RNA–Protein interactions for RNA: ENST00000372417.1

YIPF3-201, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 406 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-201ENST00000372417 LRRC26Q2I0M4 334 aa10.25□□□□□ -0.77
YIPF3-201ENST00000372417 ATXN2LQ8WWM7 1075 aaKnown RBP10.25□□□□□ -0.77
YIPF3-201ENST00000372417 JARID2Q92833 1246 aaPredicted RBP10.25□□□□□ -0.77
YIPF3-201ENST00000372417 COA7Q96BR5 231 aa10.25□□□□□ -0.77
YIPF3-201ENST00000372417 HOOK2Q96ED9 719 aa10.25□□□□□ -0.77
YIPF3-201ENST00000372417 BABAM1Q9NWV8 329 aa10.25□□□□□ -0.77
YIPF3-201ENST00000372417 KCNH4Q9UQ05 1017 aa10.25□□□□□ -0.77
YIPF3-201ENST00000372417 REV3LO60673 3130 aa10.25□□□□□ -0.77
YIPF3-201ENST00000372417 DOCK1Q14185 1865 aa10.25□□□□□ -0.77
YIPF3-201ENST00000372417 IGHMBP2P38935 993 aaKnown RBP10.24□□□□□ -0.77
YIPF3-201ENST00000372417 SMAD3P84022 425 aaKnown RBP10.24□□□□□ -0.77
YIPF3-201ENST00000372417 MOGSQ13724 837 aa10.24□□□□□ -0.77
YIPF3-201ENST00000372417 HDGFL1Q5TGJ6 251 aa10.24□□□□□ -0.77
YIPF3-201ENST00000372417 RIC3Q7Z5B4 369 aa10.24□□□□□ -0.77
YIPF3-201ENST00000372417 ALYREFQ86V81 257 aaKnown RBP10.24□□□□□ -0.77
YIPF3-201ENST00000372417 CCDC191Q8NCU4 936 aa10.24□□□□□ -0.77
YIPF3-201ENST00000372417 IL27Q8NEV9 243 aa10.24□□□□□ -0.77
YIPF3-201ENST00000372417 THEGQ9P2T0 379 aa10.24□□□□□ -0.77
YIPF3-201ENST00000372417 DBF4Q9UBU7 674 aaPredicted RBP10.24□□□□□ -0.77
YIPF3-201ENST00000372417 SERPINA10Q9UK55 444 aa10.24□□□□□ -0.77
YIPF3-201ENST00000372417 JAG2Q9Y219 1238 aa10.24□□□□□ -0.77
YIPF3-201ENST00000372417 COL6A1P12109 1028 aa10.23□□□□□ -0.77
YIPF3-201ENST00000372417 GOLGA2Q08379 1002 aa10.23□□□□□ -0.77
YIPF3-201ENST00000372417 DCAF15Q66K64 600 aa10.23□□□□□ -0.77
YIPF3-201ENST00000372417 ZNF804AQ7Z570 1209 aa10.23□□□□□ -0.77
YIPF3-201ENST00000372417 DZIP1LQ8IYY4 767 aaKnown RBP10.23□□□□□ -0.77
YIPF3-201ENST00000372417 ASB2Q96Q27 587 aa10.23□□□□□ -0.77
YIPF3-201ENST00000372417 MYD88Q99836 296 aa10.23□□□□□ -0.77
YIPF3-201ENST00000372417 GREM2Q9H772 168 aa10.23□□□□□ -0.77
YIPF3-201ENST00000372417 HYPKQ9NX55 129 aa10.23□□□□□ -0.77
YIPF3-201ENST00000372417 CWC25Q9NXE8 425 aaPredicted RBP10.23□□□□□ -0.77
YIPF3-201ENST00000372417 TIMELESSQ9UNS1 1208 aa10.23□□□□□ -0.77
YIPF3-201ENST00000372417 GBF1Q92538 1859 aa10.23□□□□□ -0.77
YIPF3-201ENST00000372417 ATAD5Q96QE3 1844 aa10.22□□□□□ -0.77
YIPF3-201ENST00000372417 IL1R1P14778 569 aa10.22□□□□□ -0.77
YIPF3-201ENST00000372417 SHHQ15465 462 aa10.22□□□□□ -0.77
YIPF3-201ENST00000372417 GPAT2Q6NUI2 795 aa10.22□□□□□ -0.77
YIPF3-201ENST00000372417 TTLL11Q8NHH1 800 aa10.22□□□□□ -0.77
YIPF3-201ENST00000372417 ZNF341Q9BYN7 854 aa10.22□□□□□ -0.77
YIPF3-201ENST00000372417 PRKAG2Q9UGJ0 569 aa10.22□□□□□ -0.77
YIPF3-201ENST00000372417 TTF2Q9UNY4 1162 aaKnown RBP10.22□□□□□ -0.77
YIPF3-201ENST00000372417 LOC285556D6RIA3 1793 aa10.21□□□□□ -0.77
YIPF3-201ENST00000372417 INPP5BP32019 993 aa10.21□□□□□ -0.77
YIPF3-201ENST00000372417 MRPS5P82675 430 aaKnown RBP10.21□□□□□ -0.77
YIPF3-201ENST00000372417 TRIM32Q13049 653 aa10.21□□□□□ -0.77
YIPF3-201ENST00000372417 KRT24Q2M2I5 525 aa10.21□□□□□ -0.77
YIPF3-201ENST00000372417 C9orf50Q5SZB4 431 aa10.21□□□□□ -0.77
YIPF3-201ENST00000372417 PLEKHF1Q96S99 279 aa10.21□□□□□ -0.77
YIPF3-201ENST00000372417 MPHOSPH8Q99549 860 aa10.21□□□□□ -0.77
YIPF3-201ENST00000372417 LRFN3Q9BTN0 628 aa10.21□□□□□ -0.77
YIPF3-201ENST00000372417 MAPK8IP3Q9UPT6 1336 aa10.21□□□□□ -0.78
YIPF3-201ENST00000372417 RPAP1Q9BWH6 1393 aaPredicted RBP10.21□□□□□ -0.78
YIPF3-201ENST00000372417 CRKP46108 304 aa10.2□□□□□ -0.78
YIPF3-201ENST00000372417 C15orf52Q6ZUT6 534 aaKnown RBP10.2□□□□□ -0.78
YIPF3-201ENST00000372417 SMCR8Q8TEV9 937 aaPredicted RBP10.2□□□□□ -0.78
YIPF3-201ENST00000372417 PPM1EQ8WY54 764 aa10.2□□□□□ -0.78
YIPF3-201ENST00000372417 XIRP2A4UGR9 3374 aa10.2□□□□□ -0.78
YIPF3-201ENST00000372417 CXCL11O14625 94 aa10.19□□□□□ -0.78
YIPF3-201ENST00000372417 CACNB3P54284 484 aa10.19□□□□□ -0.78
YIPF3-201ENST00000372417 CHRNDQ07001 517 aa10.19□□□□□ -0.78
YIPF3-201ENST00000372417 GRIN2CQ14957 1233 aa10.19□□□□□ -0.78
YIPF3-201ENST00000372417 MFSD14BQ5SR56 506 aa10.19□□□□□ -0.78
YIPF3-201ENST00000372417 FASTKD5Q7L8L6 764 aaKnown RBP10.19□□□□□ -0.78
YIPF3-201ENST00000372417 FAM83AQ86UY5 434 aa10.19□□□□□ -0.78
YIPF3-201ENST00000372417 TMOD2Q9NZR1 351 aa10.19□□□□□ -0.78
YIPF3-201ENST00000372417 SLC45A1Q9Y2W3 748 aa10.19□□□□□ -0.78
YIPF3-201ENST00000372417 SNAP23O00161 211 aa10.18□□□□□ -0.78
YIPF3-201ENST00000372417 HOXB7P09629 217 aa10.18□□□□□ -0.78
YIPF3-201ENST00000372417 PRKAR2AP13861 404 aaKnown RBP10.18□□□□□ -0.78
YIPF3-201ENST00000372417 PPP2R1AP30153 589 aa10.18□□□□□ -0.78
YIPF3-201ENST00000372417 GADL1Q6ZQY3 521 aa10.18□□□□□ -0.78
YIPF3-201ENST00000372417 MIGA2Q7L4E1 593 aa10.18□□□□□ -0.78
YIPF3-201ENST00000372417 ANKRD13CQ8N6S4 541 aa10.18□□□□□ -0.78
YIPF3-201ENST00000372417 P2RX7Q99572 595 aaKnown RBP10.18□□□□□ -0.78
YIPF3-201ENST00000372417 LRRC37A2A6NM11 1700 aa10.18□□□□□ -0.78
YIPF3-201ENST00000372417 CHD9Q3L8U1 2897 aa10.18□□□□□ -0.78
YIPF3-201ENST00000372417 A0A0G2JLL6 359 aaPredicted RBP10.17□□□□□ -0.78
YIPF3-201ENST00000372417 TAF5LO75529 589 aa10.17□□□□□ -0.78
YIPF3-201ENST00000372417 ITGA6P23229 1130 aa10.17□□□□□ -0.78
YIPF3-201ENST00000372417 FAM110CQ1W6H9 321 aa10.17□□□□□ -0.78
YIPF3-201ENST00000372417 TMEM31Q5JXX7 168 aa10.17□□□□□ -0.78
YIPF3-201ENST00000372417 NOL9Q5SY16 702 aaKnown RBP10.17□□□□□ -0.78
YIPF3-201ENST00000372417 MAP3K21Q5TCX8 1036 aa10.17□□□□□ -0.78
YIPF3-201ENST00000372417 PRRT2Q7Z6L0 340 aaPredicted RBP10.17□□□□□ -0.78
YIPF3-201ENST00000372417 TRIB2Q92519 343 aa10.17□□□□□ -0.78
YIPF3-201ENST00000372417 NECAB3Q96P71 396 aaPredicted RBP10.17□□□□□ -0.78
YIPF3-201ENST00000372417 GAS2L1Q99501 681 aaPredicted RBP10.17□□□□□ -0.78
YIPF3-201ENST00000372417 ZNF112Q9UJU3 913 aa10.17□□□□□ -0.78
YIPF3-201ENST00000372417 MRE11P49959 708 aa10.16□□□□□ -0.78
YIPF3-201ENST00000372417 PDE3AQ14432 1141 aa10.16□□□□□ -0.78
YIPF3-201ENST00000372417 FKBP1CQ5VVH2 108 aa10.16□□□□□ -0.78
YIPF3-201ENST00000372417 METTL22Q9BUU2 404 aaPredicted RBP10.16□□□□□ -0.78
YIPF3-201ENST00000372417 SENP6Q9GZR1 1112 aaPredicted RBP10.16□□□□□ -0.78
YIPF3-201ENST00000372417 PNNQ9H307 717 aaKnown RBP10.16□□□□□ -0.78
YIPF3-201ENST00000372417 DNAJB2P25686 324 aa10.15□□□□□ -0.78
YIPF3-201ENST00000372417 ATN1P54259 1190 aaPredicted RBP10.15□□□□□ -0.78
YIPF3-201ENST00000372417 RIPK4P57078 832 aa10.15□□□□□ -0.78
YIPF3-201ENST00000372417 RTP1P59025 263 aa10.15□□□□□ -0.78
YIPF3-201ENST00000372417 LMOD3Q0VAK6 560 aa10.15□□□□□ -0.78
YIPF3-201ENST00000372417 AKNAD1Q5T1N1 836 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms