RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 MECOMQ03112 1051 aa29.36■■■□□ 2.29
CTSA-203ENST00000372459 MFSD6Q6ZSS7 791 aa29.36■■■□□ 2.29
CTSA-203ENST00000372459 ZNF384Q8TF68 577 aa29.36■■■□□ 2.29
CTSA-203ENST00000372459 STAG1Q8WVM7 1258 aa29.36■■■□□ 2.29
CTSA-203ENST00000372459 CRAMP1Q96RY5 1269 aa29.36■■■□□ 2.29
CTSA-203ENST00000372459 GOLGA8BA8MQT2 603 aa29.35■■■□□ 2.29
CTSA-203ENST00000372459 ATP2B4P23634 1241 aa29.35■■■□□ 2.29
CTSA-203ENST00000372459 GPSM2P81274 684 aa29.35■■■□□ 2.29
CTSA-203ENST00000372459 DNM1Q05193 864 aaKnown RBP29.35■■■□□ 2.29
CTSA-203ENST00000372459 SPTY2D1Q68D10 685 aaPredicted RBP29.35■■■□□ 2.29
CTSA-203ENST00000372459 ZNF804AQ7Z570 1209 aa29.35■■■□□ 2.29
CTSA-203ENST00000372459 SALL1Q9NSC2 1324 aa29.35■■■□□ 2.29
CTSA-203ENST00000372459 H3BQV1 296 aa29.35■■■□□ 2.29
CTSA-203ENST00000372459 SH2B2O14492 632 aaPredicted RBP29.35■■■□□ 2.29
CTSA-203ENST00000372459 IGSF3O75054 1194 aa29.35■■■□□ 2.29
CTSA-203ENST00000372459 MRE11P49959 708 aa29.35■■■□□ 2.29
CTSA-203ENST00000372459 IFFO2Q5TF58 517 aa29.35■■■□□ 2.29
CTSA-203ENST00000372459 SLC51AQ86UW1 340 aa29.34■■■□□ 2.29
CTSA-203ENST00000372459 FERMT3Q86UX7 667 aa29.34■■■□□ 2.29
CTSA-203ENST00000372459 SDR42E1Q8WUS8 393 aa29.34■■■□□ 2.29
CTSA-203ENST00000372459 RNF41Q9H4P4 317 aaPredicted RBP29.34■■■□□ 2.29
CTSA-203ENST00000372459 NSFL1CQ9UNZ2 370 aaKnown RBP29.34■■■□□ 2.29
CTSA-203ENST00000372459 MAST2Q6P0Q8 1798 aa29.34■■■□□ 2.29
CTSA-203ENST00000372459 TDRD7Q8NHU6 1098 aaKnown RBP29.33■■■□□ 2.29
CTSA-203ENST00000372459 PRDX5P30044 214 aa29.33■■■□□ 2.29
CTSA-203ENST00000372459 DYNLL1P63167 89 aaKnown RBP29.33■■■□□ 2.29
CTSA-203ENST00000372459 WDR66Q8TBY9 1149 aa29.33■■■□□ 2.29
CTSA-203ENST00000372459 GGA1Q9UJY5 639 aa29.33■■■□□ 2.29
CTSA-203ENST00000372459 HPS5Q9UPZ3 1129 aa29.33■■■□□ 2.29
CTSA-203ENST00000372459 FIBPO43427 364 aa29.32■■■□□ 2.28
CTSA-203ENST00000372459 PPARAQ07869 468 aa29.32■■■□□ 2.28
CTSA-203ENST00000372459 ZSCAN23Q3MJ62 389 aa29.32■■■□□ 2.28
CTSA-203ENST00000372459 TMC4Q7Z404 712 aa29.32■■■□□ 2.28
CTSA-203ENST00000372459 NKX2-3Q8TAU0 364 aa29.32■■■□□ 2.28
CTSA-203ENST00000372459 BRIP1Q9BX63 1249 aa29.32■■■□□ 2.28
CTSA-203ENST00000372459 CCDC88AQ3V6T2 1871 aa29.32■■■□□ 2.28
CTSA-203ENST00000372459 UFL1O94874 794 aa29.32■■■□□ 2.28
CTSA-203ENST00000372459 KRT85P78386 507 aa29.32■■■□□ 2.28
CTSA-203ENST00000372459 INCENPQ9NQS7 918 aa29.32■■■□□ 2.28
CTSA-203ENST00000372459 ANAPC4Q9UJX5 808 aa29.32■■■□□ 2.28
CTSA-203ENST00000372459 KDM4AO75164 1064 aa29.31■■■□□ 2.28
CTSA-203ENST00000372459 GADD45BO75293 160 aaPredicted RBP29.31■■■□□ 2.28
CTSA-203ENST00000372459 ZNF445P59923 1031 aa29.31■■■□□ 2.28
CTSA-203ENST00000372459 GIMAP6Q6P9H5 292 aa29.31■■■□□ 2.28
CTSA-203ENST00000372459 IGDCC4Q8TDY8 1250 aa29.31■■■□□ 2.28
CTSA-203ENST00000372459 PODXL2Q9NZ53 605 aa29.31■■■□□ 2.28
CTSA-203ENST00000372459 ZSWIM5Q9P217 1185 aa29.31■■■□□ 2.28
CTSA-203ENST00000372459 TNS1Q9HBL0 1735 aaKnown RBP29.3■■■□□ 2.28
CTSA-203ENST00000372459 RBM27Q9P2N5 1060 aaKnown RBP29.3■■■□□ 2.28
CTSA-203ENST00000372459 NRXN2Q9P2S2 1712 aa29.3■■■□□ 2.28
CTSA-203ENST00000372459 TACC3Q9Y6A5 838 aa29.3■■■□□ 2.28
CTSA-203ENST00000372459 UBE2HP62256 183 aa29.3■■■□□ 2.28
CTSA-203ENST00000372459 DZIP1Q86YF9 867 aaKnown RBP29.3■■■□□ 2.28
CTSA-203ENST00000372459 ZSCAN16Q9H4T2 348 aaPredicted RBP29.3■■■□□ 2.28
CTSA-203ENST00000372459 TMEM67Q5HYA8 995 aa29.29■■■□□ 2.28
CTSA-203ENST00000372459 SYAP1Q96A49 352 aaPredicted RBP29.29■■■□□ 2.28
CTSA-203ENST00000372459 TMEM63CQ9P1W3 806 aa29.29■■■□□ 2.28
CTSA-203ENST00000372459 JAG2Q9Y219 1238 aa29.29■■■□□ 2.28
CTSA-203ENST00000372459 RGPD3A6NKT7 1758 aaPredicted RBP29.28■■■□□ 2.28
CTSA-203ENST00000372459 RGPD4Q7Z3J3 1758 aa29.28■■■□□ 2.28
CTSA-203ENST00000372459 MINDY4BA8MYZ0 360 aa29.28■■■□□ 2.28
CTSA-203ENST00000372459 CPLX1O14810 134 aa29.28■■■□□ 2.28
CTSA-203ENST00000372459 LIFRP42702 1097 aa29.28■■■□□ 2.28
CTSA-203ENST00000372459 SGMS1Q86VZ5 419 aa29.28■■■□□ 2.28
CTSA-203ENST00000372459 MTA3Q9BTC8 594 aa29.28■■■□□ 2.28
CTSA-203ENST00000372459 LY9Q9HBG7 655 aa29.28■■■□□ 2.28
CTSA-203ENST00000372459 TOMM22Q9NS69 142 aa29.28■■■□□ 2.28
CTSA-203ENST00000372459 GAS2L3Q86XJ1 694 aa29.28■■■□□ 2.28
CTSA-203ENST00000372459 CRNKL1Q9BZJ0 848 aaKnown RBP29.28■■■□□ 2.28
CTSA-203ENST00000372459 AATFQ9NY61 560 aaKnown RBP eCLIP29.28■■■□□ 2.28
CTSA-203ENST00000372459 ANKRD31Q8N7Z5 1873 aa29.27■■■□□ 2.28
CTSA-203ENST00000372459 IFIT3O14879 490 aaKnown RBP29.27■■■□□ 2.28
CTSA-203ENST00000372459 LDHBP07195 334 aaKnown RBP29.27■■■□□ 2.28
CTSA-203ENST00000372459 RESTQ13127 1097 aa29.27■■■□□ 2.28
CTSA-203ENST00000372459 RRP12Q5JTH9 1297 aaKnown RBP29.27■■■□□ 2.28
CTSA-203ENST00000372459 NFXL1Q6ZNB6 911 aa29.27■■■□□ 2.28
CTSA-203ENST00000372459 GPR101Q96P66 508 aaPredicted RBP29.27■■■□□ 2.28
CTSA-203ENST00000372459 METAP2P50579 478 aaKnown RBP eCLIP29.26■■■□□ 2.28
CTSA-203ENST00000372459 SART3Q15020 963 aaKnown RBP29.26■■■□□ 2.28
CTSA-203ENST00000372459 APOA5Q6Q788 366 aa29.26■■■□□ 2.28
CTSA-203ENST00000372459 GRPEL1Q9HAV7 217 aa29.26■■■□□ 2.28
CTSA-203ENST00000372459 PPEF1O14829 653 aaPredicted RBP29.26■■■□□ 2.27
CTSA-203ENST00000372459 CD209Q9NNX6 404 aa29.26■■■□□ 2.27
CTSA-203ENST00000372459 PARP3Q9Y6F1 533 aa29.26■■■□□ 2.27
CTSA-203ENST00000372459 KIAA1551Q9HCM1 1747 aa29.25■■■□□ 2.27
CTSA-203ENST00000372459 FDPSP14324 419 aaKnown RBP29.25■■■□□ 2.27
CTSA-203ENST00000372459 RAB11FIP4Q86YS3 637 aa29.25■■■□□ 2.27
CTSA-203ENST00000372459 SP8Q8IXZ3 490 aa29.25■■■□□ 2.27
CTSA-203ENST00000372459 LRRC37AA6NMS7 1700 aa29.25■■■□□ 2.27
CTSA-203ENST00000372459 FAM173BQ6P4H8 233 aa29.24■■■□□ 2.27
CTSA-203ENST00000372459 TBC1D16Q8TBP0 767 aa29.24■■■□□ 2.27
CTSA-203ENST00000372459 SCAND2PQ9GZW5 306 aaPredicted RBP29.24■■■□□ 2.27
CTSA-203ENST00000372459 ATP8A2Q9NTI2 1148 aa29.24■■■□□ 2.27
CTSA-203ENST00000372459 ZBTB43O43298 467 aa29.24■■■□□ 2.27
CTSA-203ENST00000372459 MMP10P09238 476 aa29.24■■■□□ 2.27
CTSA-203ENST00000372459 IL1R1P14778 569 aa29.24■■■□□ 2.27
CTSA-203ENST00000372459 GSTO1P78417 241 aa29.24■■■□□ 2.27
CTSA-203ENST00000372459 ELP1O95163 1332 aa29.23■■■□□ 2.27
CTSA-203ENST00000372459 ERICH2A1L162 156 aa29.23■■■□□ 2.27
CTSA-203ENST00000372459 CCDC69A6NI79 296 aa29.23■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms