RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 CD163L1Q9NR16 1453 aa10.42□□□□□ -0.74
SMARCA1-202ENST00000371122 NR1I2O75469 434 aa10.42□□□□□ -0.74
SMARCA1-202ENST00000371122 BRD1O95696 1058 aa10.42□□□□□ -0.74
SMARCA1-202ENST00000371122 TTC6Q86TZ1 520 aa10.42□□□□□ -0.74
SMARCA1-202ENST00000371122 FAM107BQ9H098 131 aa10.42□□□□□ -0.74
SMARCA1-202ENST00000371122 CBX8Q9HC52 389 aa10.42□□□□□ -0.74
SMARCA1-202ENST00000371122 TCP11L1Q9NUJ3 509 aa10.42□□□□□ -0.74
SMARCA1-202ENST00000371122 ZFYP08048 801 aaPredicted RBP10.41□□□□□ -0.74
SMARCA1-202ENST00000371122 RAD51AP2Q09MP3 1159 aa10.41□□□□□ -0.74
SMARCA1-202ENST00000371122 PRPF4BQ13523 1007 aaKnown RBP10.41□□□□□ -0.74
SMARCA1-202ENST00000371122 FAM98CQ17RN3 349 aaKnown RBP10.41□□□□□ -0.74
SMARCA1-202ENST00000371122 SYNE4Q8N205 404 aa10.41□□□□□ -0.74
SMARCA1-202ENST00000371122 KCNG4Q8TDN1 519 aa10.41□□□□□ -0.74
SMARCA1-202ENST00000371122 SDR42E1Q8WUS8 393 aa10.41□□□□□ -0.74
SMARCA1-202ENST00000371122 HINFPQ9BQA5 517 aa10.41□□□□□ -0.74
SMARCA1-202ENST00000371122 CCDC113Q9H0I3 377 aa10.41□□□□□ -0.74
SMARCA1-202ENST00000371122 JADE2Q9NQC1 790 aa10.41□□□□□ -0.74
SMARCA1-202ENST00000371122 AATFQ9NY61 560 aaKnown RBP eCLIP10.41□□□□□ -0.74
SMARCA1-202ENST00000371122 DBNLQ9UJU6 430 aaKnown RBP10.41□□□□□ -0.74
SMARCA1-202ENST00000371122 TRIM75PA6NK02 468 aa10.41□□□□□ -0.74
SMARCA1-202ENST00000371122 ZSCAN12O43309 604 aa10.41□□□□□ -0.74
SMARCA1-202ENST00000371122 TRIM21P19474 475 aaKnown RBP10.41□□□□□ -0.74
SMARCA1-202ENST00000371122 U2AF2P26368 475 aaKnown RBP eCLIP10.41□□□□□ -0.745e-7■■■□□ 15.5
SMARCA1-202ENST00000371122 TERF1P54274 439 aa10.41□□□□□ -0.74
SMARCA1-202ENST00000371122 SPA17Q15506 151 aa10.41□□□□□ -0.74
SMARCA1-202ENST00000371122 FAM47AQ5JRC9 791 aa10.41□□□□□ -0.74
SMARCA1-202ENST00000371122 LEKR1Q6ZMV7 388 aa10.41□□□□□ -0.74
SMARCA1-202ENST00000371122 TNNI2P48788 182 aa10.41□□□□□ -0.74
SMARCA1-202ENST00000371122 CCDC40Q4G0X9 1142 aa10.41□□□□□ -0.74
SMARCA1-202ENST00000371122 CAPZA3Q96KX2 299 aa10.41□□□□□ -0.74
SMARCA1-202ENST00000371122 USP28Q96RU2 1077 aa10.41□□□□□ -0.74
SMARCA1-202ENST00000371122 CRNKL1Q9BZJ0 848 aaKnown RBP10.41□□□□□ -0.74
SMARCA1-202ENST00000371122 ROBO1Q9Y6N7 1651 aa10.41□□□□□ -0.74
SMARCA1-202ENST00000371122 ABCA3Q99758 1704 aa10.4□□□□□ -0.74
SMARCA1-202ENST00000371122 NOP2P46087 812 aaKnown RBP10.4□□□□□ -0.74
SMARCA1-202ENST00000371122 AKNAD1Q5T1N1 836 aa10.4□□□□□ -0.74
SMARCA1-202ENST00000371122 JAKMIP3Q5VZ66 844 aa10.4□□□□□ -0.74
SMARCA1-202ENST00000371122 BCCIPQ9P287 314 aaKnown RBP eCLIP10.4□□□□□ -0.74
SMARCA1-202ENST00000371122 SAMM50Q9Y512 469 aa10.4□□□□□ -0.74
SMARCA1-202ENST00000371122 ZNF532Q9HCE3 1301 aa10.4□□□□□ -0.74
SMARCA1-202ENST00000371122 ANKRD26Q9UPS8 1709 aa10.4□□□□□ -0.74
SMARCA1-202ENST00000371122 TMCO5BA8MYB1 307 aa10.4□□□□□ -0.74
SMARCA1-202ENST00000371122 POLR2DO15514 142 aaKnown RBP10.4□□□□□ -0.74
SMARCA1-202ENST00000371122 STAT6P42226 847 aa10.4□□□□□ -0.74
SMARCA1-202ENST00000371122 GYG1P46976 350 aa10.4□□□□□ -0.74
SMARCA1-202ENST00000371122 ASIC1P78348 528 aa10.4□□□□□ -0.74
SMARCA1-202ENST00000371122 PLS1Q14651 629 aa10.4□□□□□ -0.74
SMARCA1-202ENST00000371122 FEZ1Q99689 392 aa10.4□□□□□ -0.74
SMARCA1-202ENST00000371122 VPS16Q9H269 839 aa10.4□□□□□ -0.74
SMARCA1-202ENST00000371122 PKD2L1Q9P0L9 805 aa10.4□□□□□ -0.74
SMARCA1-202ENST00000371122 TMEM94Q12767 1356 aa10.4□□□□□ -0.74
SMARCA1-202ENST00000371122 MED1Q15648 1581 aaPredicted RBP10.4□□□□□ -0.74
SMARCA1-202ENST00000371122 E7EWF7 191 aa10.4□□□□□ -0.75
SMARCA1-202ENST00000371122 AKR1B10O60218 316 aa10.4□□□□□ -0.75
SMARCA1-202ENST00000371122 NAPAP54920 295 aa10.4□□□□□ -0.75
SMARCA1-202ENST00000371122 UVSSAQ2YD98 709 aa10.4□□□□□ -0.75
SMARCA1-202ENST00000371122 DIS3L2Q8IYB7 885 aaKnown RBP10.4□□□□□ -0.75
SMARCA1-202ENST00000371122 PLEKHA4Q9H4M7 779 aa10.4□□□□□ -0.75
SMARCA1-202ENST00000371122 COL16A1Q07092 1604 aaPredicted RBP10.4□□□□□ -0.75
SMARCA1-202ENST00000371122 MYCNP04198 464 aaPredicted RBP10.39□□□□□ -0.75
SMARCA1-202ENST00000371122 SP4Q02446 784 aa10.39□□□□□ -0.75
SMARCA1-202ENST00000371122 SSH2Q76I76 1423 aa10.39□□□□□ -0.75
SMARCA1-202ENST00000371122 BAG3O95817 575 aa10.39□□□□□ -0.75
SMARCA1-202ENST00000371122 NEFHP12036 1026 aa10.39□□□□□ -0.75
SMARCA1-202ENST00000371122 BCAMP50895 628 aa10.39□□□□□ -0.75
SMARCA1-202ENST00000371122 TMOD2Q9NZR1 351 aa10.39□□□□□ -0.75
SMARCA1-202ENST00000371122 VPS54Q9P1Q0 977 aa10.39□□□□□ -0.75
SMARCA1-202ENST00000371122 NRBP1Q9UHY1 535 aa10.39□□□□□ -0.75
SMARCA1-202ENST00000371122 MTMR6Q9Y217 621 aa10.39□□□□□ -0.75
SMARCA1-202ENST00000371122 RNASE9P60153 205 aaKnown RBP10.39□□□□□ -0.75
SMARCA1-202ENST00000371122 LETM2Q2VYF4 491 aa10.39□□□□□ -0.75
SMARCA1-202ENST00000371122 FNBP4Q8N3X1 1017 aaPredicted RBP10.39□□□□□ -0.75
SMARCA1-202ENST00000371122 CRACR2AQ9BSW2 395 aa10.39□□□□□ -0.75
SMARCA1-202ENST00000371122 KRT23Q9C075 422 aa10.39□□□□□ -0.75
SMARCA1-202ENST00000371122 GUCA1BQ9UMX6 200 aa10.39□□□□□ -0.75
SMARCA1-202ENST00000371122 SH3TC1Q8TE82 1336 aa10.39□□□□□ -0.75
SMARCA1-202ENST00000371122 SHPRHQ149N8 1683 aa10.39□□□□□ -0.75
SMARCA1-202ENST00000371122 ERLIN1O75477 346 aa10.38□□□□□ -0.75
SMARCA1-202ENST00000371122 RHOXF2BP0C7M4 288 aa10.38□□□□□ -0.75
SMARCA1-202ENST00000371122 PDIA4P13667 645 aaKnown RBP10.38□□□□□ -0.75
SMARCA1-202ENST00000371122 HLTFQ14527 1009 aaKnown RBP eCLIP10.38□□□□□ -0.751e-13■□□□□ 9.1
SMARCA1-202ENST00000371122 PIK3AP1Q6ZUJ8 805 aa10.38□□□□□ -0.75
SMARCA1-202ENST00000371122 SMIM5Q71RC9 77 aa10.38□□□□□ -0.75
SMARCA1-202ENST00000371122 PSMB7Q99436 277 aa10.38□□□□□ -0.75
SMARCA1-202ENST00000371122 RHOXF2Q9BQY4 288 aa10.38□□□□□ -0.75
SMARCA1-202ENST00000371122 KIF5BP33176 963 aa10.38□□□□□ -0.75
SMARCA1-202ENST00000371122 ZYXQ15942 572 aaKnown RBP10.38□□□□□ -0.75
SMARCA1-202ENST00000371122 DNAJC21Q5F1R6 531 aaKnown RBP10.38□□□□□ -0.75
SMARCA1-202ENST00000371122 EPHA10Q5JZY3 1008 aa10.38□□□□□ -0.75
SMARCA1-202ENST00000371122 GTF3C6Q969F1 213 aa10.38□□□□□ -0.75
SMARCA1-202ENST00000371122 CLIC6Q96NY7 704 aa10.38□□□□□ -0.75
SMARCA1-202ENST00000371122 RABEP2Q9H5N1 569 aa10.38□□□□□ -0.75
SMARCA1-202ENST00000371122 GPCPD1Q9NPB8 672 aa10.38□□□□□ -0.75
SMARCA1-202ENST00000371122 RIOK3O14730 519 aaKnown RBP10.38□□□□□ -0.75
SMARCA1-202ENST00000371122 PHKG2P15735 406 aa10.38□□□□□ -0.75
SMARCA1-202ENST00000371122 GOLGA8FQ08AF8 430 aa10.38□□□□□ -0.75
SMARCA1-202ENST00000371122 GOLGA8DPQ0D2H9 430 aa10.38□□□□□ -0.75
SMARCA1-202ENST00000371122 AIFM3Q96NN9 605 aa10.38□□□□□ -0.75
SMARCA1-202ENST00000371122 AXIN2Q9Y2T1 843 aa10.38□□□□□ -0.75
SMARCA1-202ENST00000371122 YEATS4O95619 227 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms