RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 PARP4Q9UKK3 1724 aaKnown RBP7.51□□□□□ -1.21
CHD6-202ENST00000373222 IFIT1P09914 478 aaKnown RBP7.51□□□□□ -1.21
CHD6-202ENST00000373222 RESTQ13127 1097 aa7.51□□□□□ -1.21
CHD6-202ENST00000373222 TSGA10IPQ3SY00 556 aa7.51□□□□□ -1.21
CHD6-202ENST00000373222 HS1BP3Q53T59 392 aa7.51□□□□□ -1.21
CHD6-202ENST00000373222 GORABQ5T7V8 394 aa7.51□□□□□ -1.21
CHD6-202ENST00000373222 EFCAB3Q8N7B9 438 aa7.51□□□□□ -1.21
CHD6-202ENST00000373222 KLHL42Q9P2K6 505 aa7.51□□□□□ -1.21
CHD6-202ENST00000373222 MRVI1Q9Y6F6 885 aa7.51□□□□□ -1.21
CHD6-202ENST00000373222 PCDH11XQ9BZA7 1347 aa7.51□□□□□ -1.21
CHD6-202ENST00000373222 PCDH11YQ9BZA8 1340 aa7.51□□□□□ -1.21
CHD6-202ENST00000373222 AKAP11Q9UKA4 1901 aa7.5□□□□□ -1.21
CHD6-202ENST00000373222 E7EWF7 191 aa7.5□□□□□ -1.21
CHD6-202ENST00000373222 EYA2O00167 538 aa7.5□□□□□ -1.21
CHD6-202ENST00000373222 NSUN7Q8NE18 718 aaKnown RBP7.5□□□□□ -1.21
CHD6-202ENST00000373222 VTI1AQ96AJ9 217 aa7.5□□□□□ -1.21
CHD6-202ENST00000373222 PUS7LQ9H0K6 701 aaKnown RBP7.5□□□□□ -1.21
CHD6-202ENST00000373222 HMG20BQ9P0W2 317 aa7.5□□□□□ -1.21
CHD6-202ENST00000373222 NRBP1Q9UHY1 535 aa7.5□□□□□ -1.21
CHD6-202ENST00000373222 PYCARDQ9ULZ3 195 aa7.5□□□□□ -1.21
CHD6-202ENST00000373222 ITGB4P16144 1822 aa7.5□□□□□ -1.21
CHD6-202ENST00000373222 MYH7P12883 1935 aa7.5□□□□□ -1.21
CHD6-202ENST00000373222 UQCRHLA0A096LP55 91 aa7.5□□□□□ -1.21
CHD6-202ENST00000373222 PTPDC1A2A3K4 754 aa7.5□□□□□ -1.21
CHD6-202ENST00000373222 UQCRHP07919 91 aa7.5□□□□□ -1.21
CHD6-202ENST00000373222 IL2RBP14784 551 aa7.5□□□□□ -1.21
CHD6-202ENST00000373222 TYRO3Q06418 890 aa7.5□□□□□ -1.21
CHD6-202ENST00000373222 ANO6Q4KMQ2 910 aa7.5□□□□□ -1.21
CHD6-202ENST00000373222 ZMYM1Q5SVZ6 1142 aa7.5□□□□□ -1.21
CHD6-202ENST00000373222 MYSM1Q5VVJ2 828 aa7.5□□□□□ -1.21
CHD6-202ENST00000373222 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.5□□□□□ -1.21
CHD6-202ENST00000373222 PIGBQ92521 554 aa7.5□□□□□ -1.21
CHD6-202ENST00000373222 SLC4A9Q96Q91 983 aa7.5□□□□□ -1.21
CHD6-202ENST00000373222 BEGAINQ9BUH8 593 aa7.5□□□□□ -1.21
CHD6-202ENST00000373222 NUP62CLQ9H1M0 184 aa7.5□□□□□ -1.21
CHD6-202ENST00000373222 GOLPH3LQ9H4A5 285 aa7.5□□□□□ -1.21
CHD6-202ENST00000373222 FAM13BQ9NYF5 915 aa7.5□□□□□ -1.21
CHD6-202ENST00000373222 CPDO75976 1380 aa7.49□□□□□ -1.21
CHD6-202ENST00000373222 PAPPAQ13219 1627 aa7.49□□□□□ -1.21
CHD6-202ENST00000373222 ABCA3Q99758 1704 aa7.49□□□□□ -1.21
CHD6-202ENST00000373222 PSDA5PKW4 1024 aaPredicted RBP7.49□□□□□ -1.21
CHD6-202ENST00000373222 H3BQV1 296 aa7.49□□□□□ -1.21
CHD6-202ENST00000373222 ADD1P35611 737 aaKnown RBP7.49□□□□□ -1.21
CHD6-202ENST00000373222 ZAP70P43403 619 aa7.49□□□□□ -1.21
CHD6-202ENST00000373222 HSP90AA2PQ14568 343 aaPredicted RBP7.49□□□□□ -1.21
CHD6-202ENST00000373222 ANKRD1Q15327 319 aa7.49□□□□□ -1.21
CHD6-202ENST00000373222 BICD2Q8TD16 824 aa7.49□□□□□ -1.21
CHD6-202ENST00000373222 XAGE2Q96GT9 111 aa7.49□□□□□ -1.21
CHD6-202ENST00000373222 DNAJC25Q9H1X3 360 aa7.49□□□□□ -1.21
CHD6-202ENST00000373222 INCENPQ9NQS7 918 aa7.49□□□□□ -1.21
CHD6-202ENST00000373222 SH3TC1Q8TE82 1336 aa7.49□□□□□ -1.21
CHD6-202ENST00000373222 UBE2Q2LH0YL09 131 aa7.49□□□□□ -1.21
CHD6-202ENST00000373222 FDPSP14324 419 aaKnown RBP7.49□□□□□ -1.21
CHD6-202ENST00000373222 RXRAP19793 462 aa7.49□□□□□ -1.21
CHD6-202ENST00000373222 IL15P40933 162 aaPredicted RBP7.49□□□□□ -1.21
CHD6-202ENST00000373222 EXOSC10Q01780 885 aaKnown RBP7.49□□□□□ -1.21
CHD6-202ENST00000373222 TAGLNQ01995 201 aaKnown RBP7.49□□□□□ -1.21
CHD6-202ENST00000373222 LRMPQ12912 555 aa7.49□□□□□ -1.21
CHD6-202ENST00000373222 WASHC4Q2M389 1173 aa7.49□□□□□ -1.21
CHD6-202ENST00000373222 NPAS4Q8IUM7 802 aa7.49□□□□□ -1.21
CHD6-202ENST00000373222 HELBQ8NG08 1087 aaPredicted RBP7.49□□□□□ -1.21
CHD6-202ENST00000373222 KCTD12Q96CX2 325 aaKnown RBP7.49□□□□□ -1.21
CHD6-202ENST00000373222 USP28Q96RU2 1077 aa7.49□□□□□ -1.21
CHD6-202ENST00000373222 TNMDQ9H2S6 317 aa7.49□□□□□ -1.21
CHD6-202ENST00000373222 GREM2Q9H772 168 aa7.49□□□□□ -1.21
CHD6-202ENST00000373222 CBX8Q9HC52 389 aa7.49□□□□□ -1.21
CHD6-202ENST00000373222 PALM3A6NDB9 673 aaPredicted RBP7.48□□□□□ -1.21
CHD6-202ENST00000373222 GOLGA6L4A6NEF3 574 aa7.48□□□□□ -1.21
CHD6-202ENST00000373222 VAMP1P23763 118 aa7.48□□□□□ -1.21
CHD6-202ENST00000373222 LMOD1P29536 600 aaPredicted RBP7.48□□□□□ -1.21
CHD6-202ENST00000373222 SSTR3P32745 418 aaPredicted RBP7.48□□□□□ -1.21
CHD6-202ENST00000373222 MAP3K11Q16584 847 aa7.48□□□□□ -1.21
CHD6-202ENST00000373222 PHLDB3Q6NSJ2 640 aa7.48□□□□□ -1.21
CHD6-202ENST00000373222 DHX32Q7L7V1 743 aaKnown RBP7.48□□□□□ -1.21
CHD6-202ENST00000373222 CCDC191Q8NCU4 936 aa7.48□□□□□ -1.21
CHD6-202ENST00000373222 SYTL4Q96C24 671 aaPredicted RBP7.48□□□□□ -1.21
CHD6-202ENST00000373222 SENP2Q9HC62 589 aa7.48□□□□□ -1.21
CHD6-202ENST00000373222 SLAIN2Q9P270 581 aa7.48□□□□□ -1.21
CHD6-202ENST00000373222 DCCP43146 1447 aa7.48□□□□□ -1.21
CHD6-202ENST00000373222 SPDYE16A6NNV3 312 aaPredicted RBP7.47□□□□□ -1.21
CHD6-202ENST00000373222 ERVV-2B6SEH9 535 aa7.47□□□□□ -1.21
CHD6-202ENST00000373222 MAFGO15525 162 aa7.47□□□□□ -1.21
CHD6-202ENST00000373222 RNF113AO15541 343 aaKnown RBP7.47□□□□□ -1.21
CHD6-202ENST00000373222 PFKFB2O60825 505 aa7.47□□□□□ -1.21
CHD6-202ENST00000373222 ATG7O95352 703 aa7.47□□□□□ -1.21
CHD6-202ENST00000373222 CCDC192P0DO97 292 aa7.47□□□□□ -1.21
CHD6-202ENST00000373222 PDCP20941 246 aa7.47□□□□□ -1.21
CHD6-202ENST00000373222 PTGS1P23219 599 aa7.47□□□□□ -1.21
CHD6-202ENST00000373222 PDIA3P30101 505 aaKnown RBP7.47□□□□□ -1.21
CHD6-202ENST00000373222 MCAMP43121 646 aa7.47□□□□□ -1.21
CHD6-202ENST00000373222 EVA1CP58658 441 aa7.47□□□□□ -1.21
CHD6-202ENST00000373222 KIAA2012Q0VF49 1180 aa7.47□□□□□ -1.21
CHD6-202ENST00000373222 CCDC57Q2TAC2 916 aa7.47□□□□□ -1.21
CHD6-202ENST00000373222 DNTTIP2Q5QJE6 756 aaKnown RBP7.47□□□□□ -1.21
CHD6-202ENST00000373222 C11orf57Q6ZUT1 292 aaPredicted RBP7.47□□□□□ -1.21
CHD6-202ENST00000373222 LARGE2Q8N3Y3 721 aa7.47□□□□□ -1.21
CHD6-202ENST00000373222 FAM184AQ8NB25 1140 aa7.47□□□□□ -1.21
CHD6-202ENST00000373222 SMARCC2Q8TAQ2 1214 aa7.47□□□□□ -1.21
CHD6-202ENST00000373222 AIFM3Q96NN9 605 aa7.47□□□□□ -1.21
CHD6-202ENST00000373222 ISCA1Q9BUE6 129 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms