RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 HPS5Q9UPZ3 1129 aa12.64□□□□□ -0.39
COL5A1-202ENST00000371820 PA2G4Q9UQ80 394 aaKnown RBP12.64□□□□□ -0.39
COL5A1-202ENST00000371820 PDE4DIPQ5VU43 2346 aa12.63□□□□□ -0.39
COL5A1-202ENST00000371820 ZBTB48P10074 688 aaPredicted RBP12.63□□□□□ -0.39
COL5A1-202ENST00000371820 G3BP1Q13283 466 aaKnown RBP eCLIP12.63□□□□□ -0.39
COL5A1-202ENST00000371820 SPDYE2Q495Y8 402 aa12.63□□□□□ -0.39
COL5A1-202ENST00000371820 ITPRIPQ8IWB1 547 aa12.63□□□□□ -0.39
COL5A1-202ENST00000371820 MRIQ9BWK5 157 aa12.63□□□□□ -0.39
COL5A1-202ENST00000371820 TNNQ9UQP3 1299 aa12.63□□□□□ -0.39
COL5A1-202ENST00000371820 OTOFQ9HC10 1997 aa12.63□□□□□ -0.39
COL5A1-202ENST00000371820 MANSC4A6NHS7 340 aaPredicted RBP12.62□□□□□ -0.39
COL5A1-202ENST00000371820 UNCXA6NJT0 531 aa12.62□□□□□ -0.39
COL5A1-202ENST00000371820 ALDH1A1P00352 501 aa12.62□□□□□ -0.39
COL5A1-202ENST00000371820 PTMSP20962 102 aa12.62□□□□□ -0.39
COL5A1-202ENST00000371820 WNK4Q96J92 1243 aa12.62□□□□□ -0.39
COL5A1-202ENST00000371820 CLMNQ96JQ2 1002 aa12.62□□□□□ -0.39
COL5A1-202ENST00000371820 R3HDMLQ9H3Y0 253 aa12.62□□□□□ -0.39
COL5A1-202ENST00000371820 ZNF70Q9UC06 446 aaPredicted RBP12.62□□□□□ -0.39
COL5A1-202ENST00000371820 SALL1Q9NSC2 1324 aa12.62□□□□□ -0.39
COL5A1-202ENST00000371820 A0A1B0GUL7 405 aa12.61□□□□□ -0.39
COL5A1-202ENST00000371820 FKTNO75072 461 aa12.61□□□□□ -0.39
COL5A1-202ENST00000371820 RASA3Q14644 834 aa12.61□□□□□ -0.39
COL5A1-202ENST00000371820 NBPF12Q5TAG4 269 aaPredicted RBP12.61□□□□□ -0.39
COL5A1-202ENST00000371820 FBXO46Q6PJ61 603 aaPredicted RBP12.61□□□□□ -0.39
COL5A1-202ENST00000371820 HHIPL2Q6UWX4 724 aa12.61□□□□□ -0.39
COL5A1-202ENST00000371820 IFNL1Q8IU54 200 aa12.61□□□□□ -0.39
COL5A1-202ENST00000371820 GCC1Q96CN9 775 aa12.61□□□□□ -0.39
COL5A1-202ENST00000371820 SLC10A4Q96EP9 437 aa12.61□□□□□ -0.39
COL5A1-202ENST00000371820 ZDHHC15Q96MV8 337 aa12.61□□□□□ -0.39
COL5A1-202ENST00000371820 TDRD3Q9H7E2 651 aaKnown RBP12.61□□□□□ -0.39
COL5A1-202ENST00000371820 PDS5AQ29RF7 1337 aaKnown RBP12.61□□□□□ -0.39
COL5A1-202ENST00000371820 LDHBP07195 334 aaKnown RBP12.6□□□□□ -0.39
COL5A1-202ENST00000371820 IREB2P48200 963 aaKnown RBP12.6□□□□□ -0.39
COL5A1-202ENST00000371820 INHBEP58166 350 aa12.6□□□□□ -0.39
COL5A1-202ENST00000371820 OS9Q13438 667 aaPredicted RBP12.6□□□□□ -0.39
COL5A1-202ENST00000371820 GORABQ5T7V8 394 aa12.6□□□□□ -0.39
COL5A1-202ENST00000371820 CCDC102BQ68D86 513 aa12.6□□□□□ -0.39
COL5A1-202ENST00000371820 SLF2Q8IX21 1173 aa12.6□□□□□ -0.39
COL5A1-202ENST00000371820 SMC5Q8IY18 1101 aa12.6□□□□□ -0.39
COL5A1-202ENST00000371820 HOOK2Q96ED9 719 aa12.6□□□□□ -0.39
COL5A1-202ENST00000371820 TBC1D32Q96NH3 1257 aa12.6□□□□□ -0.39
COL5A1-202ENST00000371820 PCDHB15Q9Y5E8 787 aa12.6□□□□□ -0.39
COL5A1-202ENST00000371820 PNMA6EA0A0J9YXQ4 647 aa12.59□□□□□ -0.39
COL5A1-202ENST00000371820 IGF2BP3O00425 579 aaKnown RBP eCLIP12.59□□□□□ -0.39
COL5A1-202ENST00000371820 USP2O75604 605 aaPredicted RBP12.59□□□□□ -0.39
COL5A1-202ENST00000371820 GJA5P36382 358 aa12.59□□□□□ -0.39
COL5A1-202ENST00000371820 PHKA1P46020 1223 aa12.59□□□□□ -0.39
COL5A1-202ENST00000371820 ATP8B2P98198 1209 aa12.59□□□□□ -0.39
COL5A1-202ENST00000371820 TFCP2Q12800 502 aa12.59□□□□□ -0.39
COL5A1-202ENST00000371820 L1TD1Q5T7N2 865 aaKnown RBP12.59□□□□□ -0.39
COL5A1-202ENST00000371820 FKBP1CQ5VVH2 108 aa12.59□□□□□ -0.39
COL5A1-202ENST00000371820 SPTY2D1Q68D10 685 aaPredicted RBP12.59□□□□□ -0.39
COL5A1-202ENST00000371820 ANKRD13AQ8IZ07 590 aa12.59□□□□□ -0.39
COL5A1-202ENST00000371820 XAGE2Q96GT9 111 aa12.59□□□□□ -0.39
COL5A1-202ENST00000371820 NEUROD6Q96NK8 337 aa12.59□□□□□ -0.39
COL5A1-202ENST00000371820 TCP10L2B9ZVM9 353 aa12.58□□□□□ -0.4
COL5A1-202ENST00000371820 ZBTB7BO15156 539 aaPredicted RBP12.58□□□□□ -0.4
COL5A1-202ENST00000371820 TIMM10P62072 90 aa12.58□□□□□ -0.4
COL5A1-202ENST00000371820 POLA2Q14181 598 aa12.58□□□□□ -0.4
COL5A1-202ENST00000371820 GRIK5Q16478 980 aa12.58□□□□□ -0.4
COL5A1-202ENST00000371820 FAM83AQ86UY5 434 aa12.58□□□□□ -0.4
COL5A1-202ENST00000371820 SSH3Q8TE77 659 aa12.58□□□□□ -0.4
COL5A1-202ENST00000371820 TEPSINQ96N21 525 aa12.58□□□□□ -0.4
COL5A1-202ENST00000371820 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.58□□□□□ -0.4
COL5A1-202ENST00000371820 UQCRFS1P1P0C7P4 283 aa12.57□□□□□ -0.4
COL5A1-202ENST00000371820 ADORA1P30542 326 aa12.57□□□□□ -0.4
COL5A1-202ENST00000371820 DZIP1Q86YF9 867 aaKnown RBP12.57□□□□□ -0.4
COL5A1-202ENST00000371820 CDAN1Q8IWY9 1227 aa12.57□□□□□ -0.4
COL5A1-202ENST00000371820 GPR108Q9NPR9 543 aa12.57□□□□□ -0.4
COL5A1-202ENST00000371820 HTTP42858 3142 aa12.57□□□□□ -0.4
COL5A1-202ENST00000371820 RPAP1Q9BWH6 1393 aaPredicted RBP12.56□□□□□ -0.4
COL5A1-202ENST00000371820 TESPA1A2RU30 521 aaPredicted RBP12.56□□□□□ -0.4
COL5A1-202ENST00000371820 SURF6O75683 361 aaKnown RBP12.56□□□□□ -0.4
COL5A1-202ENST00000371820 RLBP1P12271 317 aa12.56□□□□□ -0.4
COL5A1-202ENST00000371820 PRDX5P30044 214 aa12.56□□□□□ -0.4
COL5A1-202ENST00000371820 APOBEC3HQ6NTF7 200 aaKnown RBP12.56□□□□□ -0.4
COL5A1-202ENST00000371820 ELP3Q9H9T3 547 aa12.56□□□□□ -0.4
COL5A1-202ENST00000371820 ZBTB40Q9NUA8 1239 aa12.56□□□□□ -0.4
COL5A1-202ENST00000371820 ABCF2Q9UG63 623 aa12.56□□□□□ -0.4
COL5A1-202ENST00000371820 CRHR2Q13324 411 aa12.55□□□□□ -0.4
COL5A1-202ENST00000371820 RASGRF1Q13972 1273 aa12.55□□□□□ -0.4
COL5A1-202ENST00000371820 HSP90AB4PQ58FF6 505 aa12.55□□□□□ -0.4
COL5A1-202ENST00000371820 CCDC158Q5M9N0 1113 aa12.55□□□□□ -0.4
COL5A1-202ENST00000371820 PRPF38BQ5VTL8 546 aaKnown RBP12.55□□□□□ -0.4
COL5A1-202ENST00000371820 DCAF15Q66K64 600 aa12.55□□□□□ -0.4
COL5A1-202ENST00000371820 OTUD7BQ6GQQ9 843 aa12.55□□□□□ -0.4
COL5A1-202ENST00000371820 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.55□□□□□ -0.4
COL5A1-202ENST00000371820 OTOP1Q7RTM1 612 aa12.55□□□□□ -0.4
COL5A1-202ENST00000371820 ERC1Q8IUD2 1116 aa12.55□□□□□ -0.4
COL5A1-202ENST00000371820 IL27Q8NEV9 243 aa12.55□□□□□ -0.4
COL5A1-202ENST00000371820 OPTNQ96CV9 577 aa12.55□□□□□ -0.4
COL5A1-202ENST00000371820 PTPN18Q99952 460 aa12.55□□□□□ -0.4
COL5A1-202ENST00000371820 TMEM39BQ9GZU3 492 aa12.55□□□□□ -0.4
COL5A1-202ENST00000371820 C1orf115Q9H7X2 142 aa12.55□□□□□ -0.4
COL5A1-202ENST00000371820 DAGLAQ9Y4D2 1042 aa12.55□□□□□ -0.4
COL5A1-202ENST00000371820 TRIM17Q9Y577 477 aa12.55□□□□□ -0.4
COL5A1-202ENST00000371820 IGSF3O75054 1194 aa12.54□□□□□ -0.4
COL5A1-202ENST00000371820 HMMRO75330 724 aa12.54□□□□□ -0.4
COL5A1-202ENST00000371820 LDHCP07864 332 aa12.54□□□□□ -0.4
COL5A1-202ENST00000371820 ARID4AP29374 1257 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms