RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 CYB5R4Q7L1T6 521 aa14.99□□□□□ -0.01
GPC3-201ENST00000370818 FAM84BQ96KN1 310 aaPredicted RBP14.99□□□□□ -0.01
GPC3-201ENST00000370818 LRP2BPQ9P2M1 347 aa14.99□□□□□ -0.01
GPC3-201ENST00000370818 TFIP11Q9UBB9 837 aaKnown RBP14.99□□□□□ -0.01
GPC3-201ENST00000370818 A0A1B0GUL6 1792 aa14.99□□□□□ -0.01
GPC3-201ENST00000370818 TAF1LQ8IZX4 1826 aa14.99□□□□□ -0.01
GPC3-201ENST00000370818 PNPLA7Q6ZV29 1317 aa14.98□□□□□ -0.01
GPC3-201ENST00000370818 PRKAB2O43741 272 aa14.98□□□□□ -0.01
GPC3-201ENST00000370818 TRDNQ13061 729 aa14.98□□□□□ -0.01
GPC3-201ENST00000370818 NAA16Q6N069 864 aaPredicted RBP14.98□□□□□ -0.01
GPC3-201ENST00000370818 TRPC5Q9UL62 973 aaPredicted RBP14.98□□□□□ -0.01
GPC3-201ENST00000370818 SBF2Q86WG5 1849 aa14.98□□□□□ -0.01
GPC3-201ENST00000370818 EP400Q96L91 3159 aa14.98□□□□□ -0.01
GPC3-201ENST00000370818 NEDD4P46934 1319 aa14.98□□□□□ -0.01
GPC3-201ENST00000370818 PHF14O94880 888 aa14.98□□□□□ -0.01
GPC3-201ENST00000370818 TM4SF1P30408 202 aa14.98□□□□□ -0.01
GPC3-201ENST00000370818 FAM196AQ6ZSG2 479 aa14.98□□□□□ -0.01
GPC3-201ENST00000370818 ADGRA1Q86SQ6 560 aa14.98□□□□□ -0.01
GPC3-201ENST00000370818 IPO4Q8TEX9 1081 aaKnown RBP14.98□□□□□ -0.01
GPC3-201ENST00000370818 INCENPQ9NQS7 918 aa14.98□□□□□ -0.01
GPC3-201ENST00000370818 TACC3Q9Y6A5 838 aa14.98□□□□□ -0.01
GPC3-201ENST00000370818 C4BP0C0L5 1744 aa14.98□□□□□ -0.01
GPC3-201ENST00000370818 GOLGA8BA8MQT2 603 aa14.97□□□□□ -0.01
GPC3-201ENST00000370818 KLRK1P26718 216 aa14.97□□□□□ -0.01
GPC3-201ENST00000370818 MIGA1Q8NAN2 632 aa14.97□□□□□ -0.01
GPC3-201ENST00000370818 SCAND2PQ9GZW5 306 aaPredicted RBP14.97□□□□□ -0.01
GPC3-201ENST00000370818 NAPBQ9H115 298 aa14.97□□□□□ -0.01
GPC3-201ENST00000370818 ZSCAN16Q9H4T2 348 aaPredicted RBP14.97□□□□□ -0.01
GPC3-201ENST00000370818 CARMIL3Q8ND23 1372 aa14.97□□□□□ -0.01
GPC3-201ENST00000370818 B4E1Z4 1266 aa14.97□□□□□ -0.01
GPC3-201ENST00000370818 IGSF3O75054 1194 aa14.97□□□□□ -0.01
GPC3-201ENST00000370818 RFC4P35249 363 aa14.97□□□□□ -0.01
GPC3-201ENST00000370818 TRAPPC3LQ5T215 181 aa14.97□□□□□ -0.01
GPC3-201ENST00000370818 LEO1Q8WVC0 666 aaPredicted RBP14.97□□□□□ -0.01
GPC3-201ENST00000370818 GNL3LQ9NVN8 582 aaKnown RBP14.97□□□□□ -0.01
GPC3-201ENST00000370818 ABCF2Q9UG63 623 aa14.97□□□□□ -0.01
GPC3-201ENST00000370818 FOSBP53539 338 aa14.96□□□□□ -0.01
GPC3-201ENST00000370818 CAVIN4Q5BKX8 364 aa14.96□□□□□ -0.01
GPC3-201ENST00000370818 FBXO33Q7Z6M2 555 aa14.96□□□□□ -0.01
GPC3-201ENST00000370818 RAB11FIP4Q86YS3 637 aa14.96□□□□□ -0.01
GPC3-201ENST00000370818 PDCL2Q8N4E4 241 aa14.96□□□□□ -0.01
GPC3-201ENST00000370818 CHMP4CQ96CF2 233 aa14.96□□□□□ -0.01
GPC3-201ENST00000370818 ANGEL1Q9UNK9 670 aaKnown RBP14.96□□□□□ -0.01
GPC3-201ENST00000370818 SH2B2O14492 632 aaPredicted RBP14.96□□□□□ -0.01
GPC3-201ENST00000370818 GNAT2P19087 354 aa14.96□□□□□ -0.01
GPC3-201ENST00000370818 ADD1P35611 737 aaKnown RBP14.96□□□□□ -0.01
GPC3-201ENST00000370818 CTDSPL2Q05D32 466 aa14.96□□□□□ -0.01
GPC3-201ENST00000370818 SPATA32Q96LK8 384 aa14.96□□□□□ -0.01
GPC3-201ENST00000370818 ZNF830Q96NB3 372 aaPredicted RBP14.96□□□□□ -0.01
GPC3-201ENST00000370818 TSPY26PQ9H489 355 aa14.96□□□□□ -0.01
GPC3-201ENST00000370818 SLC4A4Q9Y6R1 1079 aa14.96□□□□□ -0.01
GPC3-201ENST00000370818 C4AP0C0L4 1744 aa14.95□□□□□ -0.02
GPC3-201ENST00000370818 NFIXQ14938 502 aa14.95□□□□□ -0.02
GPC3-201ENST00000370818 SENP2Q9HC62 589 aa14.95□□□□□ -0.02
GPC3-201ENST00000370818 CYP7A1P22680 504 aa14.95□□□□□ -0.02
GPC3-201ENST00000370818 VPS37DQ86XT2 251 aa14.95□□□□□ -0.02
GPC3-201ENST00000370818 IGDCC4Q8TDY8 1250 aa14.95□□□□□ -0.02
GPC3-201ENST00000370818 ZNF384Q8TF68 577 aa14.95□□□□□ -0.02
GPC3-201ENST00000370818 RAI14Q9P0K7 980 aa14.94□□□□□ -0.02
GPC3-201ENST00000370818 DHX16O60231 1041 aaKnown RBP14.94□□□□□ -0.02
GPC3-201ENST00000370818 GUCY1B3Q02153 619 aa14.94□□□□□ -0.02
GPC3-201ENST00000370818 AKNAD1Q5T1N1 836 aa14.94□□□□□ -0.02
GPC3-201ENST00000370818 ILDR1Q86SU0 546 aaPredicted RBP14.94□□□□□ -0.02
GPC3-201ENST00000370818 MPNDQ8N594 471 aa14.94□□□□□ -0.02
GPC3-201ENST00000370818 ZSWIM5Q9P217 1185 aa14.94□□□□□ -0.02
GPC3-201ENST00000370818 TNRC6CQ9HCJ0 1690 aaKnown RBP14.94□□□□□ -0.02
GPC3-201ENST00000370818 LIG1P18858 919 aa14.93□□□□□ -0.02
GPC3-201ENST00000370818 U2AF2P26368 475 aaKnown RBP eCLIP14.93□□□□□ -0.022e-8■■□□□ 13.1
GPC3-201ENST00000370818 PGBD1Q96JS3 809 aa14.93□□□□□ -0.02
GPC3-201ENST00000370818 TMEM87BQ96K49 555 aa14.93□□□□□ -0.02
GPC3-201ENST00000370818 RIOK1Q9BRS2 568 aaKnown RBP14.93□□□□□ -0.02
GPC3-201ENST00000370818 NACAP1Q9BZK3 213 aa14.93□□□□□ -0.02
GPC3-201ENST00000370818 ANKRD2Q9GZV1 360 aa14.93□□□□□ -0.02
GPC3-201ENST00000370818 QTRT2Q9H974 415 aaKnown RBP14.93□□□□□ -0.02
GPC3-201ENST00000370818 LY9Q9HBG7 655 aa14.93□□□□□ -0.02
GPC3-201ENST00000370818 SPTLC3Q9NUV7 552 aa14.93□□□□□ -0.02
GPC3-201ENST00000370818 CGNQ9P2M7 1197 aaKnown RBP14.93□□□□□ -0.02
GPC3-201ENST00000370818 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.93□□□□□ -0.02
GPC3-201ENST00000370818 VGLL3A8MV65 326 aa14.93□□□□□ -0.02
GPC3-201ENST00000370818 TDO2P48775 406 aa14.93□□□□□ -0.02
GPC3-201ENST00000370818 APOA5Q6Q788 366 aa14.93□□□□□ -0.02
GPC3-201ENST00000370818 SLC51AQ86UW1 340 aa14.93□□□□□ -0.02
GPC3-201ENST00000370818 C17orf53Q8N3J3 647 aaPredicted RBP14.93□□□□□ -0.02
GPC3-201ENST00000370818 TFCP2L1Q9NZI6 479 aa14.93□□□□□ -0.02
GPC3-201ENST00000370818 TIAM2Q8IVF5 1701 aa14.93□□□□□ -0.02
GPC3-201ENST00000370818 CACNA1SQ13698 1873 aa14.93□□□□□ -0.02
GPC3-201ENST00000370818 ZBTB22O15209 634 aa14.92□□□□□ -0.02
GPC3-201ENST00000370818 KDM4AO75164 1064 aa14.92□□□□□ -0.02
GPC3-201ENST00000370818 GIMAP6Q6P9H5 292 aa14.92□□□□□ -0.02
GPC3-201ENST00000370818 SDR42E1Q8WUS8 393 aa14.92□□□□□ -0.02
GPC3-201ENST00000370818 STAG1Q8WVM7 1258 aa14.92□□□□□ -0.02
GPC3-201ENST00000370818 ANKRD7Q92527 254 aa14.92□□□□□ -0.02
GPC3-201ENST00000370818 FUCA2Q9BTY2 467 aa14.92□□□□□ -0.02
GPC3-201ENST00000370818 FTOQ9C0B1 505 aaKnown RBP eCLIP14.92□□□□□ -0.02
GPC3-201ENST00000370818 IRS2Q9Y4H2 1338 aa14.92□□□□□ -0.02
GPC3-201ENST00000370818 MAGEB6P1A0A0J9YX57 407 aa14.92□□□□□ -0.02
GPC3-201ENST00000370818 CPLX1O14810 134 aa14.92□□□□□ -0.02
GPC3-201ENST00000370818 SEMA3EO15041 775 aa14.92□□□□□ -0.02
GPC3-201ENST00000370818 ADRA2BP18089 450 aa14.92□□□□□ -0.02
GPC3-201ENST00000370818 OTUD7BQ6GQQ9 843 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms