RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 TBC1D5Q92609 795 aa12.22□□□□□ -0.45
PTPRK-205ENST00000368213 LEMD3Q9Y2U8 911 aa12.22□□□□□ -0.45
PTPRK-205ENST00000368213 NPC1L1Q9UHC9 1359 aa12.22□□□□□ -0.45
PTPRK-205ENST00000368213 CFBP00751 764 aa12.22□□□□□ -0.45
PTPRK-205ENST00000368213 HARSP12081 509 aaKnown RBP12.22□□□□□ -0.45
PTPRK-205ENST00000368213 SYKP43405 635 aa12.22□□□□□ -0.45
PTPRK-205ENST00000368213 SETQ01105 290 aaPredicted RBP12.22□□□□□ -0.45
PTPRK-205ENST00000368213 CIAPIN1Q6FI81 312 aa12.22□□□□□ -0.45
PTPRK-205ENST00000368213 NCAPG2Q86XI2 1143 aa12.22□□□□□ -0.45
PTPRK-205ENST00000368213 PIGBQ92521 554 aa12.22□□□□□ -0.45
PTPRK-205ENST00000368213 SPATA31A6Q5VVP1 1343 aa12.22□□□□□ -0.45
PTPRK-205ENST00000368213 YEATS4O95619 227 aa12.22□□□□□ -0.45
PTPRK-205ENST00000368213 CCDC172P0C7W6 258 aa12.22□□□□□ -0.45
PTPRK-205ENST00000368213 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.22□□□□□ -0.45
PTPRK-205ENST00000368213 HS2ST1Q7LGA3 356 aa12.22□□□□□ -0.45
PTPRK-205ENST00000368213 PREX2Q70Z35 1606 aa12.22□□□□□ -0.45
PTPRK-205ENST00000368213 TOP1P11387 765 aaKnown RBP12.22□□□□□ -0.45
PTPRK-205ENST00000368213 BTDP43251 543 aa12.22□□□□□ -0.45
PTPRK-205ENST00000368213 CCDC183Q5T5S1 534 aa12.22□□□□□ -0.45
PTPRK-205ENST00000368213 CCDC117Q8IWD4 279 aaPredicted RBP12.22□□□□□ -0.45
PTPRK-205ENST00000368213 CPLX3Q8WVH0 158 aa12.22□□□□□ -0.45
PTPRK-205ENST00000368213 DDX19AQ9NUU7 478 aaKnown RBP12.22□□□□□ -0.45
PTPRK-205ENST00000368213 TRIM35Q9UPQ4 493 aa12.22□□□□□ -0.45
PTPRK-205ENST00000368213 COMMD10Q9Y6G5 202 aa12.22□□□□□ -0.45
PTPRK-205ENST00000368213 GCC2Q8IWJ2 1684 aa12.22□□□□□ -0.45
PTPRK-205ENST00000368213 BLMP54132 1417 aaPredicted RBP12.22□□□□□ -0.45
PTPRK-205ENST00000368213 BCAMP50895 628 aa12.22□□□□□ -0.45
PTPRK-205ENST00000368213 DDX39AO00148 427 aaKnown RBP12.21□□□□□ -0.45
PTPRK-205ENST00000368213 ISM2Q6H9L7 571 aa12.21□□□□□ -0.45
PTPRK-205ENST00000368213 ARPP21Q9UBL0 812 aaPredicted RBP12.21□□□□□ -0.45
PTPRK-205ENST00000368213 CTDSPL2Q05D32 466 aa12.21□□□□□ -0.45
PTPRK-205ENST00000368213 C21orf2O43822 256 aa12.21□□□□□ -0.45
PTPRK-205ENST00000368213 GIGYF2Q6Y7W6 1299 aaKnown RBP12.21□□□□□ -0.45
PTPRK-205ENST00000368213 DTHD1Q6ZMT9 781 aa12.21□□□□□ -0.45
PTPRK-205ENST00000368213 MASTLQ96GX5 879 aa12.21□□□□□ -0.45
PTPRK-205ENST00000368213 PRKAG2Q9UGJ0 569 aa12.21□□□□□ -0.45
PTPRK-205ENST00000368213 PER1O15534 1290 aaPredicted RBP12.21□□□□□ -0.46
PTPRK-205ENST00000368213 OSBPP22059 807 aa12.21□□□□□ -0.46
PTPRK-205ENST00000368213 CCNA1P78396 465 aa12.21□□□□□ -0.46
PTPRK-205ENST00000368213 CERKLQ49MI3 558 aaPredicted RBP12.21□□□□□ -0.46
PTPRK-205ENST00000368213 KCNG4Q8TDN1 519 aa12.21□□□□□ -0.46
PTPRK-205ENST00000368213 TMEM87BQ96K49 555 aa12.21□□□□□ -0.46
PTPRK-205ENST00000368213 NBPF3Q9H094 633 aa12.21□□□□□ -0.46
PTPRK-205ENST00000368213 KDRP35968 1356 aa12.21□□□□□ -0.46
PTPRK-205ENST00000368213 ABCC3O15438 1527 aa12.21□□□□□ -0.46
PTPRK-205ENST00000368213 SYCE3A1L190 88 aa12.21□□□□□ -0.46
PTPRK-205ENST00000368213 DNM2P50570 870 aa12.21□□□□□ -0.46
PTPRK-205ENST00000368213 TFAP4Q01664 338 aa12.21□□□□□ -0.46
PTPRK-205ENST00000368213 IL27Q8NEV9 243 aa12.21□□□□□ -0.46
PTPRK-205ENST00000368213 IFT74Q96LB3 600 aa12.21□□□□□ -0.46
PTPRK-205ENST00000368213 MRVI1Q9Y6F6 885 aa12.21□□□□□ -0.46
PTPRK-205ENST00000368213 IBTKQ9P2D0 1353 aaPredicted RBP12.2□□□□□ -0.46
PTPRK-205ENST00000368213 MARCKSP29966 332 aaPredicted RBP12.2□□□□□ -0.46
PTPRK-205ENST00000368213 USO1O60763 962 aaKnown RBP12.2□□□□□ -0.46
PTPRK-205ENST00000368213 DNA2P51530 1060 aa12.2□□□□□ -0.46
PTPRK-205ENST00000368213 ZNF710Q8N1W2 664 aa12.2□□□□□ -0.46
PTPRK-205ENST00000368213 GREM2Q9H772 168 aa12.2□□□□□ -0.46
PTPRK-205ENST00000368213 PRR36Q9H6K5 1346 aa12.2□□□□□ -0.46
PTPRK-205ENST00000368213 PABPN1LA6NDY0 278 aaKnown RBP12.2□□□□□ -0.46
PTPRK-205ENST00000368213 MKRN3Q13064 507 aaKnown RBP12.2□□□□□ -0.46
PTPRK-205ENST00000368213 RNF181Q9P0P0 153 aa12.2□□□□□ -0.46
PTPRK-205ENST00000368213 CCDC169A6NNP5 214 aa12.2□□□□□ -0.46
PTPRK-205ENST00000368213 DPP9Q86TI2 863 aa12.2□□□□□ -0.46
PTPRK-205ENST00000368213 ANKRD35Q8N283 1001 aa12.2□□□□□ -0.46
PTPRK-205ENST00000368213 ZBTB40Q9NUA8 1239 aa12.2□□□□□ -0.46
PTPRK-205ENST00000368213 ATP7BP35670 1465 aa12.2□□□□□ -0.46
PTPRK-205ENST00000368213 RPS6KA4O75676 772 aa12.19□□□□□ -0.46
PTPRK-205ENST00000368213 ALAS1P13196 640 aa12.19□□□□□ -0.46
PTPRK-205ENST00000368213 SMTNP53814 917 aa12.19□□□□□ -0.46
PTPRK-205ENST00000368213 R3HDM1Q15032 1099 aaKnown RBP12.19□□□□□ -0.46
PTPRK-205ENST00000368213 SLC27A3Q5K4L6 730 aa12.19□□□□□ -0.46
PTPRK-205ENST00000368213 TMX3Q96JJ7 454 aa12.19□□□□□ -0.46
PTPRK-205ENST00000368213 SFPQP23246 707 aaKnown RBP eCLIP12.19□□□□□ -0.464e-7■□□□□ 11
PTPRK-205ENST00000368213 FAM43AQ8N2R8 423 aa12.19□□□□□ -0.46
PTPRK-205ENST00000368213 SPAG5Q96R06 1193 aa12.19□□□□□ -0.46
PTPRK-205ENST00000368213 IREB2P48200 963 aaKnown RBP12.19□□□□□ -0.46
PTPRK-205ENST00000368213 ADCY7P51828 1080 aa12.19□□□□□ -0.46
PTPRK-205ENST00000368213 KBTBD3Q8NAB2 608 aa12.19□□□□□ -0.46
PTPRK-205ENST00000368213 DHX58Q96C10 678 aa12.19□□□□□ -0.46
PTPRK-205ENST00000368213 GDPD2Q9HCC8 539 aa12.19□□□□□ -0.46
PTPRK-205ENST00000368213 FLOT1O75955 427 aa12.19□□□□□ -0.46
PTPRK-205ENST00000368213 RLBP1P12271 317 aa12.19□□□□□ -0.46
PTPRK-205ENST00000368213 UBE4AQ14139 1066 aa12.19□□□□□ -0.46
PTPRK-205ENST00000368213 AXDND1Q5T1B0 1012 aaPredicted RBP12.19□□□□□ -0.46
PTPRK-205ENST00000368213 C2orf69Q8N8R5 385 aa12.19□□□□□ -0.46
PTPRK-205ENST00000368213 CCDC112Q8NEF3 446 aa12.19□□□□□ -0.46
PTPRK-205ENST00000368213 MLXIPQ9HAP2 919 aa12.19□□□□□ -0.46
PTPRK-205ENST00000368213 GLG1Q92896 1179 aa12.19□□□□□ -0.46
PTPRK-205ENST00000368213 CENPHQ9H3R5 247 aa12.19□□□□□ -0.46
PTPRK-205ENST00000368213 NDUFB9Q9Y6M9 179 aa12.19□□□□□ -0.46
PTPRK-205ENST00000368213 KDM5AP29375 1690 aaKnown RBP12.18□□□□□ -0.46
PTPRK-205ENST00000368213 CCT6AP40227 531 aaKnown RBP12.18□□□□□ -0.46
PTPRK-205ENST00000368213 TXNRD1Q16881 649 aa12.18□□□□□ -0.46
PTPRK-205ENST00000368213 GNPTABQ3T906 1256 aa12.18□□□□□ -0.46
PTPRK-205ENST00000368213 FAM47AQ5JRC9 791 aa12.18□□□□□ -0.46
PTPRK-205ENST00000368213 NLRX1Q86UT6 975 aa12.18□□□□□ -0.46
PTPRK-205ENST00000368213 TAX1BP1Q86VP1 789 aa12.18□□□□□ -0.46
PTPRK-205ENST00000368213 TNS3Q68CZ2 1445 aa12.18□□□□□ -0.46
PTPRK-205ENST00000368213 STRN3Q13033 797 aa12.18□□□□□ -0.46
PTPRK-205ENST00000368213 ARHGEF16Q5VV41 709 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms