RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 LRRC27Q9C0I9 530 aa8.08□□□□□ -1.12
RAB5B-201ENST00000360299 ZNF804BA4D1E1 1349 aa8.08□□□□□ -1.12
RAB5B-201ENST00000360299 KDRP35968 1356 aa8.08□□□□□ -1.12
RAB5B-201ENST00000360299 KIF2AO00139 706 aaPredicted RBP8.08□□□□□ -1.12
RAB5B-201ENST00000360299 GYG1P46976 350 aa8.08□□□□□ -1.12
RAB5B-201ENST00000360299 ZNF157P51786 506 aaPredicted RBP8.08□□□□□ -1.12
RAB5B-201ENST00000360299 AMPD3Q01432 767 aa8.08□□□□□ -1.12
RAB5B-201ENST00000360299 GRAPQ13588 217 aa8.08□□□□□ -1.12
RAB5B-201ENST00000360299 HSP90AA2PQ14568 343 aaPredicted RBP8.08□□□□□ -1.12
RAB5B-201ENST00000360299 EP400NLQ6ZTU2 488 aa8.08□□□□□ -1.12
RAB5B-201ENST00000360299 ILDR2Q71H61 639 aa8.08□□□□□ -1.12
RAB5B-201ENST00000360299 MICU3Q86XE3 530 aa8.08□□□□□ -1.12
RAB5B-201ENST00000360299 GRAPLQ8TC17 118 aaPredicted RBP8.08□□□□□ -1.12
RAB5B-201ENST00000360299 ERCC4Q92889 916 aaPredicted RBP8.08□□□□□ -1.12
RAB5B-201ENST00000360299 SH2D4AQ9H788 454 aa8.08□□□□□ -1.12
RAB5B-201ENST00000360299 PRM3Q9NNZ6 103 aa8.08□□□□□ -1.12
RAB5B-201ENST00000360299 RDXP35241 583 aaKnown RBP8.08□□□□□ -1.12
RAB5B-201ENST00000360299 ODF2Q5BJF6 829 aa8.08□□□□□ -1.12
RAB5B-201ENST00000360299 SUSD4Q5VX71 490 aa8.08□□□□□ -1.12
RAB5B-201ENST00000360299 CLEC4GQ6UXB4 293 aa8.08□□□□□ -1.12
RAB5B-201ENST00000360299 KLHDC4Q8TBB5 520 aa8.08□□□□□ -1.12
RAB5B-201ENST00000360299 SEC31BQ9NQW1 1179 aa8.08□□□□□ -1.12
RAB5B-201ENST00000360299 TCP11L1Q9NUJ3 509 aa8.08□□□□□ -1.12
RAB5B-201ENST00000360299 MYO6Q9UM54 1294 aa8.08□□□□□ -1.12
RAB5B-201ENST00000360299 A0A1B0GUL7 405 aa8.08□□□□□ -1.12
RAB5B-201ENST00000360299 USP17L3A6NCW0 530 aa8.08□□□□□ -1.12
RAB5B-201ENST00000360299 USP17L4A6NCW7 530 aa8.08□□□□□ -1.12
RAB5B-201ENST00000360299 USP17L8P0C7I0 530 aa8.08□□□□□ -1.12
RAB5B-201ENST00000360299 ZNF853P0CG23 659 aa8.08□□□□□ -1.12
RAB5B-201ENST00000360299 CYP19A1P11511 503 aaPredicted RBP8.08□□□□□ -1.12
RAB5B-201ENST00000360299 USP17L1Q7RTZ2 530 aa8.08□□□□□ -1.12
RAB5B-201ENST00000360299 CDR1P51861 262 aa8.07□□□□□ -1.12
RAB5B-201ENST00000360299 RTN1Q16799 776 aa8.07□□□□□ -1.12
RAB5B-201ENST00000360299 IFIT1BQ5T764 474 aaKnown RBP8.07□□□□□ -1.12
RAB5B-201ENST00000360299 TMEM106CQ9BVX2 250 aa8.07□□□□□ -1.12
RAB5B-201ENST00000360299 GPHNQ9NQX3 736 aaPredicted RBP8.07□□□□□ -1.12
RAB5B-201ENST00000360299 KIF20BQ96Q89 1820 aa8.07□□□□□ -1.12
RAB5B-201ENST00000360299 RTL9Q8NET4 1388 aa8.07□□□□□ -1.12
RAB5B-201ENST00000360299 NEURL1BA8MQ27 555 aa8.07□□□□□ -1.12
RAB5B-201ENST00000360299 CELF2O95319 508 aaKnown RBP8.07□□□□□ -1.12
RAB5B-201ENST00000360299 VEGFAP15692 232 aaPredicted RBP8.07□□□□□ -1.12
RAB5B-201ENST00000360299 PABPC4Q13310 644 aaKnown RBP eCLIP8.07□□□□□ -1.12
RAB5B-201ENST00000360299 FSIP1Q8NA03 581 aa8.07□□□□□ -1.12
RAB5B-201ENST00000360299 CNNM3Q8NE01 707 aa8.07□□□□□ -1.12
RAB5B-201ENST00000360299 LPIN2Q92539 896 aa8.07□□□□□ -1.12
RAB5B-201ENST00000360299 ZHX3Q9H4I2 956 aa8.07□□□□□ -1.12
RAB5B-201ENST00000360299 AS3MTQ9HBK9 375 aa8.07□□□□□ -1.12
RAB5B-201ENST00000360299 MKRN1Q9UHC7 482 aaKnown RBP8.07□□□□□ -1.12
RAB5B-201ENST00000360299 MROH5Q6ZUA9 1318 aa8.07□□□□□ -1.12
RAB5B-201ENST00000360299 NEMFO60524 1076 aa8.07□□□□□ -1.12
RAB5B-201ENST00000360299 SSBP05455 408 aaKnown RBP eCLIP8.07□□□□□ -1.12
RAB5B-201ENST00000360299 MATR3P43243 847 aaKnown RBP eCLIP8.07□□□□□ -1.121e-7■■■□□ 16.9
RAB5B-201ENST00000360299 CHRNDQ07001 517 aa8.07□□□□□ -1.12
RAB5B-201ENST00000360299 PDE4CQ08493 712 aa8.07□□□□□ -1.12
RAB5B-201ENST00000360299 TEX35Q5T0J7 233 aa8.07□□□□□ -1.12
RAB5B-201ENST00000360299 RUFY3Q7L099 469 aa8.07□□□□□ -1.12
RAB5B-201ENST00000360299 APPBP2Q92624 585 aa8.07□□□□□ -1.12
RAB5B-201ENST00000360299 SUCLG2Q96I99 432 aa8.07□□□□□ -1.12
RAB5B-201ENST00000360299 USP44Q9H0E7 712 aa8.07□□□□□ -1.12
RAB5B-201ENST00000360299 SLIT1O75093 1534 aa8.07□□□□□ -1.12
RAB5B-201ENST00000360299 B4DLN1 442 aa8.07□□□□□ -1.12
RAB5B-201ENST00000360299 MRPL12P52815 198 aaKnown RBP8.07□□□□□ -1.12
RAB5B-201ENST00000360299 RASSF7Q02833 373 aa8.07□□□□□ -1.12
RAB5B-201ENST00000360299 HLFQ16534 295 aa8.07□□□□□ -1.12
RAB5B-201ENST00000360299 Q6ZUG5 572 aa8.07□□□□□ -1.12
RAB5B-201ENST00000360299 CCDC82Q8N4S0 544 aa8.07□□□□□ -1.12
RAB5B-201ENST00000360299 KBTBD3Q8NAB2 608 aa8.07□□□□□ -1.12
RAB5B-201ENST00000360299 SLC26A6Q9BXS9 759 aa8.07□□□□□ -1.12
RAB5B-201ENST00000360299 ERVV-1B6SEH8 477 aa8.06□□□□□ -1.12
RAB5B-201ENST00000360299 PRC1O43663 620 aa8.06□□□□□ -1.12
RAB5B-201ENST00000360299 CALML3P27482 149 aa8.06□□□□□ -1.12
RAB5B-201ENST00000360299 CCDC102BQ68D86 513 aa8.06□□□□□ -1.12
RAB5B-201ENST00000360299 ARHGEF10LQ9HCE6 1279 aa8.06□□□□□ -1.12
RAB5B-201ENST00000360299 AATFQ9NY61 560 aaKnown RBP eCLIP8.06□□□□□ -1.12
RAB5B-201ENST00000360299 SGSM2O43147 1006 aa8.06□□□□□ -1.12
RAB5B-201ENST00000360299 ECE2O60344 883 aa8.06□□□□□ -1.12
RAB5B-201ENST00000360299 ITPK1Q13572 414 aa8.06□□□□□ -1.12
RAB5B-201ENST00000360299 PROSER3Q2NL68 480 aa8.06□□□□□ -1.12
RAB5B-201ENST00000360299 GTPBP4Q9BZE4 634 aaKnown RBP8.06□□□□□ -1.12
RAB5B-201ENST00000360299 ATP5JP18859 108 aa8.06□□□□□ -1.12
RAB5B-201ENST00000360299 ECE1P42892 770 aa8.06□□□□□ -1.12
RAB5B-201ENST00000360299 HUNKP57058 714 aa8.06□□□□□ -1.12
RAB5B-201ENST00000360299 GUCY1B3Q02153 619 aa8.06□□□□□ -1.12
RAB5B-201ENST00000360299 RC3H1Q5TC82 1133 aaKnown RBP8.06□□□□□ -1.12
RAB5B-201ENST00000360299 PNMA8AQ86V59 439 aaPredicted RBP8.06□□□□□ -1.12
RAB5B-201ENST00000360299 SPC24Q8NBT2 197 aa8.06□□□□□ -1.12
RAB5B-201ENST00000360299 TSG101Q99816 390 aa8.06□□□□□ -1.12
RAB5B-201ENST00000360299 ALG1Q9BT22 464 aa8.06□□□□□ -1.12
RAB5B-201ENST00000360299 GREM2Q9H772 168 aa8.06□□□□□ -1.12
RAB5B-201ENST00000360299 PLSCR1O15162 318 aa8.06□□□□□ -1.12
RAB5B-201ENST00000360299 PCCAP05165 728 aaPredicted RBP8.06□□□□□ -1.12
RAB5B-201ENST00000360299 TGFB2P61812 414 aa8.06□□□□□ -1.12
RAB5B-201ENST00000360299 TIMM10P62072 90 aa8.06□□□□□ -1.12
RAB5B-201ENST00000360299 PPP2R5BQ15173 497 aa8.06□□□□□ -1.12
RAB5B-201ENST00000360299 MAPKAPK5Q8IW41 473 aa8.06□□□□□ -1.12
RAB5B-201ENST00000360299 ZNF397Q8NF99 534 aaPredicted RBP8.06□□□□□ -1.12
RAB5B-201ENST00000360299 CALML4Q96GE6 196 aa8.06□□□□□ -1.12
RAB5B-201ENST00000360299 TMEM87BQ96K49 555 aa8.06□□□□□ -1.12
RAB5B-201ENST00000360299 DEF6Q9H4E7 631 aa8.06□□□□□ -1.12
RAB5B-201ENST00000360299 ESPNB1AK53 854 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms