RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 ATG9AQ7Z3C6 839 aa20.31■□□□□ 0.84
TRAF3IP1-201ENST00000373327 CCDC47Q96A33 483 aaKnown RBP20.31■□□□□ 0.84
TRAF3IP1-201ENST00000373327 PIH1D3Q9NQM4 214 aaKnown RBP20.31■□□□□ 0.84
TRAF3IP1-201ENST00000373327 AATFQ9NY61 560 aaKnown RBP eCLIP20.31■□□□□ 0.84
TRAF3IP1-201ENST00000373327 LPIN2Q92539 896 aa20.3■□□□□ 0.84
TRAF3IP1-201ENST00000373327 RNF216Q9NWF9 866 aaPredicted RBP20.3■□□□□ 0.84
TRAF3IP1-201ENST00000373327 PDE8BO95263 885 aa20.3■□□□□ 0.84
TRAF3IP1-201ENST00000373327 FAM47AQ5JRC9 791 aa20.3■□□□□ 0.84
TRAF3IP1-201ENST00000373327 SPATA31A3Q5VYP0 1347 aa20.3■□□□□ 0.84
TRAF3IP1-201ENST00000373327 NLRP10Q86W26 655 aa20.3■□□□□ 0.84
TRAF3IP1-201ENST00000373327 ZNF444Q8N0Y2 327 aaPredicted RBP20.3■□□□□ 0.84
TRAF3IP1-201ENST00000373327 NOC3LQ8WTT2 800 aaKnown RBP20.3■□□□□ 0.84
TRAF3IP1-201ENST00000373327 XPO4Q9C0E2 1151 aaKnown RBP20.3■□□□□ 0.84
TRAF3IP1-201ENST00000373327 DENND2AQ9ULE3 1009 aa20.3■□□□□ 0.84
TRAF3IP1-201ENST00000373327 CYP2D7A0A087X1C5 515 aa20.3■□□□□ 0.84
TRAF3IP1-201ENST00000373327 PFKFB1P16118 471 aa20.3■□□□□ 0.84
TRAF3IP1-201ENST00000373327 MAP3K15Q6ZN16 1313 aa20.29■□□□□ 0.84
TRAF3IP1-201ENST00000373327 MCM7P33993 719 aa20.29■□□□□ 0.84
TRAF3IP1-201ENST00000373327 GNG11P61952 73 aa20.29■□□□□ 0.84
TRAF3IP1-201ENST00000373327 DPCR1Q3MIW9 517 aa20.29■□□□□ 0.84
TRAF3IP1-201ENST00000373327 ZSCAN29Q8IWY8 852 aaPredicted RBP20.29■□□□□ 0.84
TRAF3IP1-201ENST00000373327 CDK5RAP3Q96JB5 506 aa20.29■□□□□ 0.84
TRAF3IP1-201ENST00000373327 SETDB2Q96T68 719 aa20.29■□□□□ 0.84
TRAF3IP1-201ENST00000373327 DACH1Q9UI36 760 aa20.29■□□□□ 0.84
TRAF3IP1-201ENST00000373327 CEP131Q9UPN4 1083 aa20.29■□□□□ 0.84
TRAF3IP1-201ENST00000373327 KARSQ15046 597 aaKnown RBP20.29■□□□□ 0.84
TRAF3IP1-201ENST00000373327 BRAPQ7Z569 592 aa20.29■□□□□ 0.84
TRAF3IP1-201ENST00000373327 ARGLU1Q9NWB6 273 aaPredicted RBP20.29■□□□□ 0.84
TRAF3IP1-201ENST00000373327 ZNF609O15014 1411 aa20.29■□□□□ 0.84
TRAF3IP1-201ENST00000373327 CARMIL3Q8ND23 1372 aa20.29■□□□□ 0.84
TRAF3IP1-201ENST00000373327 VWA3AA6NCI4 1184 aa20.29■□□□□ 0.84
TRAF3IP1-201ENST00000373327 MPHOSPH10O00566 681 aaKnown RBP20.29■□□□□ 0.84
TRAF3IP1-201ENST00000373327 ENOX2Q16206 610 aaKnown RBP20.29■□□□□ 0.84
TRAF3IP1-201ENST00000373327 IFNL3Q8IZI9 196 aa20.29■□□□□ 0.84
TRAF3IP1-201ENST00000373327 FBXO18Q8NFZ0 1043 aa20.29■□□□□ 0.84
TRAF3IP1-201ENST00000373327 KCNH3Q9ULD8 1083 aa20.29■□□□□ 0.84
TRAF3IP1-201ENST00000373327 A0A0U1RQG5 324 aaPredicted RBP20.28■□□□□ 0.84
TRAF3IP1-201ENST00000373327 ZNF274Q96GC6 653 aaPredicted RBP20.28■□□□□ 0.84
TRAF3IP1-201ENST00000373327 NLRP3Q96P20 1036 aa20.28■□□□□ 0.84
TRAF3IP1-201ENST00000373327 CCDC194A0A1B0GVG4 234 aa20.28■□□□□ 0.84
TRAF3IP1-201ENST00000373327 U2AF2P26368 475 aaKnown RBP eCLIP20.28■□□□□ 0.84
TRAF3IP1-201ENST00000373327 TTLL11Q8NHH1 800 aa20.28■□□□□ 0.84
TRAF3IP1-201ENST00000373327 CACTINQ8WUQ7 758 aaKnown RBP20.28■□□□□ 0.84
TRAF3IP1-201ENST00000373327 PDLIM2Q96JY6 352 aa20.28■□□□□ 0.84
TRAF3IP1-201ENST00000373327 SOGA3Q5TF21 947 aa20.28■□□□□ 0.84
TRAF3IP1-201ENST00000373327 CARD10Q9BWT7 1032 aa20.28■□□□□ 0.84
TRAF3IP1-201ENST00000373327 CNNM2Q9H8M5 875 aa20.28■□□□□ 0.84
TRAF3IP1-201ENST00000373327 SAP30BPQ9UHR5 308 aaKnown RBP20.27■□□□□ 0.84
TRAF3IP1-201ENST00000373327 GSDMDP57764 484 aa20.27■□□□□ 0.84
TRAF3IP1-201ENST00000373327 CAVIN2O95810 425 aa20.27■□□□□ 0.84
TRAF3IP1-201ENST00000373327 ARHGAP29Q52LW3 1261 aa20.27■□□□□ 0.84
TRAF3IP1-201ENST00000373327 CCDC87Q9NVE4 849 aa20.27■□□□□ 0.84
TRAF3IP1-201ENST00000373327 MAGEC2Q9UBF1 373 aaPredicted RBP20.27■□□□□ 0.84
TRAF3IP1-201ENST00000373327 TRIM75PA6NK02 468 aa20.27■□□□□ 0.83
TRAF3IP1-201ENST00000373327 GNPATO15228 680 aa20.27■□□□□ 0.83
TRAF3IP1-201ENST00000373327 EEF2KMTQ96G04 330 aa20.27■□□□□ 0.83
TRAF3IP1-201ENST00000373327 ERCC3P19447 782 aa20.26■□□□□ 0.83
TRAF3IP1-201ENST00000373327 DNA2P51530 1060 aa20.26■□□□□ 0.83
TRAF3IP1-201ENST00000373327 TANGO6Q9C0B7 1094 aa20.26■□□□□ 0.83
TRAF3IP1-201ENST00000373327 KAT14Q9H8E8 782 aa20.26■□□□□ 0.83
TRAF3IP1-201ENST00000373327 POLR3GO15318 223 aaPredicted RBP20.26■□□□□ 0.83
TRAF3IP1-201ENST00000373327 GOLPH3LQ9H4A5 285 aa20.26■□□□□ 0.83
TRAF3IP1-201ENST00000373327 HEATR3Q7Z4Q2 680 aa20.26■□□□□ 0.83
TRAF3IP1-201ENST00000373327 KRI1Q8N9T8 703 aaKnown RBP20.26■□□□□ 0.83
TRAF3IP1-201ENST00000373327 KIAA1468Q9P260 1216 aa20.26■□□□□ 0.83
TRAF3IP1-201ENST00000373327 RFX5P48382 616 aaPredicted RBP20.25■□□□□ 0.83
TRAF3IP1-201ENST00000373327 GRAMD1CQ8IYS0 662 aa20.25■□□□□ 0.83
TRAF3IP1-201ENST00000373327 CAGE1Q8TC20 777 aa20.25■□□□□ 0.83
TRAF3IP1-201ENST00000373327 BCL2L12Q9HB09 334 aa20.25■□□□□ 0.83
TRAF3IP1-201ENST00000373327 EIF5P55010 431 aaKnown RBP20.25■□□□□ 0.83
TRAF3IP1-201ENST00000373327 FANCCQ00597 558 aa20.25■□□□□ 0.83
TRAF3IP1-201ENST00000373327 MYRIPQ8NFW9 859 aa20.25■□□□□ 0.83
TRAF3IP1-201ENST00000373327 NUP88Q99567 741 aaPredicted RBP20.25■□□□□ 0.83
TRAF3IP1-201ENST00000373327 RFC4P35249 363 aa20.24■□□□□ 0.83
TRAF3IP1-201ENST00000373327 ST3GAL1Q11201 340 aa20.24■□□□□ 0.83
TRAF3IP1-201ENST00000373327 NR5A1Q13285 461 aa20.24■□□□□ 0.83
TRAF3IP1-201ENST00000373327 PICALMQ13492 652 aa20.24■□□□□ 0.83
TRAF3IP1-201ENST00000373327 AKNAD1Q5T1N1 836 aa20.24■□□□□ 0.83
TRAF3IP1-201ENST00000373327 ADALQ6DHV7 355 aa20.24■□□□□ 0.83
TRAF3IP1-201ENST00000373327 APOA5Q6Q788 366 aa20.24■□□□□ 0.83
TRAF3IP1-201ENST00000373327 ATG3Q9NT62 314 aa20.24■□□□□ 0.83
TRAF3IP1-201ENST00000373327 RRAGBQ5VZM2 374 aa20.24■□□□□ 0.83
TRAF3IP1-201ENST00000373327 TRMT1LQ7Z2T5 733 aaKnown RBP20.24■□□□□ 0.83
TRAF3IP1-201ENST00000373327 LZTFL1Q9NQ48 299 aa20.24■□□□□ 0.83
TRAF3IP1-201ENST00000373327 CCT6AP40227 531 aaKnown RBP20.24■□□□□ 0.83
TRAF3IP1-201ENST00000373327 CRNKL1Q9BZJ0 848 aaKnown RBP20.24■□□□□ 0.83
TRAF3IP1-201ENST00000373327 DLG5Q8TDM6 1919 aa20.24■□□□□ 0.83
TRAF3IP1-201ENST00000373327 USP17L12C9JPN9 530 aa20.24■□□□□ 0.83
TRAF3IP1-201ENST00000373327 USP17L21D6R901 530 aa20.24■□□□□ 0.83
TRAF3IP1-201ENST00000373327 TBC1D10CQ8IV04 446 aa20.24■□□□□ 0.83
TRAF3IP1-201ENST00000373327 C1orf167Q5SNV9 1468 aa20.24■□□□□ 0.83
TRAF3IP1-201ENST00000373327 IDEP14735 1019 aa20.23■□□□□ 0.83
TRAF3IP1-201ENST00000373327 TMEM87AQ8NBN3 555 aa20.23■□□□□ 0.83
TRAF3IP1-201ENST00000373327 N4BP3O15049 544 aa20.23■□□□□ 0.83
TRAF3IP1-201ENST00000373327 DYNLL1P63167 89 aaKnown RBP20.23■□□□□ 0.83
TRAF3IP1-201ENST00000373327 RASGRF1Q13972 1273 aa20.23■□□□□ 0.83
TRAF3IP1-201ENST00000373327 KIF4BQ2VIQ3 1234 aa20.23■□□□□ 0.83
TRAF3IP1-201ENST00000373327 LCORLQ8N3X6 602 aa20.23■□□□□ 0.83
TRAF3IP1-201ENST00000373327 ZSWIM5Q9P217 1185 aa20.23■□□□□ 0.83
TRAF3IP1-201ENST00000373327 CRKLP46109 303 aaKnown RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms