Q9H2K8 898 aa14.14□□□□□ -0.15
HMGCL-202ENST00000374487 TNMDQ9H2S6 317 aa14.14□□□□□ -0.15
HMGCL-202ENST00000374487 LAMA4Q16363 1823 aa14.14□□□□□ -0.15
HMGCL-202ENST00000374487 SALL1Q9NSC2 1324 aa14.14□□□□□ -0.15
HMGCL-202ENST00000374487 MAGEB6Q8N7X4 407 aa14.13□□□□□ -0.15
HMGCL-202ENST00000374487 ATP6V0A2Q9Y487 856 aa14.13□□□□□ -0.15
HMGCL-202ENST00000374487 WDR19Q8NEZ3 1342 aa14.13□□□□□ -0.15
HMGCL-202ENST00000374487 TCRBV5S4A2TA0A5A2 114 aa14.13□□□□□ -0.15
HMGCL-202ENST00000374487 LMNB1P20700 586 aa14.13□□□□□ -0.15
HMGCL-202ENST00000374487 GUCY1B3Q02153 619 aa14.13□□□□□ -0.15
HMGCL-202ENST00000374487 ZNF396Q96N95 335 aaPredicted RBP14.13□□□□□ -0.15
HMGCL-202ENST00000374487 STRBPQ96SI9 672 aaKnown RBP14.13□□□□□ -0.15
HMGCL-202ENST00000374487 CDC5LQ99459 802 aaKnown RBP14.13□□□□□ -0.15
HMGCL-202ENST00000374487 FUCA2Q9BTY2 467 aa14.13□□□□□ -0.15
HMGCL-202ENST00000374487 DDX19AQ9NUU7 478 aaKnown RBP14.13□□□□□ -0.15
HMGCL-202ENST00000374487 NOL7Q9UMY1 257 aaKnown RBP14.13□□□□□ -0.15
HMGCL-202ENST00000374487 RTL9Q8NET4 1388 aa14.12□□□□□ -0.15
HMGCL-202ENST00000374487 BCAMP50895 628 aa14.12□□□□□ -0.15
HMGCL-202ENST00000374487 ANTXR2P58335 489 aa14.12□□□□□ -0.15
HMGCL-202ENST00000374487 RPS8P62241 208 aaKnown RBP14.12□□□□□ -0.15
HMGCL-202ENST00000374487 CHRNDQ07001 517 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms